ライフサイエンスコーパス: O. sativa

1 from neutral evolution was not found in all O. sativa groups.

2 Based on this geographical analysis, O. sativa indica was domesticated within a region south

3 s produced in the roots of B. distachyon and O. sativa.

4 s was examined more detailed in A. majus and O. sativa.

5 s between Oryza rufipogon (red pericarp) and O. sativa cv Jefferson (white pericarp).

6 4-19 Mb) between the three Oryza species and O. sativa.

7 tment of S. lycopersicum, M. truncatula, and O. sativa roots with concentrations of synthetic auxin a

8 ry relationships of Pi-ta haplotypes between O. sativa and O. rufipogon.

9 ient for root hair development in the cereal O. sativa (rice).

10 kdown in a cross between "widely compatible" O. sativa ssp. japonica cultivar Lemont from the Souther

11 ication alleles are common to all cultivated O. sativa varieties.

12 Despite being a true diploid, O. sativa has at least two R genes.

13 in the whole-genome sequences available for O. sativa (AA), O. glaberrima (AA), and O. brachyantha (

14 annotated 36.1 Mb ( approximately 97%) from O. sativa subsp. japonica cv Nipponbare.

15 a and Oryza brachyantha, which diverged from O. sativa 1 and 10 million years ago, respectively, reve

16 neration of deep-coverage BAC libraries from O. sativa ssp. japonica c.v. Nipponbare and the sequenci

17 p to 42 degrees C, contrasting with RCA from O. sativa, which was inhibited at 36 degrees C.

18 approximately 450-kb region from AA genome, O. sativa L. ssp. japonica.

19 uencing Project's finished reference genome--O. sativa ssp. japonica c.v. Nipponbare.

20 k for the molecular analysis of diversity in O. sativa.

21 ow that there are three RSL class I genes in O. sativa and that each is expressed in developing root

22 NATs may form complex regulatory networks in O. sativa.

23 e investigation of NAT-derived small RNAs in O. sativa.

24 photosynthetic rate was almost 50% slower in O. sativa at 45 degrees C than at 28 degrees C, while in

25 ariation in flanking regions around Pi-ta in O. sativa suggest that the size of the resistant Pi-ta i

26 ssion of Sub1A-1 in a submergence-intolerant O. sativa ssp. japonica conferred enhanced tolerance to

27 NP variants across 413 diverse accessions of O. sativa collected from 82 countries that were systemat

28 or is ubiquitous among the wild ancestors of O. sativa, in which it is closely associated with seed s

29 ucted using meiotic pachytene chromosomes of O. sativa spp. japonica rice var. Nipponbare.

30 ogy are consistent with the domestication of O. sativa japonica in the Yangtze River valley of southe

31 pogon, suggesting multiple domestications of O. sativa.

32 opulations clustered with control samples of O. sativa, subspecies indica and japonica, indicating th

33 Using the sequence of O. sativa subsp. japonica cv Nipponbare from the Interna

34 a was estimated to be 8% larger than that of O. sativa with individual chromosome differences of 1.5-

35 or-like transmembrane protein kinase, OsTMK (O. sativa transmembrane kinase).

36 ablished and is in the process of sequencing O. sativa spp. japonica var "Nipponbare" using a bacteri

37 RSL class I genes have been conserved since O. sativa and A. thaliana last shared a common ancestor.

38 s composed of seven AA genome Oryza species: O. sativa, O. rufipogon, O. nivara, O. meridionalis, O.

39 t v2 can use genes of the related subspecies O. sativa ssp. indica and the reference plant Arabidopsi

40 A few cultivars, such as the O. sativa ssp. indica cultivar FR13A, are highly toleran

41 % of the punctata FPC map covered 98% of the O. sativa genome sequence.

42 in O. rufipogon (<<40 kb) than in any of the O. sativa groups assayed here.

43 ces (BESs) and 34,224 fingerprints, onto the O. sativa genome sequence.

44 data from paired-end clone alignments to the O. sativa reference genome and physical maps.

45 We also examined how useful the O. sativa genome and ESTs from other species are, compar

46 f DNA TEs in O. brachyantha is comparable to O. sativa; however, the density of RNA TEs is dramatical

47 a set of O. glaberrima genes orthologous to O. sativa genes that are known to be associated with dom

48 This catalog of confirmed SV in reference to O. sativa provides an entry point for future research in

49 ons in the Oryza species genomes relative to O. sativa by combining data from paired-end clone alignm

50 In the expanded regions unique to O. sativa we found enrichment in transposable elements (

51 plant proteomes (A. thaliana, M. truncatula, O. sativa, and P. trichocarpa), and analyzed using vario

52 astern India, Myanmar, and Thailand, whereas O. sativa japonica was domesticated from wild rice in so

53 lated O. brachyantha shares colinearity with O. sativa, offering opportunities to use comparative gen