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1 OMP islands were distributed throughout the cell and con
2 OMPs are implicated in the maintenance of cell envelope
3 OMPs clustered to form approximately 0.5-mum diameter is
4 ve OMPs from the avian strain genome and 107 OMPs from the porcine strain genome with 83% overlap bet
5 ns serovar Copenhageni strain Fiocruz L1-130 OMP microarray containing all predicted lipoproteins and
6 stigated the transformation mechanisms of 20 OMPs during the methanogenic step of AD with a focus on
7 tral subunit of the BAM complex, accelerates OMP folding by lowering the kinetic barrier imposed by p
9 gher cross-reactive immune responses against OMPs isolated from S. Choleraesuis and S. Enteritidis.
12 -depth characterization of methylation of an OMP at the molecular level and may lead to uncovering th
14 sults suggest that the folding process of an OMP is driven by the lipid-facing residues in its hydrop
17 These results reveal that OSNs undergo an OMP-dependent functional maturation process that coincid
18 in of BamA improve both bacterial growth and OMP biogenesis in a bamB bamE mutant and restore BamA le
19 A. baumannii infection, but monoclonal anti-OMP antibodies have not been developed, and their potent
23 expand our earlier finding that few VSNs are OMP (+) in Saguinus geoffroyi to other species of the ge
29 vestigating the folding of several bacterial OMPs using membranes with naturally occurring Escherichi
30 cherichia coli, BamA is the core beta-barrel OMP and, together with four outer membrane lipoproteins,
31 ts expressing either a defective beta-barrel OMP assembly machinery (Bam) or assembly defective beta-
32 regulon in the event of aberrant beta-barrel OMP assembly, the expression of cpxP, the archetypal mem
33 velope stress caused by aberrant beta-barrel OMP assembly, with the Cpx regulon principally contribut
34 e of Delta cpxR in mutant Bam or beta-barrel OMP backgrounds was reversed by wild type DegP expressed
36 the Cpx regulon in the event of beta-barrel OMP mis-assembly, by utilizing mutants expressing either
39 ist folding and assembly of most beta-barrel OMPs except for TolC, which folds into a unique soluble
42 e subjected to degradation, but also because OMPs that assemble slowly can form dominant-negative int
44 Here, we provide evidence that the borrelial OMP P66, a known adhesin with pore-forming activity, for
45 en of the nasal airway was positive for both OMP and the disease-specific isoform of the prion protei
46 e in the OMPs and greater divergence in both OMP sequences and the encoding locus structure between t
47 atment that leads to apoptosis of ORNs, both OMP and prion proteins were present in nasal lavage samp
48 c antibodies are borreliacidal and that both OMPs are immunogenic during nonhuman primate infection.
49 verall similarity, it is plausible that both OMPs have similar or overlapping functions in this patho
51 e complex folding environment encountered by OMPs in the periplasm and demonstrate the key role of Sk
52 K (TP0897), an extensively studied candidate OMP, and TP0136, a lipoprotein recently reported to be s
55 e of the beta barrel of the Escherichia coli OMPs OmpLA and EspP creates an energy barrier that imped
57 and deletion mutants revealed two competing OMP assembly pathways, one of which is followed by the a
63 ertion in clusters, driving the pre-existing OMP clusters towards cell poles for long-term storage.
64 OMP) deposition and the fate of pre-existing OMPs are still enigmatic despite numerous concerted effo
65 hat antibiotic resistant bacteria expressing OMP TolC could spread more widely within sandy aquifers.
68 facilitate the transfer of partially folded OMPs to the soluble POTRA (polypeptide-transport-associa
69 imeric protein encapsulates partially folded OMPs, protecting them from the aqueous environment until
78 here the molecular features responsible for OMP targeting to the mycomembrane of Corynebacterium glu
79 eting to the mycomembrane and sufficient for OMP assembly into mycolic acid-containing lipid bilayers
80 TM site sequence analysis from C. glutamicum OMP and other O-acylated proteins in bacteria and eukary
84 model for BamA function, which explains how OMP assembly can be conserved between prokaryotes and eu
87 y, BamA beta-barrel alterations also improve OMP biogenesis in cells lacking the major periplasmic ch
92 t specificity in this adaptive plasticity in OMP knock-out mice suggests a potential role for this pr
98 by utilizing two transgenic reporter lines: OMP-ZsGreen mice which express bright green fluorescent
100 ermodynamic and kinetic parameters maximizes OMP folding flux and minimizes aggregation and unnecessa
102 wever, a Deltaskp mutant displays only minor OMP assembly defects, and no OMPs have been shown to req
105 complex, on the folding kinetics of a model OMP (tOmpA) using fluorescence spectroscopy, native mass
106 atural substrate orotidine 5'-monophosphate (OMP) for orotidine 5'-monophosphate decarboxylase (OMPDC
107 carboxylation of orotidine 5'-monophosphate (OMP) in 50/50 (v/v) HOH/DOD catalyzed by orotidine 5'-mo
108 ions of [1'-(3)H]orotidine 5'-monophosphate (OMP) with the catalytic sites of Plasmodium falciparum a
111 k can also be extended to the synthesis of N-OMP/SiO2 nanocomposites, mesoporous SiO2 , crystalline m
112 itrogen-doped ordered mesoporous polymers (N-OMPs) is developed, which is realized by mixing polymer
115 um with sequence homology to a Gram-negative OMP, belongs to the BamA family of proteins essential fo
116 data from previous reports, however, neither OMP was found to bind human factor H or to be required f
117 regions as the primary entry points for new OMP insertion in clusters, driving the pre-existing OMP
119 lays only minor OMP assembly defects, and no OMPs have been shown to require Skp for their assembly.
121 the transition state for decarboxylation of OMP provided by OMPDC represents the sum of 11.8 and 10.
122 (obs) for OMPDC-catalyzed decarboxylation of OMP, and the 4 kcal/mol of binding energy, which is util
125 his research, we investigated the effects of OMP TolC on E. coli transport within saturated sands thr
126 l intrinsic phosphodianion binding energy of OMP is divided between the 8 kcal/mol of binding energy,
128 Our sample indicates that the number of OMP (+) VSNs in primates varies from ubiquitous to few w
129 ent to this loop, with the phosphodianion of OMP was probed by determining the kinetic parameters k(c
134 In sum, OMPBioM provides a global view of OMP biogenesis that yields unique insights into this ess
139 ressure against spontaneous incorporation of OMPs into inner bacterial membranes, which would dissipa
147 e passive and binary in nature, in which old OMPs are displaced to the poles of growing cells as new
150 This role may be compensated for by other OMP assembly proteins; in the absence of both Skp and Fk
151 le with mutations in genes that encode other OMP assembly factors leads to severe synthetic phenotype
154 ne-embedded BamA beta-barrel domain overcome OMP biogenesis defects that occur at the POTRA domain of
157 key role of Skp in holding aggregation-prone OMPs prior to their direct or indirect delivery to the m
158 earance of mature, olfactory marker protein (OMP) (+) olfactory neurons as compared to empty vector.
159 ledge, we examined olfactory marker protein (OMP) expression in a sample of twenty-three non-human pr
161 terozygous for the olfactory marker protein (OMP), this adaptive plasticity was strongest in the popu
162 enetic ablation of olfactory marker protein (OMP), which is exclusively expressed in mature OSNs.
163 sotoxic treatment, olfactory marker protein (OMP), which is specific for ORNs, was not detected in na
165 Borrelia burgdorferi outer membrane protein (OMP) BB0406 and found that the gene encoding this OMP wa
168 ssential beta-barrel outer membrane protein (OMP) biogenesis machinery in Gram-negative bacteria, chl
169 rily for its role in outer membrane protein (OMP) biogenesis, during which the jellyfish-like trimeri
170 The sites of new outer membrane protein (OMP) deposition and the fate of pre-existing OMPs are st
173 olyticus isolates by outer membrane protein (OMP) P6 gene sequencing is complicated by sequence varia
176 s (p44ES/msp2ES) and outer membrane protein (OMP), using DNA isolated from the blood of four naturall
180 ists in complexes with beta-barrel proteins (OMPs) allowing it to adopt a transmembrane orientation w
181 ntegral outer membrane beta-barrel proteins (OMPs) are assembled by the beta-barrel assembly machine
184 gion of outer membrane beta-barrel proteins (OMPs) by combining an empirical energy function with a r
185 stress, unassembled outer-membrane proteins (OMPs) accumulate in the periplasm and their C-terminal p
186 nces in unassembled outer-membrane proteins (OMPs) activate the AlgW protease, and unassembled lipopo
187 two key components, outer membrane proteins (OMPs) and lipopolysaccharide (LPS) and by transcribing s
188 d TprI as candidate outer membrane proteins (OMPs) and subsequently demonstrated that TprC is not onl
191 in the assembly of outer membrane proteins (OMPs) because its absence resulted in the accumulation o
192 lmost all bacterial outer membrane proteins (OMPs) contain a beta barrel domain that serves as a memb
196 onema pallidum rare outer membrane proteins (OMPs) has been a longstanding objective of syphilis rese
198 antisera targeting outer membrane proteins (OMPs) have shown encouraging results in protecting mice
200 The biogenesis of outer-membrane proteins (OMPs) in gram-negative bacteria involves delivery by per
203 tion of beta-barrel outer membrane proteins (OMPs) into the outer membrane of Gram-negative bacteria.
205 of the beta-barrel outer membrane proteins (OMPs) is an essential cellular process in Gram-negative
207 ogs predicted to be outer membrane proteins (OMPs) revealed that seven have an Msp-like bipartite str
208 (OmpA) are dominant outer membrane proteins (OMPs) that are released by gram-negative bacteria during
209 d chloroplasts have outer membrane proteins (OMPs) that perform many fundamental biological processes
210 ment of beta-barrel outer membrane proteins (OMPs) to enable adaptation to a particular habitat.
211 eract with unfolded outer membrane proteins (OMPs) to promote correct folding and membrane insertion
212 predicted to encode outer membrane proteins (OMPs), but there has been relatively little experimental
213 lymphocytes via two outer membrane proteins (OMPs), Fap2 and RadD, which share regions homologous to
214 c acids and unusual outer membrane proteins (OMPs), including those with alpha-helical structure.
215 In the case of outer-membrane proteins (OMPs), unfolded-state properties are of particular physi
219 beta-barrel-forming outer membrane proteins (OMPs): (i) surface labeling with anti-lipoidal (VDRL) an
223 ta-barrel proteins (outer-membrane proteins, OMPs) assembled into an asymmetrical lipid bilayer.
224 were able to confidently predict 98 putative OMPs from the avian strain genome and 107 OMPs from the
225 lipoprotein predictors) to identify putative OMPs from two available P. multocida genomes: those of a
226 s study has increased the number of putative OMPs identified in P. multocida and allowed these OMPs t
228 a, we conclude that TprC is a bona fide rare OMP as well as a functional ortholog of Escherichia coli
229 we generated ranked groups of candidate rare OMPs, the predicted T. pallidum outer membrane proteome
231 ese mutations we demonstrate that these RcsF/OMP complexes are required for sensing OM outer leaflet
233 Yet no mechanism is known for replacing OMPs in the outer membrane, an issue that is further con
237 stochastic methods, we are able to simulate OMP biogenesis under varying genetic conditions, each of
241 C-catalyzed reactions of the whole substrate OMP and the substrate pieces (1-beta-D-erythrofuranosyl)
242 the barrel lumen, which indicates substrate OMPs may not be threaded through the barrel during bioge
244 e N-terminal domains of protease-susceptible OMPs are exported through an autotransporter pathway.
254 essential components of this complex are the OMP BamA [which contains a carboxyl-terminal beta-barrel
255 dies are required to refine conclusions, the OMP's chemical structure was a determinant for AK action
256 iated by a protein complex that contains the OMP BamA and four associated lipoproteins (BamBCDE).
260 beta and TNF-alpha by IHC was highest in the OMP group at day 1, with progressive reduction thereafte
262 us, our findings suggest that opening of the OMP via interaction with the MFP is energy-independent,
269 was significantly greater divergence in the OMPs and greater divergence in both OMP sequences and th
272 identified in P. multocida and allowed these OMPs to be identified with a higher degree of confidence
273 Here, we characterize the roles of these OMPs in pathogenesis during bacteremia caused by Klebsie
274 BB0406 and found that the gene encoding this OMP was cotranscribed with the gene encoding the OMP BB0
275 orin and integrin-binding activities of this OMP as they relate to B. burgdorferi physiology and Lyme
277 of the deduced amino acid sequences of Tr1, OMP-1X, and P44/Msp2 proteins from A. platys with those
280 ies established that inactivation of the two OMPs led to significantly reduced ability to trigger cel
283 Here we uncover the process underpinning OMP turnover in E. coli and show it to be passive and bi
284 lifetime in the periplasm where an unfolded OMP makes, on average, hundreds of short-lived interacti
286 for entropically favored binding of unfolded OMPs to chaperones and, by facilitating conformational s
287 It has been shown to interact with unfolded OMPs, and the simultaneous loss of Skp and the main peri
288 are disfavored not only because unintegrated OMPs are subjected to degradation, but also because OMPs
290 ed on the NA gene signatures, we used Visual-OMP to design primers with optimal hybridization affinit
291 To better understand the mechanisms by which OMP precursors were sorted in C. glutamicum, we first in
294 studies on OMP biogenesis, it is unclear why OMPs require assembly machineries to fold into their nat
297 Finally, we targeted the Wnt pathway with OMP-18R5, a therapeutic antibody that interacts with mul
298 ients for the wild-type E. coli strain (with OMP TolC) was usually >50% lower than those of the tolC-
299 s using a wild-type E. coli K12 strain (with OMP TolC), as well as the corresponding transposon mutan
300 ive vaccine-induced antibody overlapped with OMPs that were immunogenic in animals vaccinated with in
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