ライフサイエンスコーパス: Physarum

1 discovery of nucleotide deletion editing in Physarum.

2 op of tRNALys from Didymium and tRNAGlu from Physarum.

3 Analogous tRNAs in Physarum and Didymium have editing sites at different lo

4 ost, gained, or both since the divergence of Physarum and Didymium.

5 g and resembles the mRNA and rRNA editing in Physarum and Didymium.

6 We have cloned the cDNA for the mtRNAP of Physarum and have expressed the mtRNAP in Escherichia co

7 ertion editing found in the mitochondrion of Physarum, (c) the C-to-U substitution editing of the mam

8 determined full transcriptome information of Physarum dramatically improves the accuracy of computati

9 l RNA polymerase argue that the mechanism of Physarum: editing is distinct from that of other co-tran

10 RNA editing is extremely accurate in Physarum; however, little is known about its mechanism.

11 strong evidence that insertional editing in Physarum is mechanistically distinct from editing in kin

12 The most frequent editing type in Physarum is the insertion of individual Cs.

13 bstrate for nucleotide insertion in isolated Physarum mitochondria.

14 RNAs in Physarum: mitochondria contain extra nucleotides that ar

15 The dissection of RNA editing mechanisms in PHYSARUM: mitochondria has been hindered by the absence

16 Maturation of Physarum mitochondrial RNA involves the highly specific

17 d sites of partial and extragenic editing in Physarum mitochondrial RNAs, as well as an additional 77

18 ost likely involves transient pausing by the Physarum: mitochondrial RNA polymerase.

19 a, insertion of non-encoded nucleotides into PHYSARUM: mitochondrial RNAs is closely linked to transc

20 he insertion of non-encoded nucleotides into PHYSARUM: mitochondrial RNAs.

21 d in vitro transcription assays based on the Physarum mtRNAP to identify a novel activity associated

22 tion, and argues that insertional editing in Physarum occurs with a 5' to 3' polarity.

23 Networks of protoplasmic tubes of organism Physarum polycehpalum are macro-scale structures which o

24 l as for the PAF-AH from the lower eukaryote Physarum polycephalum although pPAF-AH and PAF-AH(II) to

25 g two organisms from the Myxomycetes, namely Physarum polycephalum and Didymium iridis, allows us to

26 tRNAs encoded on the mitochondrial DNA of Physarum polycephalum and Didymium nigripes require inse

27 transcribed from the mitochondrial genome of Physarum polycephalum are edited by the insertion of non

28 transcribed from the mitochondrial genome of Physarum polycephalum are heavily edited.

29 We show that the brainless slime mold Physarum polycephalum constructs a form of spatial memor

30 rk controlling commitment and sporulation of Physarum polycephalum from experimental results using a

31 The slime mold Physarum polycephalum grows as a random network of tubes

32 tes across its network remains a puzzle, but Physarum polycephalum has emerged as a novel model used

33 case in point is the mitochondrial genome of Physarum polycephalum in which only about one-third of t

34 Insertional RNA editing in Physarum polycephalum is a complex process involving the

35 Slime mould Physarum polycephalum is a single cell visible by the un

36 Physarum Polycephalum is a single cell visible by unaide

37 e cytochrome b apoprotein in mitochondria of Physarum polycephalum is created by the insertion of 43

38 hnique in the naturally synchronous organism Physarum polycephalum to examine the fate of core histon

39 m the myxomycetes Stemonitis flavogenita and Physarum polycephalum using a modified anchor PCR approa

40 Plasmodial transglutaminase of Physarum polycephalum was purified by anion exchange and

41 wo slime molds (Dictyostelium discoideum and Physarum polycephalum), and the roundworm (Caenorhabditi

42 a mobile group I intron in the rRNA genes of Physarum polycephalum, also can home into yeast chromoso

43 the co-transcriptional nature of editing in Physarum polycephalum, and will certainly provide future

44 intron found in the ribo-somal RNA genes of Physarum polycephalum, encodes the I-PpoI homing endonuc

45 nes from the myxomycetes Didymium iridis and Physarum polycephalum, indicating evolutionary conservat

46 e, a homing endonuclease from the slime mold Physarum polycephalum, is a small enzyme (2 x 20 kDa) of

47 ron-encoded endonuclease from the slime mold Physarum polycephalum, is a small enzyme (2 x 20 kDa) th

48 In the myxomycete Physarum polycephalum, nucleotides that are not specifie

49 Nuclei in G2 phase of the slime mold Physarum polycephalum, when transplanted, by plasmodial

50 tp8 genes within the mitochondrial genome of Physarum polycephalum, which had gone undetected by exis

51 the global regulation of DNA replication in Physarum polycephalum.

52 ethod to the mitochondrion of the slime mold Physarum polycephalum.

53 nuclei and nuclear matrix from plasmodia of Physarum polycephalum.

54 endonuclease was I-PpoI from the slime mould Physarum polycephalum.

55 been observed in the mitochondrial genome of Physarum polycephalum.

56 by a group I intron found in the slime mold Physarum polycephalum.

57 ntage (23%) of noncytidine insertions of any Physarum RNA characterized to date.

58 ly support a co-transcriptional mechanism of Physarum: RNA editing in which non-encoded nucleotides a

59 the complete mitochondrial transcriptome of Physarum using Illumina deep sequencing of purified mito

60 of a mobile, self-splicing Group I intron in Physarum was exploited.