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1 asmonic acid (JA)-induced gene regulation in Populus.
2 ironmental selection and local adaptation in Populus.
3 tative resistance to Melampsora in leaves of Populus.
4 prior to the salicoid genome duplication in Populus.
5 h sink provisioning and drought tolerance in Populus.
6 al responses to shade in the woody perennial Populus.
7 ling were induced under enriched FR light in Populus.
8 o both sink demand and plant water status in Populus.
9 es were expressed in secondary stem xylem of Populus.
10 iRNA family sizes were generally expanded in Populus.
11 many miRNAs still remain to be discovered in Populus.
12 those miRNAs that have only been observed in Populus.
13 se miRNAs were also found in Arabidopsis and Populus.
14 rom new and publically available datasets in Populus.
15 on wood development in the model angiosperm, Populus.
16 435 individuals from a natural population of Populus.
17 nkage-linkage disequilibrium (LD) mapping in Populus.
18 bium maintenance and cell differentiation in Populus.
19 to identify ARK1 binding loci genome-wide in Populus.
21 ts) to address this topic in hybrid zones of Populus alba and P. tremula, two widespread, ecologicall
23 o water stress, transgenic Populus tremula x Populus alba plants characterized by the strong down-reg
24 following shoot removal in Populus tremula x Populus alba softwood cuttings in the absence of exogeno
25 abidopsis (Arabidopsis thaliana) and poplar (Populus alba x grandidentata), and a series of analytica
27 n were modified in poplar (Populus tremula x Populus alba) by specifically down-regulating CINNAMYL A
29 activation-tagged poplar (Populus tremula x Populus alba) mutant with enhanced woody growth and chan
30 wn-regulated poplar trees (Populus tremula x Populus alba) on the bacterial rhizosphere microbiome an
31 s as well as hybrid aspen (Populus tremula x Populus alba) overexpressing the MYB134 transcription fa
32 veloped transgenic poplar (Populus tremula x Populus alba) plants with greatly increased rates of met
33 n of CSE in hybrid poplar (Populus tremula x Populus alba) resulted in up to 25% reduced lignin depos
34 erized response of poplar (Populus tremula x Populus alba) roots to low nitrogen (LN), which involves
35 ence that, in gray poplar (Populus tremula x Populus alba), Suc enters the phloem through plasmodesma
39 members, we searched the genome sequences of Populus and Arabidopsis, and identified, respectively, 9
44 In contrast, we found a single ICS gene in Populus and six other sequenced plant genomes, pointing
45 s analysis between the woody perennial plant Populus and the herbaceous annual plants Arabidopsis and
46 oss of conifers and large increases of Acer, Populus, and Quercus in northern hardwoods, whereas to t
48 ied a riparian broadleaf angiosperm species, Populus angustifolia, growing on water with a constant d
49 son of the organization of miRNA families in Populus, Arabidopsis and rice showed that miRNA family s
50 phenotypic variation in freeze resistance of Populus balsamifera across latitude and the growing seas
52 nes for adaptive phenology in balsam poplar, Populus balsamifera, a widespread forest tree whose rang
53 of a single widely distributed tree species, Populus balsamifera, with variation represented in globa
56 de (programs and scripts) for processing the Populus ChIP-seq data are provided within a publically a
57 rt here the functional characterization of a Populus class III HD ZIP gene, popREVOLUTA (PRE), that d
58 cloning and functional characterization of a Populus class-I KNOX homeobox gene, ARBORKNOX2 (ARK2), w
60 r of miRNA families previously identified in Populus, compared with the number of families identified
64 also demonstrate neutral loss scanning on a Populus deltoides leaf and on a lignin sample, both sign
65 lion expressed sequence tag (EST) reads from Populus deltoides leaf transcriptome and reconstructed f
68 ter availability on seedlings of two native (Populus deltoides spp. monilifera, Salix exigua) and thr
75 rifera) to the north vs. eastern cottonwood (Populus deltoides) and sweet gum (Liquidambar styraciflu
76 emission in oak (Quercus robur) and poplar (Populus deltoides) leaves in order to understand the reg
78 s a plant-associated bacterium isolated from Populus deltoides, and its draft genome sequence is repo
79 ago truncatula, dicot, Leguminosae), poplar (Populus deltoides, dicot, Salicaceae), and switchgrass (
84 a mapping experiment using Euphrates poplar (Populus euphratica), a so-called hero tree able to grow
85 x1) and GA-insensitive (35S:rgl1) transgenic Populus exhibited increased lateral root proliferation a
87 , comparison of genetic maps across multiple Populus families reveals consistently distorted segregat
88 formed ecological niche models (gENMs) using Populus fremontii (Salicaceae), a widespread tree specie
89 common garden with two native tree species, Populus fremontii and P. angustifolia, and their natural
90 crossing a naturally occurring F(1) hybrid (Populus fremontii x P. angustifolia) to a pure P. angust
91 ented or underrepresented in Arabidopsis and Populus gene pairs, while only two GO classes were under
94 ribution to the continued improvement of the Populus genome assembly, while demonstrating the feasibi
95 hIP-seq data have been integrated within the Populus Genome Integrative Explorer (PopGenIE) where the
96 romosome XIX that suggest this region of the Populus genome is in the process of developing character
97 , coupled with the recent publication of the Populus genome sequence, these maps present a unique opp
98 cation in Populus, the slow evolution of the Populus genome, or to differences in the selection press
100 nd associated putative target genes for four Populus homeodomain transcription factors expressed duri
107 ICS evolved independently in Arabidopsis and Populus in accordance with their distinct defense strate
109 othesize that duplicate gene preservation in Populus is driven by a combination of subfunctionalizati
110 0), even though the total number of genes in Populus is equivalent to that in Oryza and 1.5 times tha
111 ts) of potential QTLs for growth traits in a Populus linkage population (1200 progeny) and a natural
112 These results compared favorably with other Populus linkage studies, and addition of SSR loci from t
115 urements of isoprene emission from leaves of Populus nigra and hybrid aspen (Populus tremula x P. tre
116 ated Populus deltoides with gamma-irradiated Populus nigra pollen to produce >500 F1 seedlings contai
119 e in trees constitutively emitting isoprene (Populus nigra) or monoterpenes (Quercus ilex), or that d
120 al activity of flavan-3-ols in black poplar (Populus nigra), which include both monomers, such as cat
121 o three real microarray datasets: one from a Populus nitrogen stress experiment with 3 biological rep
123 nation and suggest that sex determination in Populus occurs through a ZW system in which the female i
125 ribes the development of transgenic poplars (Populus) overexpressing a mammalian cytochrome P450, a f
126 ates functional diversity and overlap of the Populus PHYB1 and PHYB2 in regulating shade responses.
128 n initial attempt at deciphering the role of Populus PHYs by evaluating transcriptional reprogramming
129 e expression and subcellular localization of Populus PHYs was studied by quantitative real-time PCR (
132 on in the number of most conserved miRNAs in Populus relative to Arabidopsis, may be linked to the re
138 dimorphism using >1300 individuals from two Populus species and assessing 96 non-reproductive functi
139 interspecific hybrid family derived from two Populus species during the first 24 yr of ontogeny.
147 one of the most abundant proteins in poplar (Populus spp) xylem, but its biological role has remained
151 are highly susceptible to competition (e.g. Populus spp.) or to biotic disturbances (e.g. Abies bals
159 sed network connectivity in SA-overproducing Populus, suggesting a previously undescribed role in SA-
160 a (Carica papaya; 139) is similar to that in Populus, supporting the hypothesis that the F-box gene f
167 r degree of synteny with the closely related Populus than with the distantly related Arabidopsis.
168 e linked to the recent genome duplication in Populus, the slow evolution of the Populus genome, or to
169 s were compared among Arabidopsis, Oryza and Populus to identify differential gene (DG) sets that are
170 fore sought to investigate ICS regulation in Populus to learn the extent of ICS involvement in SA syn
171 ein-coding genes suggests that assignment of Populus to Malvidae, rather than Fabidae, is warranted.
172 ybrid population of the model hardwood plant Populus to uncover transcriptional networks in xylem, le
177 ter the estimated divergence of host species Populus tremula and Populus balsamifera/Populus trichoca
178 ascular cambium, and wood-forming tissues of Populus tremula The transcriptome comprised 28,294 expre
180 re of the mature leaves of the model species Populus tremula x alba across all seven hierarchical ord
182 om leaves of Populus nigra and hybrid aspen (Populus tremula x P. tremuloides) in response to changes
184 poplar response to water stress, transgenic Populus tremula x Populus alba plants characterized by t
185 eling during 48 h following shoot removal in Populus tremula x Populus alba softwood cuttings in the
186 ent and composition were modified in poplar (Populus tremula x Populus alba) by specifically down-reg
188 y characterized an activation-tagged poplar (Populus tremula x Populus alba) mutant with enhanced woo
189 ield-grown, CCR-down-regulated poplar trees (Populus tremula x Populus alba) on the bacterial rhizosp
190 of catechin and PAs as well as hybrid aspen (Populus tremula x Populus alba) overexpressing the MYB13
192 hat down-regulation of CSE in hybrid poplar (Populus tremula x Populus alba) resulted in up to 25% re
193 sly poorly characterized response of poplar (Populus tremula x Populus alba) roots to low nitrogen (L
194 experimental evidence that, in gray poplar (Populus tremula x Populus alba), Suc enters the phloem t
197 ith contrasting wood anatomy (Quercus robur, Populus tremula x Populus alba, and Pinus pinaster).
198 t evolved with Populus trichocarpa (Ptr) and Populus tremula x Populus tremuloides (Ptt) were studied
199 in the strong isoprene emitter hybrid aspen (Populus tremula x Populus tremuloides), and used rapid c
204 rification, and functional reconstitution of Populus tremula x tremuloides CesA8 (PttCesA8), implicat
205 ambial development, we engineered transgenic Populus tremula x tremuloides trees with an elevated cyt
206 PECTIN METHYLESTERASE1 (PtxtPME1) in aspen (Populus tremula x tremuloides) triggers the formation of
208 the most abundantly expressed SUT isoform in Populus tremulaxalba, PtaSUT4, is a tonoplast (Group IV)
209 ase in the thermotolerance of hybrid poplar (Populus tremulaxPopulus alba) through overexpression of
210 (FTIRI) was developed that entailed growing Populus tremulodes seedlings on a thin, nutrient-enriche
211 ulus trichocarpa (Ptr) and Populus tremula x Populus tremuloides (Ptt) were studied from their ecolog
214 -width chronologies from 40 trembling aspen (Populus tremuloides Michx.) sites along a latitudinal gr
215 ea increment series from 40 trembling aspen (Populus tremuloides Michx.) sites along a latitudinal gr
217 Arabidopsis (Arabidopsis thaliana) CAD5 and Populus tremuloides sinapyl alcohol dehydrogenase, respe
219 iyear widespread die-off of trembling aspen (Populus tremuloides) across much of western North Americ
222 ies of four target species: trembling aspen (Populus tremuloides) and paper birch (Betula papyrifera)
223 espread and climate-induced trembling aspen (Populus tremuloides) forest mortality in western North A
225 ponderosa) and angiosperm (trembling aspen - Populus tremuloides) tree species in the southwestern US
226 rene emitter hybrid aspen (Populus tremula x Populus tremuloides), and used rapid changes in ambient
234 edon species Medicago truncatula (Medicago), Populus trichocarpa (poplar) and Arabidopsis thaliana (A
236 small RNAs from abiotic stressed tissues of Populus trichocarpa (Ptc) and the identification of 68 p
239 We resequenced 16 genomes of the model tree Populus trichocarpa and genotyped 120 trees from 10 subp
240 eudo-backcross progeny of 154 individuals of Populus trichocarpa and P. deltoides analyzed with long-
244 liana), guar (Cyamopsis tetragonolobus), and Populus trichocarpa catalyze beta-1,4-mannan and glucoma
245 bundance and distribution of foliar fungi of Populus trichocarpa in wild populations across its nativ
246 Interestingly, phylogenetic analysis using Populus trichocarpa revealed evidence for small RNA-medi
248 procedure for isolation and transfection of Populus trichocarpa stem differentiating xylem protoplas
250 ection scans and association analyses of 544 Populus trichocarpa trees to reveal genomic bases of ada
251 representing 1,100 individual undomesticated Populus trichocarpa trees, 47 extreme phenotypes were se
253 ce (Oryza sativa), Arabidopsis thaliana, and Populus trichocarpa using the Plant Cis-acting Regulator
254 sence of quantitative trait loci (QTLs) in a Populus trichocarpa x P. deltoides F(2) population.
255 studies of approximately 400 natural poplar (Populus trichocarpa) accessions phenotyped for 60 ecolog
257 tuberosum), Medicago truncatula, and poplar (Populus trichocarpa) revealed conserved ratios of the AS
258 rect evidence demonstrating that the poplar (Populus trichocarpa) wood-associated NAC domain transcri
259 d from the genome of the model tree species (Populus trichocarpa), of which 11 are Populus specific.
260 on a screen of natural accessions of poplar (Populus trichocarpa), revealing that the leaf cuticular
261 er 40% had up-regulated orthologs in poplar (Populus trichocarpa), rice (Oryza sativa), or Chlamydomo
262 abidopsis (Arabidopsis thaliana) and poplar (Populus trichocarpa), two near-complete rosid genome seq
263 unction endoglucanase from black cottonwood (Populus trichocarpa), which reveals a small, newly recog
271 omosome, was applied to the chromosome 19 of Populus trichocarpa, an incipient sex chromosome, deciph
272 sphate synthase (DXS) enzyme was cloned from Populus trichocarpa, and the recombinant protein (PtDXS)
274 ) biosynthesis during stem wood formation in Populus trichocarpa, two enzymes, Ptr4CL3 and Ptr4CL5, c
275 two reference plant species, A. thaliana and Populus trichocarpa, with annotations based on UniProt,
288 boring chromosome regions of A. thaliana and Populus trichocarpa; whereas, no pairs are mapped to the
289 is thaliana, papaya [Carica papaya], poplar [Populus trichocarpa], and grape [Vitis vinifera]), we de
290 pressing a constitutively active form of the Populus type-B cytokinin response regulator PtRR13 (Delt
292 or goal for bioenergy crops, such as poplar (Populus), which will be grown on marginal lands with lit
293 lower than expected from previous studies in Populus, with r(2) dropping below 0.2 within 3-6 kb.
296 Knockdown lines of CYP79D6/7 in gray poplar (Populus x canescens) exhibited a decreased emission of a
299 es and physiological performance in poplars (Populus x canescens) with either wild-type or RNAi-suppr
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