ライフサイエンスコーパス: Pseudomonas putida

1 6S rRNA from whole human blood infected with Pseudomonas putida .

2 e), an enzyme cancer therapeutic cloned from Pseudomonas putida.

3 r in the first step of camphor catabolism by Pseudomonas putida.

4 n Escherichia coli was the donor compared to Pseudomonas putida.

5 heme monooxygenase cytochrome P450(cam) from Pseudomonas putida.

6 sa were compared with planktonic cultures of Pseudomonas putida.

7 ine alpha,gamma-lyase (MET) gene cloned from Pseudomonas putida.

8 are similar to those of the same enzyme from Pseudomonas putida.

9 olite repression control has been studied in Pseudomonas putida.

10 to acid dehydrogenase multienzyme complex of Pseudomonas putida.

11 rom strain mt-2 of the purple soil bacterium Pseudomonas putida.

12 e biosynthesis in Pseudomonas aeruginosa and Pseudomonas putida.

13 t putidaredoxin/putidaredoxin reductase from Pseudomonas putida.

14 r to the 12-kDa FD of gamma-purple bacterium Pseudomonas putida.

15 nal activator of the inducible bkd operon of Pseudomonas putida.

16 cloned and expressed in Escherichia coli and Pseudomonas putida.

17 s bacterial members, primarily P-450cam from Pseudomonas putida.

18 nzyme have been obtained from rat kidney and Pseudomonas putida.

19 ly describe the dynamics of Cd(II) uptake by Pseudomonas putida.

20 the organism was initially misidentified as Pseudomonas putida.

21 swimming trajectories of the soil bacterium Pseudomonas putida.

22 ive analysis of the three CheR paralogues of Pseudomonas putida.

23 advantage in growth competition assays with Pseudomonas putida.

24 BPA) in the naphthalene catabolic pathway of Pseudomonas putida.

25 -component camphor-hydroxylating system from Pseudomonas putida.

26 xy-4-oxoquinoline 2,4-dioxygenase (QDO) from Pseudomonas putida 33/1 are homologous cofactor-independ

27 Pseudomonas putida, a bacterium that colonizes plant roo

28 The muconate lactonizing enzyme (MLE) from Pseudomonas putida, a member of a family that catalyzes

29 (S)-Mandelate dehydrogenase (MDH) from Pseudomonas putida, a member of the flavin mononucleotid

30 (S)-Mandelate dehydrogenase from Pseudomonas putida, a member of the flavin mononucleotid

31 hly conserved in diverse bacteria, including Pseudomonas putida, Acinetobacter calcoaceticus, Agrobac

32 In the presence of copper, Pseudomonas putida activates transcription of cinAQ via

33 in Escherichia coli, Pseudomonas aeruginosa, Pseudomonas putida, Agrobacterium tumefaciens, and Acine

34 (S)-Mandelate dehydrogenase from Pseudomonas putida, an FMN-dependent alpha-hydroxy acid

35 educed from crystal structures of PcaHG from Pseudomonas putida and Acinetobacter sp. as well as of r

36 egion encoding this protein can replicate in Pseudomonas putida and E. coli.

37 tudy, we cloned the L-methioninase gene from Pseudomonas putida and isolated pure and abundant recomb

38 avoenzyme mandelate dehydrogenase (MDH) from Pseudomonas putida and of the substrate-reduced enzyme h

39 tprinting) over the course of growth of both Pseudomonas putida and P. aeruginosa, and compared the w

40 eracts with the DnaB replicative helicase of Pseudomonas putida and Pseudomonas aeruginosa and initia

41 milar to head morphogenesis genes encoded by Pseudomonas putida and Pseudomonas aeruginosa bacterioph

42 encoding the replicative helicase, DnaB, of Pseudomonas putida and Pseudomonas aeruginosa were isola

43 similarity with two sequenced pseudomonads, Pseudomonas putida and Pseudomonas aeruginosa, yet revea

44 teins of similar size in crude extracts from Pseudomonas putida and Pseudomonas fluorescens, suggesti

45 l beneficial interaction between a strain of Pseudomonas putida and the fungus Saccharomyces cerevisi

46 ylhomocysteine hydrolase (rSAHH) cloned from Pseudomonas putida and Trichomonas vaginalis, respective

47 hromosome, including Pseudomonas aeruginosa, Pseudomonas putida and Yersinia pestis, and in the prese

48 Biofilms with protein-based (Pseudomonas putida) and polysaccharide based EPS (Pseudo

49 n soil bacteria, Pseudomonas fluorescens and Pseudomonas putida, and a mercury resistance (Hg(R)) pla

50 degradation such as Comamonas testosteroni, Pseudomonas putida, and Ochrobactrum anthropi were selec

51 hat the DnaA proteins from Escherichia coli, Pseudomonas putida, and Pseudomonas aeruginosa bind to t

52 pproaches were employed for EPS removal from Pseudomonas putida, and the measured sulfhydryl concentr

53 CjrB was homologous to the TonB protein from Pseudomonas putida; and CjrC was homologous to a putativ

54 es of the mandelate metabolic pathway permit Pseudomonas putida ATCC 12633 to utilize either or both

55 When Pseudomonas putida ATCC 39167 and plant-deleterious Pseu

56 Pseudomonas sp. 1A, Arthrobacter sp. JS443, Pseudomonas putida B2) in the pH range 6.1-8.6 with rest

57 and 4-chlorocatechol) was developed based on Pseudomonas putida bacteria harboring the plasmid pSMM50

58 a, Escherichia coli, Salmonella enterica and Pseudomonas putida, based on single nucleotide differenc

59 (S)-Mandelate dehydrogenase from Pseudomonas putida belongs to a FMN-dependent enzyme fam

60 (S)-Mandelate dehydrogenase from Pseudomonas putida belongs to a FMN-dependent enzyme fam

61 In Pseudomonas putida, benzoate and 3-chlorobenzoate are co

62 In Pseudomonas putida biofilms, nutrient starvation trigger

63 Here, exoproteomic analysis of Pseudomonas putida BIRD-1 (BIRD-1), Pseudomonas fluoresc

64 Pseudomonas putida bloodstream infections were reported

65 The rhizobacterium Pseudomonas putida BTP1 stimulates induced systemic resi

66 was sufficient for autonomous replication in Pseudomonas putida but not in Escherichia coli.

67 ulation of roots with a biocontrol strain of Pseudomonas putida, but not with a siderophore-deficient

68 of the plant-associated terrestrial microbe Pseudomonas putida by Manuel Espinosa-Urgel's group that

69 Delta(5)-3-ketosteroid isomerase from Pseudomonas putida catalyzes a C-H bond cleavage and for

70 Glucarate dehydratase (GlucD) from Pseudomonas putida catalyzes the dehydration of both (D)

71 The caffeine degradation pathway of Pseudomonas putida CBB5 utilizes an unprecedented glutat

72 Pseudomonas putida CBB5 was isolated from soil by enrich

73 Pseudomonas putida CBB5, which grows on several purine a

74 ned the crystal structure of the prokaryotic Pseudomonas putida CMLE (PpCMLE) at 2.6 A resolution.

75 The P450cam monooxygenase from Pseudomonas putida consists of three redox proteins: NAD

76 hrome p-cresol methylhydroxylase (PCMH) from Pseudomonas putida contains FAD covalently attached to T

77 Pseudomonas putida converts benzoate to catechol using t

78 the E. coli, Mycobacterium tuberculosis and Pseudomonas putida CRPs are considered in the context of

79 porters in Pseudomonas aeruginosa and six in Pseudomonas putida, different transporters were predicte

80 Here, we performed a transposon screen of Pseudomonas putida DSM 3601 to identify genes necessary

81 reading frames, three of them homologous to Pseudomonas putida, E. coli, and Haemophilus influenzae

82 The catBCA operon of Pseudomonas putida encodes enzymes involved in the catab

83 . coli K-12) in mixtures with soil bacteria (Pseudomonas putida F1 and Bacillus subtilis 168).

84 C 33694, Pantoea agglomerans ATCC 33243, and Pseudomonas putida F1 are collected and form a reference

85 Toluene dioxygenase from Pseudomonas putida F1 has been studied extensively with

86 genase component of toluene dioxygenase from Pseudomonas putida F1 is an iron-sulfur protein (ISP(TOL

87 Exposure of Pseudomonas putida F1 to 0.1, 1.0, and 5.0 g/L of nZVI c

88 Pseudomonas putida F1 utilizes p-cumate (p-isopropylbenz

89 Pseudomonas putida F1 utilizes p-cymene (p-isopropyltolu

90 e toluene cis-dihydrodiol dehydrogenase from Pseudomonas putida F1 was used to produce enantiomerical

91 l structure of Pput2725 from the biodegrader Pseudomonas putida F1, a COG4313 channel of unknown func

92 abolic pathway serve as chemoattractants for Pseudomonas putida F1.

93 ods on the aerobic degradation of toluene by Pseudomonas putida F1.

94 ay crystal structure of an OprB channel from Pseudomonas putida F1.

95 hysiological changes of the plant saprophyte Pseudomonas putida following 6 h of attachment to a sili

96 Naphthalene-degrading Pseudomonas putida G7 cells were exposed to glucose, sal

97 Pseudomonas putida G7 exhibits chemotaxis to naphthalene

98 achment, and transport of the soil bacterium Pseudomonas putida G7 in saturated porous media.

99 G7, which is chemotactic to naphthalene, and Pseudomonas putida G7 Y1, a nonchemotactic mutant strain

100 ding bacteria Mycobacterium gilvum VM552 and Pseudomonas putida G7, acting as representative nonflage

101 A 10 mL pulse of Pseudomonas putida G7, which is chemotactic to naphthale

102 r similar to that of NahR-regulated genes in Pseudomonas putida G7.

103 ator of the naphthalene degradation genes in Pseudomonas putida G7.

104 to Escherichia coli and to a PhaC- mutant of Pseudomonas putida gave a Pha+ phenotype in both strains

105 es produced by the biofilm-forming bacterium Pseudomonas putida GB-1 and the white-rot fungus Coprine

106 I) (Mn(II)), mediated by the obligate aerobe Pseudomonas putida GB-1, was tested in a column of quart

107 structure of (D)-glucarate dehydratase from Pseudomonas putida (GlucD) has been solved at 2.3 A reso

108 the structure of a domain-swapped dimer but Pseudomonas putida glyoxalase I has been reported to be

109 nes to the active sites of human, yeast, and Pseudomonas putida glyoxalase I, as the log K(i) values

110 able in Stenotrophomonas maltophilia P21 and Pseudomonas putida H2.

111 (S)-mandelate dehydrogenase (MDH-GOX2) from Pseudomonas putida has been determined at 2.15 A resolut

112 combinant methioninase (rMETase) cloned from Pseudomonas putida has been found previously to be an ef

113 tochrome P450cam (CYP101) from the bacterium Pseudomonas putida has been investigated by high-resolut

114 T medium on catabolite repression control in Pseudomonas putida has been investigated using the bkd o

115 Pseudomonas putida has two chromosomally encoded arsH ge

116 of the cytochrome P450cam monooxygenase from Pseudomonas putida, has been determined to 1.90 A resolu

117 the third enzyme in the mandelate pathway of Pseudomonas putida, has been solved by multiple isomorph

118 ), from the camphor hydroxylation pathway of Pseudomonas putida have been investigated as a function

119 In contrast, Shewanella oneidensis and Pseudomonas putida have high iron but low intracellular

120 cytochrome P450cam monooxygenase system from Pseudomonas putida, have been studied.

121 identifications were Pseudomonas fluorescens-Pseudomonas putida (i.e., the strain was either P. fluor

122 Unsaturated biofilms of Pseudomonas putida, i.e., biofilms grown in humid air, w

123 ases, designated xenobiotic reductases, from Pseudomonas putida II-B and P. fluorescens I-C that remo

124 from NG-contaminated soil and identified as Pseudomonas putida II-B and P. fluorescens I-C.

125 , voltage (LOV) photoreceptor PpSB1-LOV from Pseudomonas putida in both the dark and light states.

126 ity, we solved crystal structures of MurU of Pseudomonas putida in native and ligand-bound states at

127 (S)-Mandelate dehydrogenase (MDH) from Pseudomonas putida is a flavin mononucleotide (FMN)-depe

128 (S)-Mandelate dehydrogenase from Pseudomonas putida is a member of a FMN-dependent enzyme

129 Benzaldehyde lyase (BAL) from Pseudomonas putida is a thiamin diphosphate (ThDP)-depen

130 Degradation of protocatechuate in Pseudomonas putida is accomplished by the products of th

131 (S)-Mandelate dehydrogenase from Pseudomonas putida is an FMN-dependent alpha-hydroxy aci

132 The soil bacterium Pseudomonas putida is capable of degrading many aromatic

133 hrome p-cresol methylhydroxylase (PCMH) from Pseudomonas putida is composed of a flavoprotein homodim

134 otocatechuate 3,4-dioxygenase (3,4-PCD) from Pseudomonas putida is ligated axially by Tyr447 and His4

135 e aromatic acid 4-hydroxybenzoate (4-HBA) by Pseudomonas putida is mediated by PcaK, a membrane-bound

136 ChrR of Pseudomonas putida is one such enzyme that has also been

137 P450cam from Pseudomonas putida is the best characterized member of t

138 Cytochrome P450cam (CYP101) from Pseudomonas putida is unusual among P450 enzymes in that

139 component of the beta-ketoadipate pathway of Pseudomonas putida, is a member of a family of related e

140 ing the only GGDEF/EAL response regulator in Pseudomonas putida, is transcriptionally regulated by Rp

141 this report we demonstrate that a strain of Pseudomonas putida KT2440 endowed with chromosomal expre

142 er II McpS chemotaxis receptor (McpS-LBR) of Pseudomonas putida KT2440 in complex with different chem

143 The soil bacterium Pseudomonas putida KT2440 lacks a functional Embden-Meye

144 In the presence of copper, Pseudomonas putida KT2440 produces the CinA and CinQ pro

145 odel soil- and rhizosphere-dwelling organism Pseudomonas putida KT2440 to elaborate on the genomics a

146 y unidentified ability of the soil bacterium Pseudomonas putida KT2440 to synthesize nanoparticles of

147 mplete genome sequence of the soil bacterium Pseudomonas putida KT2440 was published in 2002 (Nelson

148 When non plasmid-harboring cells of Pseudomonas putida KT2440 were spiked with different dil

149 of BXs on the interaction between maize and Pseudomonas putida KT2440, a competitive coloniser of th

150 eudomonas syringae pv. tomato strain DC3000, Pseudomonas putida KT2440, and Agrobacterium tumefaciens

151 ures of various bacterial species, including Pseudomonas putida KT2440, Enterococcus faecalis ATCC 29

152 nd PP_3287) from a single bacterial species, Pseudomonas putida KT2440, have been analyzed.

153 dhesion behaviors of five bacterial species, Pseudomonas putida KT2440, Salmonella Typhimurium ATCC 1

154 se a natural aromatic-catabolizing organism, Pseudomonas putida KT2440, to demonstrate that these aro

155 en-gene operon that enables LA catabolism in Pseudomonas putida KT2440.

156 us irregularis and the rhizobacterial strain Pseudomonas putida KT2440.

157 ng LysR-type transcriptional regulators from Pseudomonas putida KT2440.

158 eudomonas strains, including E. coli K12 and Pseudomonas putida KT2440.

159 lysis of a promiscuous alanine racemase from Pseudomonas putida (KT2440) was coupled with that of PAM

160 n structures of mandelate racemase (MR) from Pseudomonas putida, Lys 166 and His 297 are positioned a

161 iscovered enzyme in the mandelate pathway of Pseudomonas putida, mandelamide hydrolase (MAH), catalyz

162 sferases yeast flavocytochrome b2 (FCB2) and Pseudomonas putida mandelate dehydrogenase (MDH).

163 ase (yjhG), a 2-keto acid decarboxylase from Pseudomonas putida (mdlC) and native E. coli aldehyde re

164 i harboring the pGFP plasmid and a strain of Pseudomonas putida modified with a Tn5 derivative, Tn5GF

165 benzoate 1,2-dioxygenase system (BZDOS) from Pseudomonas putida mt-2 catalyzes the NADH-dependent oxi

166 4-OD) and vinylpyruvate hydratase (VPH) from Pseudomonas putida mt-2 form a complex that converts 2-o

167 4-OT, from Pseudomonas putida mt-2, catalyzes the conversion of 2-o

168 4-OT, a homohexamer from Pseudomonas putida mt-2, is the most extensively studied

169 luene-xylene TOL catabolic plasmid pWW0 from Pseudomonas putida mt-2.

170 homology with hypothetical polypeptides from Pseudomonas putida, Mycobacterium tuberculosis, Ricketts

171 on of naphthalene and 2-methylnaphthalene by Pseudomonas putida NCIB 9816 and Pseudomonas fluorescens

172 identity with the corresponding subunits in Pseudomonas putida NCIB 9816-4, for which the tertiary s

173 gn we offer a nicotine-degrading enzyme from Pseudomonas putida, NicA2, a flavin-containing protein.

174 Nitrile hydratase from Pseudomonas putida NRRL-18668 has been purified and char

175 d load the DnaB helicase of P. aeruginosa or Pseudomonas putida onto the RK2 origin in vitro and did

176 oacetate and 2-phosphonopropionate by either Pseudomonas putida or Escherichia coli cells.

177 to detect the known TonB homologs of either Pseudomonas putida or Haemophilus influenzae but did ide

178 Two different binding sites for Pseudomonas putida PcaR differ from the consensus in onl

179 two different willow clones and a grass with Pseudomonas putida PD1 was found to promote root and sho

180 tKSI) and approximately 10(3) M for KSI from Pseudomonas putida (pKSI).

181 The root-colonizing pseudomonad Pseudomonas putida (Pp) appears to produce two subunits,

182 Genes from Pseudomonas putida (Pp), sodA, encoding manganese-supero

183 he major CatA from a root-colonizing isolate Pseudomonas putida (Pp), was cloned by complementation i

184 Benzoylformate decarboxylase from Pseudomonas putida (PpBFDC) is a thiamin diphosphate-dep

185 shells of the Co-type nitrile hydratase from Pseudomonas putida (ppNHase) that may be important for c

186 rystal structure of the anaerobic complex of Pseudomonas putida protocatechuate 3,4-dioxygenase (3,4-

187 P450cam-dependent monooxygenase system from Pseudomonas putida, putidaredoxin (Pdx) shuttles electro

188 an ABC transporter homologous to proteins in Pseudomonas putida responsible for the extrusion of orga

189 nscriptional start site of the bkd operon of Pseudomonas putida revealed that the transcriptional sta

190 ity) to the sigma(54) protein encoded by the Pseudomonas putida rpoN gene.

191 Previously, an efficient D-xylose utilizing Pseudomonas putida S12 strain was obtained by introducin

192 rene catabolic and detoxification pathway of Pseudomonas putida S12.

193 to Escherichia coli: Pseudomonas aeruginosa, Pseudomonas putida, Salmonella enterica serovar Typhimur

194 genetically distant hosts: Escherichia coli, Pseudomonas putida, Sphingobium japonicum, and Cupriavid

195 The environmental isolate Pseudomonas putida SQ1 is also able to use SQ for growth

196 uctase (MerA) extracted from an Hg-resistant Pseudomonas putida strain FB1.

197 g the extent to which alginate production by Pseudomonas putida strain mt-2 and by other fluorescent

198 Pseudomonas putida strain mt-2 unsaturated biofilm forma

199 Pseudomonas putida strain PP3 produces two hydrolytic de

200 tative capillary assay and demonstrated that Pseudomonas putida strains F1 and PRS2000 were attracted

201 lobacter crescentus, Pseudomonas aeruginosa, Pseudomonas putida, Streptomyces coelicolor, and chromos

202 Putidaredoxin of the CYP101A1 system from Pseudomonas putida supports substrate oxidation by CYP19

203 ensis TCA20, Pseudomonas palleroniana TCA16, Pseudomonas putida TCA23 and N7, and Pseudomonas stutzer

204 e use of mini-Tn5-'phoA to identify genes in Pseudomonas putida that are matric water stress controll

205 nabaena PCC 7120, Pseudomonas aeruginosa and Pseudomonas putida that bind multiple zinc ions with hig

206 rocatechol are central catabolic pathways of Pseudomonas putida that convert aromatic and chloroaroma

207 rocatechol are central catabolic pathways of Pseudomonas putida that convert aromatic and chloroaroma

208 a transporter and chemoreceptor protein from Pseudomonas putida that is encoded as part of the beta-k

209 ansmembrane portion of PcaK, a permease from Pseudomonas putida that transports 4-hydroxybenzoate (4-

210 In the camphor monooxygenase system from Pseudomonas putida, the [2Fe-2S]-containing putidaredoxi

211 Although cytochrome P450cam from Pseudomonas putida, the archetype for all heme monooxyge

212 In Pseudomonas putida, the plasmid-borne clcABD operon enco

213 port the directed evolution of the P450 from Pseudomonas putida to create mutants that hydroxylate na

214 uct was designed to allow the soil bacterium Pseudomonas putida to survive only in the presence of ar

215 expressed in the nonocular pathogenic host, Pseudomonas putida, to elucidate the molecular propertie

216 l structures of two outer membrane proteins, Pseudomonas putida TodX and Ralstonia pickettii TbuX, wh

217 , a vertebrate-type [2Fe-2S] ferredoxin from Pseudomonas putida, transfers electrons from NADH-putida

218 successfully transfer plasmid pBBR1MCS2 into Pseudomonas putida UWC1, Escherichia coli DH5alpha and P

219 The swimming behavior of Pseudomonas putida was analyzed with a tracking microsco

220 mplexes of tartrate dehydrogenase (TDH) from Pseudomonas putida was carried out.

221 elope in the solvent tolerance mechanisms of Pseudomonas putida was investigated.

222 reductase (Pdr) and putidaredoxin (Pdx) from Pseudomonas putida was studied by molecular modeling, mu

223 In this study, a genome-scale model of Pseudomonas putida was used to study the key issue of un

224 the electron donor to cytochrome P450cam in Pseudomonas putida, was improved by mutating non-ligatin

225 Using chemostat with cell retention (CCR) of Pseudomonas putida, we resolve this controversy and show

226 for the swimming behavior of soil bacterium Pseudomonas putida were based on literature values.

227 ite of Delta(5)-3-ketosteroid isomerase from Pseudomonas putida were found to exhibit substantial var

228 for Acinetobacter may also be applicable to Pseudomonas putida, where the PcaK permease has an addit

229 The flhF gene of Pseudomonas putida, which encodes a GTP-binding protein,

230 ranscription of TtgABC, a key efflux pump in Pseudomonas putida, which is highly resistant to antibio

231 oxygenase CYP101 (cytochrome P450(cam)) from Pseudomonas putida with the aim of generating novel syst