ライフサイエンスコーパス: Pyrococcus

1 erium tuberculosis and from three species of Pyrococcus.

2 NAD+ ligases in two Thermococcus species and Pyrococcus abyssi and an ATP/ADP ligase in Aeropyrum per

3 S elements were identified in the genomes of Pyrococcus abyssi and Pyrococcus horikoshii.

4 neutral sodium/proton antiporter PaNhaP from Pyrococcus abyssi at 3.2 A, and have determined its stru

5 errupts the DNA polymerase II DP2 subunit in Pyrococcus abyssi can be overexpressed and purified as a

6 errupts the DNA polymerase II DP2 subunit in Pyrococcus abyssi can be overexpressed in Escherichia co

7 from the deep sea hyperthermophilic archaeon Pyrococcus abyssi demonstrate the existence of carbamoyl

8 structure of the archaeal MCM helicase from Pyrococcus abyssi in its single octameric ring assembly.

9 Pyrococcus abyssi NucS is the founding member of a new f

10 precursor composed of the hyperthermophilic Pyrococcus abyssi PolII intein and extein.

11 tion NMR structures of the hyperthermophilic Pyrococcus abyssi PolII intein, which has a noncanonical

12 structures of the zymogens of two of these (Pyrococcus abyssi proabylysin and Methanocaldococcus jan

13 udy of the PaNhaP Na(+)/H(+) antiporter from Pyrococcus abyssi reconstituted into liposomes.

14 transfer RNA synthetase from the thermophile Pyrococcus abyssi that forms complementary van der Waals

15 fide origin of replication was reported was Pyrococcus abyssi, where a single origin was identified.

16 rupting the DNA polymerase II DP2 subunit in Pyrococcus abyssi, which has a C-terminal glutamine, is

17 Fractionation experiments in Pyrococcus and Halobacterium cells revealed that, in viv

18 of two organisms corresponding to the genus Pyrococcus and three groups corresponding to the genus T

19 oncluded that the structural alternations in Pyrococcus Fd relative to other hyperthermostable Fds ar

20 rates of proofreading-proficient T7, T4, and Pyrococcus furiosis DNA polymerases are compared to thei

21 n with protein disulfide oxidoreductase from Pyrococcus furiosis, we describe a new class of protein

22 of RPP21 from the hyperthermophilic archaeon Pyrococcus furiosus ( Pfu) using conventional and parama

23 ophilum (optimal growth at 55 degrees C) and Pyrococcus furiosus (100 degrees C) are homo-dimeric enz

24 s) that have been annotated in the genome of Pyrococcus furiosus (optimal growth temperature, 100 deg

25 ng enzyme have been previously purified from Pyrococcus furiosus (optimum growth temperature, 100 deg

26 cluster in the D14C variant ferredoxin from Pyrococcus furiosus (Pf D14C Fd).

27 of the rubredoxins from the hyperthermophile Pyrococcus furiosus (Pf) and the mesophile Clostridium p

28 s of Rds from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) and the mesophilic bacterium Cl

29 se (POR) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) catalyzes the final oxidative s

30 xin (Fd) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) have been characterized by (1)H

31 xin (Fd) from the hyperthermophilic archaeon Pyrococcus furiosus (Pf) possesses several unique proper

32 distance to the [Fe(SCys)(4)] center in the Pyrococcus furiosus (Pf) Rd crystal structure compared t

33 Amide exchange rates were measured for Pyrococcus furiosus (Pf) rubredoxin substituted with eit

34 ine monophosphate dehydrogenase (IMPDH) from Pyrococcus furiosus (Pf), a hyperthermophillic archeon.

35 ter of the hyperthermophilic marine archaea, Pyrococcus furiosus (Pf), we have determined the locatio

36 in reduced and oxidized rubredoxin (Rd) from Pyrococcus furiosus (Pf).

37 The Argonaute of the archaeon Pyrococcus furiosus (PfAgo) belongs to a different branc

38 ferritin from the hyperthemophilic bacterium Pyrococcus furiosus (PfFt), have been used as models for

39 nding studies with a mutant of ferritin from Pyrococcus furiosus (PfFtn) in which self-assembly was a

40 cMetAP-I) and the hyperthermophilic archaeon Pyrococcus furiosus (PfMetAP-II) was investigated.

41 coli (EcMetAP-I) and the type II MetAP from Pyrococcus furiosus (PfMetAP-II).

42 eptidase from the hyperthermophilic archaeon Pyrococcus furiosus (PfMetAP-II; EC 3.4.11.18) has been

43 structures of apo- and holorubredoxins from Pyrococcus furiosus (PfRd) and Clostridium pasteurianum

44 rks in rubredoxins from the hyperthermophile Pyrococcus furiosus (PfRd), and its mesophilic analogue

45 luble [NiFe]-hydrogenase: hydrogenase I from Pyrococcus furiosus (PfSHI), which grows optimally near

46 the beta-subunit of tryptophan synthase from Pyrococcus furiosus (PfTrpB).

47 he thermostable family B DNA polymerase from Pyrococcus furiosus (Pfu Pol) contains sensitive determi

48 on the POP of the hyperthermophilic archaeon Pyrococcus furiosus (Pfu) 85 degrees C in both H(2)O and

49 P holoenzyme from the thermophilic archaeon Pyrococcus furiosus (Pfu) and furthered our understandin

50 f-replication (CSR), we evolved a version of Pyrococcus furiosus (Pfu) DNA polymerase that tolerates

51 Pyrococcus furiosus (Pfu) harbors three CRISPR-Cas immun

52 ng strategy to pinpoint the binding sites of Pyrococcus furiosus (Pfu) L7Ae on its cognate RNase P RN

53 ronounced unwinding of primer-templates with Pyrococcus furiosus (Pfu) polymerase-DNA complexes conta

54 We investigated Pyrococcus furiosus (Pfu) RNase P, an archaeal RNP that

55 urthermore, an N-terminal deletion mutant of Pyrococcus furiosus (Pfu) RPP29 that is defective in ass

56 plification utilized the DNA polymerase from Pyrococcus furiosus (Pfu) which, unlike Taq, does not in

57 ered a thermostable enzyme from the archaeon Pyrococcus furiosus (Pfu), which increases yields of PCR

58 mutants of the family B DNA polymerase from Pyrococcus furiosus (Pfu-Pol), with superb performance i

59 A maltodextrin-binding protein from Pyrococcus furiosus (PfuMBP) has been overproduced in Es

60 maltose binding protein from the thermophile Pyrococcus furiosus (PfuMBP).

61 ics of rubredoxins from the hyperthermophile Pyrococcus furiosus (RdPf) and the mesophile Clostridium

62 he small iron-sulfur protein rubredoxin from Pyrococcus furiosus (RdPf) at pH 2.

63 (Topt = 37 degrees C) and hyperthermophilic Pyrococcus furiosus (Topt = 95 degrees C) were recorded

64 e we show that purified Mre11 and Rad50 from Pyrococcus furiosus act cooperatively with HerA and NurA

65 50 homologues from the thermophilic archaeon Pyrococcus furiosus and demonstrate that the two protein

66 and human clamp loaders, and the two protein Pyrococcus furiosus and Methanobacterium thermoautotroph

67 Divergence of the hyperthermophilic Archaea, Pyrococcus furiosus and Pyrococcus horikoshii, was asses

68 Pyrococcus furiosus and Pyrococcus woesei grow optimally

69 mate dehydrogenase from the hyperthermophile Pyrococcus furiosus and the comparison of this structure

70 bredoxin from the hyperthermophilic archaeon Pyrococcus furiosus and the mesophilic bacterium Clostri

71 te dehydrogenases from the hyperthermophiles Pyrococcus furiosus and Thermococcus litoralis whose opt

72 In the Euryarchaeota species Pyrococcus furiosus and Thermococcus litoralis, phosphog

73 egion between two hyperthermophilic Archaea, Pyrococcus furiosus and Thermococcus litoralis.

74 have applied directed evolution to TrpB from Pyrococcus furiosus and Thermotoga maritima to generate

75 cale applications on Caenorhabditis elegans, Pyrococcus furiosus and three cyanobacterial genomes are

76 se and two proteins of unknown function from Pyrococcus furiosus and Vibrio parahaemolyticus.

77 cryoEM), we have solved the structure of the Pyrococcus furiosus archaellum filament at 4.2 A resolut

78 Pyrococcus horikoshii (PH1704) and PfpI from Pyrococcus furiosus are members of a class of intracellu

79 stal structure of the Argonaute protein from Pyrococcus furiosus at 2.25 angstrom resolution.

80 protein-translocating channel SecYEbeta from Pyrococcus furiosus at 3.1-A resolution suggests a mecha

81 ulfolobus solfataricus N-terminal domain and Pyrococcus furiosus ATPase domain.

82 protein from the hyperthermophilic archaeon Pyrococcus furiosus belongs to the Lrp/AsnC family of tr

83 l activator, PF1088, which was identified in Pyrococcus furiosus by a bioinformatic approach.

84 systems, Cmr eliminates plasmid invaders in Pyrococcus furiosus by a mechanism that depends on trans

85 l extracts of the hyperthermophilic archaeon Pyrococcus furiosus by its ability to hydrolyze N-acetyl

86 the proteolytic, hyperthermophilic archaeon Pyrococcus furiosus by multistep chromatography.

87 dase A, but instead resembles neurolysin and Pyrococcus furiosus carboxypeptidase--zinc metallopeptid

88 Here we identified Pyrococcus furiosus Cas6 as a novel endoribonuclease tha

89 CESI-top-down MS analysis of Pyrococcus furiosus cell lysate identified 134 proteins

90 Using reconstituted Pyrococcus furiosus Cmr complexes, we found that each of

91 from cells of the hyperthermophilic archaeon Pyrococcus furiosus contain high hydrogenase activity (9

92 the proteolytic, hyperthermophilic archaeon Pyrococcus furiosus contain high specific activity (11 U

93 annotation of the hyperthermophilic archaeon Pyrococcus furiosus contained 2,065 open reading frames

94 The fermentative hyperthermophile Pyrococcus furiosus contains an NADPH-utilizing, heterot

95 ve shown that the hyperthermophilic archaeon Pyrococcus furiosus contains four distinct cytoplasmic 2

96 The thermostable DNA polymerase derived from Pyrococcus furiosus designated Pfu has the highest fidel

97 The metal-ion-dependent enzyme from Pyrococcus furiosus DSM 3638 showed a relatively high de

98 icus P2), and an anaerobic hyperthermophile (Pyrococcus furiosus DSM 3638).

99 The genome of the hyperthermophile archaeon Pyrococcus furiosus encodes two transcription factor B (

100 information has been available only for the Pyrococcus furiosus enzyme (PfMre11), the conserved and

101 se extensions of stabilizing interactions in Pyrococcus furiosus Fd, however, lead to strong destabil

102 The crystal structure of Pyrococcus furiosus FEN-1, active-site metal ions, and m

103 Pyrococcus furiosus ferredoxin (Fd) contains a single [F

104 ication of species formed in the reaction of Pyrococcus furiosus ferredoxin D14C with nitric oxide.

105 the nature of the residue at position 14 in Pyrococcus furiosus ferredoxin is an important determina

106 e conformationally dynamically heterogeneous Pyrococcus furiosus ferredoxin with an intact disulfide

107 The hyperthermophilic archaeon Pyrococcus furiosus genome encodes three proteasome comp

108 in the AT-rich Methanococcus jannaschii and Pyrococcus furiosus genomes efficiently detects both kno

109 The anaerobic archaeon Pyrococcus furiosus grows by fermenting carbohydrates pr

110 The hyperthermophilic archaeon Pyrococcus furiosus grows optimally at 100 degrees C by

111 The archaeon Pyrococcus furiosus grows optimally at 100 degrees C by

112 The model archaeon Pyrococcus furiosus grows optimally near 100 degrees C o

113 Pyrococcus furiosus grows optimally near 100 degrees C u

114 ave recently shown that the hyperthermophile Pyrococcus furiosus has an extraordinarily high capacity

115 s of SOR from the hyperthermophilic archaeon Pyrococcus furiosus have been determined in the oxidized

116 of the archaeal family-B DNA polymerase from Pyrococcus furiosus have been investigated, illuminating

117 r-2 gene from the hyperthermophilic archaeon Pyrococcus furiosus having homology to bacterial and euk

118 e with the concomitant oxidation of NADPH by Pyrococcus furiosus hydrogenase.

119 The crystal structure of GalK from Pyrococcus furiosus in complex with MgADP and galactose

120 structure-specific 5' flap endonuclease from Pyrococcus furiosus in its complex with DNA.

121 determined the crystal structure of PGI from Pyrococcus furiosus in native form and in complex with t

122 Pyrococcus furiosus is a hyperthermophilic archaeon that

123 Pyrococcus furiosus is a hyperthermophilic archaeon whic

124 rredoxin from the hyperthermophilic archaeon Pyrococcus furiosus is a monomeric protein (7.5 kDa) tha

125 Pyrococcus furiosus is a strictly anaerobic archaeon (ar

126 The archaeon Pyrococcus furiosus is a strictly anaerobic heterotroph

127 nase (SHI) of the hyperthermophilic archaeon Pyrococcus furiosus is an NADP(H)-dependent heterotetram

128 Rubredoxin from the hyperthermophile Pyrococcus furiosus is the most thermostable protein cha

129 Pyrococcus furiosus LrpA forms a homodimer mainly throug

130 tors: Ptr-H10, fusing the effector domain of Pyrococcus furiosus LrpA, and Ptr-H16, fusing the P. fur

131 We determined the crystal structure of the Pyrococcus furiosus MCM N-terminal domain hexamer bound

132 in DNA double-strand break repair, we report Pyrococcus furiosus Mre11 crystal structures, revealing

133 scattering (SAXS) and crystal structures of Pyrococcus furiosus Mre11 dimers bound to DNA with mutat

134 X-ray crystallography of Pyrococcus furiosus Mre11 indicates that an analogous mu

135 M N-terminal domain of the archaeal organism Pyrococcus furiosus occurs specifically in the hexameric

136 2025) is highly upregulated during growth of Pyrococcus furiosus on elemental sulfur (S(0)).

137 Pyrococcus furiosus phosphoglucose isomerase (PfPGI) is

138 Pyrococcus furiosus phosphoglucose isomerase (PfPGI), an

139 Transcriptional and enzymatic analyses of Pyrococcus furiosus previously indicated that three prot

140 The hyperthermophilic archeon Pyrococcus furiosus produces an extracellular alpha-amyl

141 Here we design structure-based mutations in Pyrococcus furiosus Rad50 to alter protein core plastici

142 Based on the recent Pyrococcus furiosus Rad51 structure, we have used homolo

143 of operons in the hyperthermophilic archaeon Pyrococcus furiosus represents an important step to unde

144 the 2.3 A crystal structure of mre11-3 from Pyrococcus furiosus revealed an active site structure wi

145 re of the protein-protein complex comprising Pyrococcus furiosus RPP21 and RPP29.

146 on Zn(II)-, Ga(III)-, and Ge(IV)-substituted Pyrococcus furiosus rubredoxin demonstrate that the log

147 (Trp) solvation dynamics in water and in the Pyrococcus furiosus rubredoxin protein, including the na

148 static solvent-accessible amide hydrogens of Pyrococcus furiosus rubredoxin range from near the diffu

149 l-atom molecular-dynamics simulations of the Pyrococcus furiosus SecYE, which was determined to be in

150 identification and characterization of SurR, Pyrococcus furiosus sulphur (S(0)) response regulator.

151 perties of the oxidized and reduced forms of Pyrococcus furiosus superoxide reductase (SOR) as a func

152 ction at the mononuclear iron active site of Pyrococcus furiosus superoxide reductase (SOR) through t

153 he site of base exchange; truncated forms of Pyrococcus furiosus TGT retain their specificity for gua

154 ed a gene from the archaeal hyperthermophile Pyrococcus furiosus that reduces O(2)(-).

155 in from the hyperthermophilic archebacterium Pyrococcus furiosus to understand the unusual temperatur

156 n initiation complexes have been formed with Pyrococcus furiosus transcription factors (TBP and TFB1)

157 cations with larger quantities (100 ng) of a Pyrococcus furiosus tryptic digest, but with mass-limite

158 The hyperthermophilic archaeon Pyrococcus furiosus uses carbohydrates as a carbon sourc

159 eductase from the hyperthermophilic anaerobe Pyrococcus furiosus uses electrons from reduced nicotina

160 r E17 to Q in the soluble hydrogenase I from Pyrococcus furiosus using site directed mutagenesis.

161 Pyrococcus furiosus utilizes starch and its degradation

162 gene rgy from the hyperthermophilic archaeon Pyrococcus furiosus was cloned and sequenced.

163 n from the hyperthermophilic archaebacterium Pyrococcus furiosus was examined by a hydrogen exchange

164 c activity in the hyperthermophilic archaeon Pyrococcus furiosus was found to be a homomultimer consi

165 cosidase from the hyperthermophilic archaeon Pyrococcus furiosus was recombinantly produced in Escher

166 ock protein (sHSP) from the hyperthermophile Pyrococcus furiosus was specifically induced at the leve

167 l-II family DNA polymerase from the archaeon Pyrococcus furiosus with the aim of improving ddNTP util

168 f the type-I (Escherichia coli) and type-II (Pyrococcus furiosus) MetAPs in the presence of the react

169 ironment, such as hyperthermophilic archaea (Pyrococcus furiosus), are significantly more compact and

170 lloproteins from an exemplary microorganism (Pyrococcus furiosus).

171 e archaeal transcriptional regulator SurR of Pyrococcus furiosus, a hyperthermophilic anaerobe.

172 We have microinjected Box C/D RNAs from Pyrococcus furiosus, a hyperthermophilic archaeon, into

173 found that the hyperthermophilic archaeaon, Pyrococcus furiosus, actively incorporates DNA fragments

174 This is not the case with Pyrococcus furiosus, an archaeon that grows optimally ne

175 urified from the hyperthermophilic archaeon, Pyrococcus furiosus, an organism that grows optimally at

176 l element for the hyperthermophilic archaeon Pyrococcus furiosus, and many of its iron-containing enz

177 hia coli, Artemisia tridentata (sage brush), Pyrococcus furiosus, and Methanobacter thermautotrophicu

178 cus litoralis, Thermococcus sp. strain ES-1, Pyrococcus furiosus, and Pyrococcus sp. strain ES-4 cont

179 he metabolite was isolated from the organism Pyrococcus furiosus, and structurally characterized thro

180 ation cofactor, S-adenosyl-L-methionine from Pyrococcus furiosus, at 2.7 A.

181 (7.5 kDa) of the hyperthermophilic archaeon, Pyrococcus furiosus, contains a single [4Fe-4S]1+,2+ clu

182 PF0610, a protein from the hyperthermophile Pyrococcus furiosus, has homologues only in other archae

183 protein from the hyperthermophilic archaeon Pyrococcus furiosus, have been determined in the native

184 irst characterized from the hyperthermophile Pyrococcus furiosus, it is unique to the archaeal order

185 hermus thermophilus, Archaeoglobus fulgidus, Pyrococcus furiosus, Methanococcus jannaschii, and Metha

186 x cleaves an endogenous complementary RNA in Pyrococcus furiosus, providing direct in vivo evidence o

187 In Pyrococcus furiosus, psiRNAs occur in two size forms tha

188 obus fulgidus, Methanococcus jannaschii, and Pyrococcus furiosus, respectively.

189 gen exchange results for the rubredoxin from Pyrococcus furiosus, the acidity of these amides was cal

190 etAP from E. coli and the type-II MetAP from Pyrococcus furiosus, the type-I MetAP can be selectively

191 the N-terminal DNA binding domain of Phr of Pyrococcus furiosus, these results suggest that HSR1 and

192 cted 50 representative proteins, mostly from Pyrococcus furiosus, to this pipeline and found that 30

193 lucanase from the hyperthermophilic archaeon Pyrococcus furiosus, was cloned and expressed in Escheri

194 The hyperthermophilic archaeon, Pyrococcus furiosus, was grown on maltose near its optim

195 Herein, the model hyperthermophile, Pyrococcus furiosus, which grows optimally near 100 degr

196 hat confers on a microorganism (the archaeon Pyrococcus furiosus, which grows optimally on carbohydra

197 ned the structures of a PurP orthologue from Pyrococcus furiosus, which is functionally unclassified,

198 amily B DNA polymerases from archaea such as Pyrococcus furiosus, which live at temperatures approxim

199 tryptophan synthase beta-subunit (TrpB) from Pyrococcus furiosus, which mimics the activation afforde

200 gineered subunit of tryptophan synthase from Pyrococcus furiosus, yielding (2S,3S)-beta-methyltryptop

201 (NfnI) from the hyperthermophillic archaeon Pyrococcus furiosus.

202 -keto reductase activity native to AdhD from Pyrococcus furiosus.

203 d a surrogate protein system using RadA from Pyrococcus furiosus.

204 und low-spin FeIII forms of the 1Fe SOR from Pyrococcus furiosus.

205 utagenesis in the hyperthermophilic archaeon Pyrococcus furiosus.

206 sing the thermostable protease isolated from Pyrococcus furiosus.

207 nditions from the hyperthermophilic archaeon Pyrococcus furiosus.

208 NA circles in the hyperthermophilic archaeon Pyrococcus furiosus.

209 ucture of the full-length RAD51 homolog from Pyrococcus furiosus.

210 purified from the hyperthermophilic archaeon Pyrococcus furiosus.

211 e from the hyperthermophilic archaebacterium Pyrococcus furiosus.

212 to 1.2 A from the hyperthermophilic archaeon Pyrococcus furiosus.

213 frame (ORFs) from the genome of the archaeon Pyrococcus furiosus.

214 P-free Rad50 catalytic domain (Rad50cd) from Pyrococcus furiosus.

215 n compared to that from the hyperthermophile Pyrococcus furiosus.

216 ba histolytica and from the archaebacterium, Pyrococcus furiosus.

217 sing Bacillus subtilis, Escherichia coli and Pyrococcus furiosus.

218 purified from the hyperthermophilic archaeon Pyrococcus furiosus.

219 lfovibrio gigas, Desulfovibrio vulgaris, and Pyrococcus furiosus.

220 cohol dehydrogenase (AdhA) into the archaeon Pyrococcus furiosus.

221 ss spectrometer to profile the proteome from Pyrococcus furiosus.

222 bus solfataricus, Sulfolobus islandicus, and Pyrococcus furiosus.

223 to those of V-type ATPases, namely that from Pyrococcus furiosus.

224 nosine, from the hyperthermophilic archaeon, Pyrococcus furiosus.

225 ssed, using the family-B DNA polymerase from Pyrococcus furiosus.

226 l extracts of the hyperthermophilic archaeon Pyrococcus furiosus: a beta-glucosidase, corresponding t

227 hyperthermophiles Pyrococcus horikoshii and Pyrococcus furiosus; however, the form(s) of sulfur that

228 uated using a preliminary set of orthologous Pyrococcus gene pairs, for which it demonstrates an impr

229 genic-sequence content of the three archaeal Pyrococcus genomes to determine the most highly related

230 Six allelic intein sites are common to both Pyrococcus genomes, and two intein insertions occur in e

231 py on the bacterial transporter Glt(Ph) from Pyrococcus horikoshi to examine conformational changes i

232 of comparing domain graphs of two organisms, Pyrococcus horikoshii (an extremophile) and Haemophilus

233 resolution structure of the transporter from Pyrococcus horikoshii (Glt(Ph)) in steered molecular dyn

234 The aspartate transporter from Pyrococcus horikoshii (GltPh) is a model for the structu

235 Our laboratory has recently showed that in Pyrococcus horikoshii (P. horikoshii), the first step us

236 The intracellular protease from Pyrococcus horikoshii (PH1704) and PfpI from Pyrococcus

237 eric serine protease, an oligopeptidase from Pyrococcus horikoshii (PhAAP), revealing a complex, self

238 etrahedrons are addressed by using TET2 from Pyrococcus horikoshii (PhTET2) as a model.

239 structures of NikR from Escherichia coli and Pyrococcus horikoshii .

240 the crystal structure of the gene product of Pyrococcus horikoshii 999 (PH999), a PZAase, and its com

241 th a recent crystal structure of the related Pyrococcus horikoshii A-ATPase E subunit.

242 schii, Methanobacterium thermoautotrophicum, Pyrococcus horikoshii and Archaeoglobus fulgidus.

243 sulfur-reducing anaerobic hyperthermophiles Pyrococcus horikoshii and Pyrococcus furiosus; however,

244 of the structure of l-lysine complexed with Pyrococcus horikoshii class I LysRS (LysRS1) and homolog

245 ervation between P. furiosus and the related Pyrococcus horikoshii clearly delimited the gene start i

246 as been used to kinetically characterise the Pyrococcus horikoshii DNA adenine methyltransferase.

247 ere we analyze the biochemical properties of Pyrococcus horikoshii DNA ligase.

248 Pyrococcus horikoshii Dph2 (PhDph2) is an unusual radica

249 Previous study showed that Pyrococcus horikoshii Dph2 (PhDph2), a novel iron-sulfur

250 ation by showing that Archease and RtcB from Pyrococcus horikoshii function in tandem, with Archease

251 GltPh from Pyrococcus horikoshii is a homotrimeric Na(+)-coupled as

252 ase domain of the hyperthermophilic archaeon Pyrococcus horikoshii is strongly regulated by the nativ

253 e variants were selected for analysis of the Pyrococcus horikoshii LysRS1-tRNALys docking model.

254 ning to evaluate the interaction between the Pyrococcus horikoshii Nop5p domain and an L7Ae box C/D R

255 The Pyrococcus horikoshii OT3 genome contains a gene (PH0601

256 eprogramming the anticodon-binding pocket of Pyrococcus horikoshii ProRS (PhProRS), we were able to i

257 Here, we report two crystal structures of Pyrococcus horikoshii RNA-splicing ligase RtcB in comple

258 Here, we present three structures of Pyrococcus horikoshii RtcB complexes that capture snapsh

259 reviously yielded a crystal structure of the Pyrococcus horikoshii RtcB protein containing a new prot

260 r dynamics simulations of three forms of the Pyrococcus horikoshii species of NikR including two apo-

261 of diphthamide biosynthesis in the archaeon Pyrococcus horikoshii uses a novel iron-sulphur-cluster

262 Recently, the X-ray structure of NadA from Pyrococcus horikoshii was solved to 2.0 A resolution.

263 endoglucanase EGPh from the hypothermophilic Pyrococcus horikoshii was transaminated with pyridoxal-5

264 nes from both Mycobacterium tuberculosis and Pyrococcus horikoshii were cloned, and their protein pro

265 s (Escherichia coli, Heliobacter pylori, and Pyrococcus horikoshii) of NikR reveal large conformation

266 moautotrophicum, Archaeoglobus fulgidus, and Pyrococcus horikoshii) revealed 1326 orthologous sets, o

267 archaeal species (Archaeoglobus fulgidus and Pyrococcus horikoshii).

268 on the homologous sequence from subunit B of Pyrococcus horikoshii, an organism that lacks an actin c

269 n acceptor substrates from Escherichia coli, Pyrococcus horikoshii, and Homo sapiens.

270 nt of a glutamate transporter homologue from Pyrococcus horikoshii, Glt(Ph), which is trapped in the

271 mate transporter homologue from the archaeon Pyrococcus horikoshii, GltPh, showed that distinct trans

272 GltPh, an archeal EAAT homolog from Pyrococcus horikoshii, is currently the only member with

273 tem Glt(Ph), an archaeal EAAT homologue from Pyrococcus horikoshii, limited trypsin proteolysis exper

274 ate transporter homolog from archaebacterium Pyrococcus horikoshii, sodium/aspartate symporter GltPh,

275 hermophilic Archaea, Pyrococcus furiosus and Pyrococcus horikoshii, was assessed by analysis of compl

276 aryotic glutamate transporter homologue from Pyrococcus horikoshii.

277 Trichoderma viride, Thermogata maritima, and Pyrococcus horikoshii.

278 l-tRNA synthetase is from the achaebacterium Pyrococcus horikoshii.

279 fied in the genomes of Pyrococcus abyssi and Pyrococcus horikoshii.

280 zyme, an endoglucanase from the thermophilic Pyrococcus horikoshii.

281 ed studies of the monofunctional ligase from Pyrococcus horikoshii.

282 (e.g., Bacillus licheniformis TAKA-term and Pyrococcus kodakaraensis KOD1 alpha-amylases, respective

283 imately twice as much tRNA as did AspRS from Pyrococcus kodakaraensis or Ferroplasma acidarmanus.

284 In contrast, Asp-tRNA formed by the Pyrococcus or Ferroplasma enzymes was not a substrate fo

285 ADR is not essential for S(0) respiration in Pyrococcus or Thermococcus but appears to participate in

286 erase of the extremely thermophilic archeon, Pyrococcus sp. GB-D.

287 us sp. strain ES-1, Pyrococcus furiosus, and Pyrococcus sp. strain ES-4 contain an enzyme which catal

288 duplication preceding the divergence of the Pyrococcus species.

289 cognition of U35 and U36 was confined to the pyrococcus-spirochete grouping within the archaeal branc

290 [encoding O-acetylserine (thiol)-lyase-B] in Pyrococcus spp., Sulfolobus solfataricus, and Thermoplas

291 yperthermophiles Methanothermus fervidus and Pyrococcus strain GB-3a) have been determined by circula

292 ervidus; and hPyA1 from the hyperthermophile Pyrococcus strain GB-3a.

293 el (1.7%) of aspartylation of unfractionated Pyrococcus tRNA compared with that achieved by the wild-

294 Pyrococcus woesei (Pw) is a hyperthermophilic archaeal o

295 n of the TATA box binding protein (TBP) from Pyrococcus woesei (Pw) with an oligonucleotide containin

296 pendage combination used the polymerase from Pyrococcus woesei (Pwo) and the 5'-tBu-SS-CH2-CH2-C [tri

297 from the thermophilic and halophilic archaea Pyrococcus woesei (PwTBP) with an oligonucleotide contai

298 Pyrococcus furiosus and Pyrococcus woesei grow optimally at temperatures near 10

299 from the halophile/hyperthermophile organism Pyrococcus woesei, is adapted to high concentrations of

300 a DNA target, all from the hyperthermophile Pyrococcus woesei.