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1 16S 454 FLX titanium series pyrosequencing (Roche).
2 imens by IDEIA PCE EIA (Dako) and Cobas PCR (Roche).
3 ed with the MagNA Pure LC extraction system (Roche).
4 ared with laboratory pVL assessment (TaqMan, Roche).
5 M was sequenced (RNA-Seq) using GS FLX+ (454/Roche).
6 h Network, the Medical Research Council, and Roche.
7 ma Research Trust, Lymphoma Association, and Roche.
8 t protease inhibitor (saquinavir, Hoffman La-Roche, 1995) and two decades since the approval of the f
9 nomes exon pilot project generated using the Roche 454 and Illumina sequencing platforms, and were ab
10 Users can turn a collection of reads (from Roche 454 chemistry) or assembled contigs (from any sequ
12 us strain genome sequencing was performed on Roche 454 GS FLX Titanium, then AB SOLiD instruments.
13 umina (Genome Analyzer, HiSeq, MiSeq, .etc), Roche 454 GS System, Applied Biosystems SOLiD System, He
21 rom selected multiplex T1D families, we used Roche 454 sequencing with Conexio Genomics ASSIGN ATF 45
24 resulting sample with both Illumina GAII and Roche 454, and obtained data with equally high specifici
30 Yoka poxvirus genome using a combination of Roche/454 and Illumina next-generation sequencing techno
31 inGAP can be applied to the mapping of both Roche/454 and Illumina reads with no restriction of read
32 detection assay is made compatible with the Roche/454 Genome Sequencer FLX Titanium next-generation
37 th high sensitivity and specificity, in both Roche/454 sequencing of individuals and deep Illumina/So
40 IV reverse transcriptase (RT) was performed (Roche/454), and the sequences were screened for nucleosi
41 oughput and relatively short read lengths of Roche/454, Illumina/Solexa, and other platforms have spu
43 y (hs) cTn assays (hs-cTnI, Abbott; hs-cTnT, Roche) among 2300 consecutive patients with suspected AM
44 .3% for the Roche Cobas assay, 94.5% for the Roche Amplicor assay, 93.0% for the Biocentric assay, an
46 y two commercially available RNA assays, the Roche Amplicor HIV-1 Monitor and the bioMerieux NucliSen
49 -1 subtype detection, and correlation to the Roche Amplicor HIV-1 monitor test, version 1.5 (Amplicor
50 y (LCx), Bayer Versant HIV-1 RNA 3.0 (bDNA), Roche AMPLICOR HIV-1 MONITOR v1.5 (Monitor v1.5), and bi
52 [RT-PCR]), Roche TaqMan RUO (Roche RT-PCR), Roche Amplicor Monitor HCV 2.0 (Roche Monitor), and Baye
53 etectable serum hepatitis B virus (HBV) DNA (Roche Amplicor Monitor polymerase chain reaction [PCR] a
54 ma viral loads using the Abbott test and the Roche Amplicor Monitor test showed a mean difference of
55 three FDA-approved platforms: UltraSensitive Roche Amplicor Monitor, v1.5 (Monitor), the Abbott RealT
56 s tested individually and in pools using the Roche Amplicor PCR for C. trachomatis and N. gonorrhoeae
57 obeTec SDA, Gen-Probe Aptima Combo2 TMA, and Roche Amplicor PCR) for detection of C. trachomatis and
58 nson ProbeTec, Gen-Probe Aptima Combo 2, and Roche Amplicor tests to detect Chlamydia trachomatis and
59 al conditions, viral RNA was detected by the Roche Amplicor UltraSensitive assay in whole-milk, skim
60 virus type 1 (HIV-1) plasma RNA levels using Roche AMPLICOR version 1.5 (HIV RNA) is an integral part
61 tion [PCR] results for C. trachomatis DNA by Roche Amplicor) and 25 true-negative specimens (direct o
63 ted a sensitivity of 100% (46/46), while the Roche analyte-specific reagents (ASR) and LDT showed sen
64 a laboratory-developed test (LC CMV) (using Roche analyte-specific reagents [ASR] on the LightCycler
65 nd ribavirin had HCV RNA <LLOQ at EOT by the Roche and Abbott assays, but only 38 achieved SVR12 (PPV
66 solid form screens conducted at Hoffmann-La Roche and Eli Lilly and Company over the course of 8+ an
68 gle-nucleotide polymorphisms (SNPs) from the Roche and Genomic Institute of the Novartis Research Fou
70 hilst at least one in two compounds from the Roche and Lilly set display polymorphism with a higher e
73 injury and apoptosis detectable with TUNEL (Roche) and dual annexin V and propidium iodide staining.
74 ining data generated from 454 Life Sciences (Roche) and Illumina (formerly known as Solexa sequencing
76 was accomplished using a combination of 454 (Roche) and Illumina sequencing and community-based fundi
80 real-time PCR method using the LightCycler (Roche Applied Science, Indianapolis, IN) was compared to
81 ssing with the MagNA Pure LC instrument (MP; Roche Applied Science, Indianapolis, IN) were evaluated
82 NA to develop a rapid real-time LightCycler (Roche Applied Science, Indianapolis, Ind.) PCR assay for
83 instrument and total nucleic acid reagents (Roche Applied Science, Indianapolis, Ind.) to extract hu
84 e PCR method, the LightCycler Strep-A assay (Roche Applied Science, Indianapolis, Ind.), to those of
87 A screening assay for real-time LightCycler (Roche Applied Science, Mannheim, Germany) PCR identifica
88 48 instrument (Qiagen, Inc.) and MagNA Pure (Roche Applied Sciences) methods, to two manual methods,
91 SR in combination with the High Pure system (Roche ASR-HP) showed a sensitivity of 1.4 log(10) IU/ml
92 on (R(2) = 0.79) and agreement were poor for Roche ASR-HP, with bias relative to concentration and ge
95 the Abbot assay was more sensitive than the Roche assay for both C. trachomatis and N. gonorrhoeae.
96 assay and those detected by the Siemens and Roche assays (92.0% and 88% correlation coefficient of t
98 Basel, Switzerland) and daclizumab (Zenapax; Roche, Basel, Switzerland) combined (relative risk, 0.54
99 h factor (VEGF) agent ranibizumab (Lucentis; Roche, Basel, Switzerland) compared with ranibizumab mon
100 ion, chlorination, and amination of the homo-Roche building blocks was performed to demonstrate that
102 al [CI], 0.95 to 1.00) for the AmpliSens and Roche CAP/CTM Qual assays and 0.96 (95% CI, 0.90 to 0.98
104 tem cytomegalovirus (CMV) DNA (version 2.0), Roche CMV UL54 analyte-specific reagent, and QIAGEN Real
106 mydia trachomatis and Neisseria gonorrhoeae (Roche cobas 4800), a fully automated system, was compare
111 at the amplicon generated by the widely used Roche COBAS Amplicor Hepatitis C Virus Test, version 2.0
113 DNA strand displacement assay (SDA), and the Roche Cobas Amplicor PCR was defined by using a rotating
114 me PCR assay by comparison with the existing Roche COBAS AmpliPrep/AMPLICOR MONITOR conventional PCR
115 ed with the AmpliSens DNA-HIV-FRT assay, the Roche COBAS AmpliPrep/COBAS TaqMan (CAP/CTM) HIV-1 Qual
119 e assessed: the Abbott RealTime HBV IUO, the Roche Cobas AmpliPrep/Cobas TaqMan HBV test, the Roche C
122 results were compared with results from the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 test, v2.0.
123 tima assay was also compared to those of the Roche COBAS AmpliPrep/COBAS TaqMan HIV-1 v.2 (CAP/CTM) a
124 mated real-time HIV-1 viral load assays, the Roche Cobas AmpliPrep/Cobas TaqMan test and the Abbott R
125 ots (DPS) with a commonly used VL assay, the Roche Cobas Ampliprep/Cobas TaqMan V.2.0 (CAP/CTM).
126 fied inefficiently with gSCA compared to the Roche Cobas Ampliprep/TaqMan 2.0, whereas all 10 samples
127 iagnostic Medical Devices Directive-approved Roche COBAS AmpliPrep/TaqMan96 real-time PCR assay by co
128 re 96.6% for the Abbott assay, 96.3% for the Roche Cobas assay, 94.5% for the Roche Amplicor assay, 9
129 inflammatory biomarkers were measured using Roche cobas c702 and Meso Scale Discovery V-Plex Plus: h
131 point was proportion with HBV DNA <69 IU/mL (Roche COBAS Taqman assay; Roche Molecular Systems, Inc,
132 e Cobas AmpliPrep/Cobas TaqMan HBV test, the Roche Cobas TaqMan HBV test with HighPure system, and th
133 urements of HCV RNA were performed using the Roche COBAS TaqMan HCV test and the Abbott RealTime HCV
135 We evaluated the Abbott RealTime (ART) and Roche Cobas TaqMan Hepatitis C virus (HCV) viral load as
136 st) and compared results with those of LABT (Roche COBAS TaqMan HIV-1 Qualitative test) with respect
137 he use of an analyte-specific reagent (ASR) (Roche COBAS TaqMan48 [CTM48] HCV) after manual and autom
138 ulvovaginal-swab and urine specimens by PCR (Roche Cobas) or strand displacement amplification (SDA;
139 tibodies from different vendors (Vector, BD, Roche, Dako, Novocastra, and Accurate) and DNA denaturat
141 NA was quantified by using Amplicor Monitor (Roche Diagnostic Systems, Inc, Branchburg, NJ) from 275
142 -Probe Inc.), the Amplicor CT/NG Assay (PCR; Roche Diagnostics Corp.), or the BD ProbeTec ET System C
144 n instruments, the MagNA Pure LC instrument (Roche Diagnostics Corporation) and the lower-capacity Ma
146 , the LightCycler vanA/vanB detection assay (Roche Diagnostics Corporation, Indianapolis, Ind.) to th
147 ghtCycler Strep B analyte-specific reagents (Roche Diagnostics Corporation, Indianapolis, Ind.), were
149 or Chlamydia trachomatis by using COBAS PCR (Roche Diagnostics) and ligase chain reaction LCR (Abbott
150 d was extracted using the MagNA Pure system (Roche Diagnostics) and subsequently tested by each PCR m
151 tion capacity was documented by LightCycler (Roche Diagnostics) measurements of virion-associated hep
152 eared rapid (<20 min) PCR assay (Cobas Liat; Roche Diagnostics) to our routine influenza A and B real
153 the Linear Array HPV genotyping assay (LA) (Roche Diagnostics), INNO-LiPA HPV Genotyping Extra (LiPA
154 tics of the COBAS Amplicor HBV Monitor test (Roche Diagnostics), which measures hepatitis B virus (HB
155 energy transfer probes and the LightCycler (Roche Diagnostics), which will detect the presence of th
157 standard troponin T and testing for hs-cTnT (Roche Diagnostics, Basel, Switzerland) at presentation.
159 were sequenced with the 454GS FLX Titanium (Roche Diagnostics, Indianapolis, IN) and GAIIx (Illumina
160 ydia trachomatis and N. gonorrhoeae (CT/NG) (Roche Diagnostics, Indianapolis, IN) followed by confirm
161 ed to the TaqMan HCV load ASR assay (TaqMan; Roche Diagnostics, Indianapolis, IN) that targets the 5'
162 al-time PCR analyte-specific reagents (ASR) (Roche Diagnostics, Indianapolis, IN) were also tested by
163 agen, Gaithersburg, MD), the cobas HPV test (Roche Diagnostics, Indianapolis, IN), and the APTIMA HPV
166 using the LINEAR ARRAY HPV Genotyping Test (Roche Diagnostics, Indianapolis, Indiana), which detects
170 hs-cTn was measured with 3 assays (hs-cTnT, Roche Diagnostics; hs-cTnI, Beckman-Coulter; hs-cTnI Sie
171 d B viruses (Alere i [Alere] and cobas Liat [Roche Diagnostics]) with the influenza A and B virus tes
172 otherapeutics, stimulated by the Hoffmann-La Roche discovery that Nutlin-3 can restore apoptosis in c
177 ic hydrogenation routes to homologues of The Roche ester tend to be restricted to hydrogenations of i
180 as those produced by the 454 Life Sciences (Roche) Genome Sequencer, and can scale to large data set
186 ose recovered with the manual methods (i.e., Roche High Pure kit [133,900 CFU/ml], QIAamp DNA Mini ki
188 ncordance in HCV RNA assessments between the Roche High Pure System/Cobas TaqMan and Abbott RealTime
189 sults from samples tested prospectively with Roche High Pure TaqMan HCV 2.0 test (HPS) were compared
190 Human papillomavirus (HPV) was detected by Roche HPV Linear Array at enrollment, and at 6, 12, and
194 ncing technologies (e.g., 454 Life Sciences [Roche], Illumina sequencing [formerly Solexa sequencing]
199 National Institutes of Health, Genentech, Roche Laboratories, Lilly Research Laboratories, and Pre
201 erence laboratories using two platforms, the Roche LightCycler 480 system and the Applied Biosystems
202 able solely by melt curve analysis using the Roche LightCycler HSV 1/2 analyte-specific reagent real-
204 e and have recently been commercialized (eg, Roche LightCycler SeptiFast and T2 Biosystems T2Candida)
207 f HC2-positive results were confirmed by the Roche line blot assay, compared to 77.2% of those at an
209 rcumcision trial in Rakai, Uganda, using the Roche Linear Array assay, which detects 37 HPV genotypes
214 e compared the cobas HPV test (cobas) to the Roche Linear Array HPV genotyping assay (LA) and cytolog
216 ere evaluated for 37 HPV genotypes using the Roche LINEAR ARRAY HPV Genotyping Test (Roche Molecular
219 cervical samples for HPV DNA detection using Roche Linear Array were collected semiannually for two y
220 ected penile swab sample for HPV genotyping (Roche Linear Array) and completed a demographic and risk
225 rawn overview map of metabolism based on the Roche map satisfies (ii) and comes close to satisfying (
228 ated hrHPV tests, the cobas HPV test (cobas, Roche Molecular Systems) and Hybrid Capture 2 (hc2, Qiag
229 ) performed on the COBAS TaqMan 48 Analyzer (Roche Molecular Systems) currently relies on a manual sa
231 s C virus test, version 2.0 (COBAS AMPLICOR; Roche Molecular Systems), with TaqMan HCV detecting two
232 MPLICOR Hepatitis C Virus Test, version 2.0 (Roche Molecular Systems, Branchburg, N.J.) following man
233 ratories, Abbott Park, Ill.]; PCR [Amplicor; Roche Molecular Systems, Branchburg, N.J.]; and transcri
238 MPLICOR Hepatitis C Virus Test, version 2.0; Roche Molecular Systems, Inc.), and COBAS TaqMan (COBAS
239 B virus (HBV) analyte-specific reagent (ASR; Roche Molecular Systems, Inc., Branchburg, NJ) is design
240 OBAS AMPLICOR HCV MONITOR Test, version 2.0; Roche Molecular Systems, Inc., Branchburg, NJ), COBAS AM
241 Corp., Gaithersburg, MD), Linear Array (LA; Roche Molecular Systems, Pleasanton, CA), and Amplicor (
243 the Roche LINEAR ARRAY HPV Genotyping Test (Roche Molecular Systems, Pleasanton, California), and fa
247 for acute HIV infection) was compared with a Roche Monitor HIV RNA polymerase chain reaction assay.
248 ll correlated well with the results from the Roche Monitor Test (r = 0.83 to 0.96, r = 0.84 to 0.99,
249 che RT-PCR), Roche Amplicor Monitor HCV 2.0 (Roche Monitor), and Bayer VERSANT HCV RNA 3.0 (Bayer bDN
252 a method for whole-exome sequencing coupling Roche/NimbleGen whole exome arrays to the Illumina DNA s
254 mmercially available critical care analyzer (Roche OPTI CCA) with precision better than +/- 1 mM (1 S
255 ew potassium sensor is currently used in the Roche OPTI CCA, a commercially available whole blood ana
256 swab specimens and equivalent to that of the Roche PCR for the detection of C. trachomatis with cervi
261 erification process between the end user and Roche Pharmaceuticals, and mandatory destruction of empt
262 oup, under the sponsorship of Genentech Inc, Roche Pharmaceuticals, and OSI Pharmaceuticals, Inc, was
263 prednisone, mycophenolate mofetil (CellCept, Roche Pharmaceuticals, Basel, Switzerland), and cyclospo
265 scopy: the Hybrid Capture 2 (Qiagen), Cobas (Roche), PreTect HPV-Proofer (NorChip), Aptima HPV (Gen-P
267 meras using a nSSU data set derived from 454 Roche pyrosequencing of replicated, large control pools
268 udinal and cross-sectional samples using 454/Roche pyrosequencing, in total analyzing 174,185 sequenc
269 ethods were prospectively employed to impact Roche research projects, with the aim of highlighting th
270 Discrepant results were tested using the Roche reverse line blot (RLB) or Linear Array (LA) assay
271 ent with clinician-obtained brushes when the Roche Reverse Line Blot Assay (RLBA) was used (for swabs
274 the mean viral load value obtained with the Roche RT-PCR assay was, on average, 0.15 log10 lower tha
275 nsitivity and linear range of the Abbott and Roche RT-PCR assays enable them to be used for HCV diagn
278 anscription-PCR [RT-PCR]), Roche TaqMan RUO (Roche RT-PCR), Roche Amplicor Monitor HCV 2.0 (Roche Mon
281 s processed on the MagNA Pure LC instrument (Roche RUO-MPLC) and Abbott analyte-specific reagents (AS
282 national units (IU) of IFN-alpha (Roferon-A; Roche s.p.a., Milano, Italy) subconjunctivally inside th
283 ogies such as Illumina's Solexa platform and Roche's 454 approach provide new avenues for investigati
284 ate performance on control data sequenced on Roche's 454 platform, and compare the results to the mos
286 ercial next-generation sequencing platforms: Roche's 454, Illumina's Solexa and Applied Biosystems' S
288 We included all published and unpublished Roche-sponsored randomised placebo-controlled, double-bl
289 orm and compared the results to those of the Roche TaqMan Analyte-Specific Reagent (TaqMan) and Bayer
291 (Abbott reverse transcription-PCR [RT-PCR]), Roche TaqMan RUO (Roche RT-PCR), Roche Amplicor Monitor
293 apid virologic response (mRVR; VL <25 IU/mL [Roche TaqMan] at week 4 and undetectable at weeks 8 to 2
295 The finding by scientists at Hoffmann-La Roche that cis-imidazolines could disrupt the protein-pr
296 The sensitivities of the version 1.5 and 1.0 Roche UltraSensitive AMPLICOR HIV-1 MONITOR tests were c
298 ded sequencing using the GS20 Sequencer (454/Roche), we found that over 99.8% of obtained sequences c
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