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1 S. cerevisiae declined in fitness along the evolution ex
2 S. cerevisiae GAL genes thus encode a regulatory program
3 S. cerevisiae Hop1 and Red1 are essential structural com
4 S. cerevisiae is found in multiple environments-one of w
5 S. cerevisiae Sir1, enriched at the silencers of HMLalph
6 S. cerevisiae was grown in YNB media, containing randomi
7 checkpoint with checkpoint initiators 9-1-1 (S. cerevisiae Ddc1-Mec3-Rad17 and human Rad9-Rad1-Hus1)
8 acterising 1,068 and 970 polymorphisms in 34 S. cerevisiae and 26 S. paradoxus strains respectively.
9 ually edited and annotated the genomes of 93 S. cerevisiae strains from multiple geographic and envir
11 n unexpected resistance to cytotoxicity by a S. cerevisiae mutant with ablated post-transfer editing
12 ertebrate cofilin rescues the viability of a S. cerevisiae cofilin deletion mutant only when the stif
13 Here we identified the mRNA targets of a S. cerevisiae PUF protein, Puf5p, by ultraviolet-crossli
14 to analyze pheno-metabolomic diversity of a S. cerevisiae strain collection with different origins.
20 atabolism genes, conferred the ability of an S. cerevisiae strain to efficiently metabolize DEHU and
21 to TORC1 may differ between C. albicans and S. cerevisiae The converse direction of signaling from T
25 n of Arabidopsis, mammalian, C. elegans, and S. cerevisiae RBPs reveals a common set of proteins with
27 he luminal domains of S. cerevisiae Gpi8 and S. cerevisiae Gpi16 do not interact directly, nor do the
29 organisms--H. sapiens, D. melanogaster, and S. cerevisiae--and show that, as compared to other annot
30 indicate that APA mechanisms in S. pombe and S. cerevisiae are largely different: S. pombe has many o
31 on some key differences between S. pombe and S. cerevisiae is included for readers with some familiar
32 consistent differences between in vitro and S. cerevisiae (in vivo) Cas9 cleavage specificity profil
34 activity, MBL2 and NOD2 polymorphisms, anti-S. cerevisiae antibody levels and clinical Crohn's disea
36 that the Pcasf1 cDNA expressed in asf1Delta S. cerevisiae cells can restore growth to wild-type leve
37 proteins in the same individual asynchronous S. cerevisiae cells, with and without DNA damage by meth
39 n has undergone significant rewiring between S. cerevisiae and C. lusitaniae, and that a concerted se
40 th corresponding experimental data from both S. cerevisiae and human cells and provides a quantitativ
41 ates supporting significant activity of both S. cerevisiae and E. coli HADs includes 28 common metabo
42 imination against non-protein amino acids by S. cerevisiae PheRS and support a non-canonical role for
44 luminal domain of Saccharomyces cerevisiae (S. cerevisiae) Gpi8 using different expression systems,
45 (MDSet) in interaction networks of E. coli, S. cerevisiae and H. sapiens, defined as subsets of prot
47 size differences among APA isoforms than did S. cerevisiae PASs in different locations of gene are su
49 ces cerevisiae First, analysis of 36 diverse S. cerevisiae isolates revealed evidence of numerous pas
50 cursor into two modules, expressed in either S. cerevisiae or E. coli, neither of which can produce t
52 e design and synthesis of synIII establishes S. cerevisiae as the basis for designer eukaryotic genom
53 f gene regulation in a single-cell eukaryote S. cerevisiae is affected by interactions between transc
55 action of DspA/E, we screened the Euroscarf S. cerevisiae library for mutants resistant to DspA/E-in
57 enced 28 genomes from experimentally evolved S. cerevisiae lines and found more mutations in duplicat
58 the direct binding of recombinant expressed S. cerevisiae ScUpc2 and pathogenic Candida albicans CaU
59 oped a rapid and efficient xylose-fermenting S. cerevisiae through rational and inverse metabolic eng
62 pigenetic states in fungi that diverged from S. cerevisiae ~200 million years ago, and in which gluco
63 ochemical studies of RNA bound exosomes from S. cerevisiae revealed that the Exo9 central channel gui
64 f seven galactose (GAL) metabolic genes from S. cerevisiae, when introduced together into S. bayanus,
65 known now 26) is a putative ENT homolog from S. cerevisiae that is expressed in vacuole membranes.
66 f the UBL domain of the WDR12 homologue from S. cerevisiae at 1.7 A resolution and demonstrate that h
67 s-end transport using purified proteins from S. cerevisiae and dissect the mechanism using single-mol
68 the ubiquitin-bound structure of Rpn11 from S. cerevisiae and the mechanisms for mechanochemical cou
70 - and six-gene pathways by VEGAS to generate S. cerevisiae cells synthesizing beta-carotene and viola
71 ic forms in the heterologous expression host S. cerevisiae where we were able to apply yeast genetic
73 ol can be successfully exploited to identify S. cerevisiae strains in any kind of complex samples.
81 technique for visualization of the areas in S. cerevisiae cells which contain higher amount of calci
86 Our data suggest that eccDNAs are common in S. cerevisiae, where they might contribute substantially
92 sential for the normal functions of eEF1A in S. cerevisiae However, eEF1A glutaminylation slightly re
95 hrome P450 enzyme DesC was also expressed in S. cerevisiae and was found to regio- and stereoselectiv
97 reduces the levels of gfp mRNA expression in S. cerevisiae cells, with a concomitant decrease in gree
99 ogue of IME2, a 'diploid-specific' factor in S. cerevisiae, and STE12, the master regulator of S. cer
101 HEM15 encoding the enzyme ferrochelatase in S. cerevisiae and performed a genetic suppressor screen.
103 capitulate wild-type function and fitness in S. cerevisiae We also find that the electrostatic charge
104 for the Paf1C in snoRNA 3'-end formation in S. cerevisiae, implicates the participation of transcrip
105 and compared them to those already found in S. cerevisiae We observed common features between the tw
111 s nonacetylatable Smc3 mutants are lethal in S. cerevisiae, they are not in S. pombe We show that the
113 between Sch9 and sphingolipid metabolism in S. cerevisiae in vivo based on the observation that the
114 tions to rewire central carbon metabolism in S. cerevisiae, enabling biosynthesis of cytosolic acetyl
117 tes the deposition of these modifications in S. cerevisiae under conditions of replicative stress.
120 able by A/T frequency in S. pombe but not in S. cerevisiae, suggesting that the genomes and DNA bindi
121 C1 to the PHO regulon previously observed in S. cerevisiae was genetically shown in C. albicans using
123 titative measures of nucleosome occupancy in S. cerevisiae, Schizosaccharomyces pombe, and human cell
124 an short ones, a feature that is opposite in S. cerevisiae Differences in PAS placement between conve
125 ltaneously deleting a duplicate gene pair in S. cerevisiae reduces fitness significantly more than de
126 terpenes via the mevalonate (MEV) pathway in S. cerevisiae, we detail procedures for extraction and d
133 fine Ptc6p as the primary PDC phosphatase in S. cerevisiae Our analyses further suggest additional su
134 etion mutants of kinases and phosphatases in S. cerevisiae we show that epistatic NEMs can point to m
135 an, i.e., the major carbohydrates present in S. cerevisiae, and principal components analysis reveale
136 ering high-level sesquiterpene production in S. cerevisiae often requires iterations of strain modifi
137 fer a revised view of mitotic progression in S. cerevisiae that augments the relevance of mechanistic
138 cription from the synthetic tetO promoter in S. cerevisiae is dominated by its dependence on the cell
146 r genes (25S rDNA, ARX1, CTT1, and RPL30) in S. cerevisiae under normal and stressed conditions.
151 likely to contribute to glucose signaling in S. cerevisiae on the level of ScHxk2-S15 phosphorylation
154 systematically identified its substrates in S. cerevisiae using phosphoproteomics and bioinformatics
155 E. coli and triacetic acid lactone (TAL) in S. cerevisiae revealed that the identified interventions
159 ssue, Deng et al. (2015) demonstrate that in S. cerevisiae RPA and Mre11-Sae2 cooperate to prevent th
162 dinately suppress pervasive transcription in S. cerevisiae and murine embryonic stem cells (mESCs).
163 unidirectional nature of lysine transport in S. cerevisiae by the extraordinary kinetics of Lyp1 and
164 compared with the APOL1 nonrisk variants in S. cerevisiae, including impairment of vacuole acidifica
167 we have transferred human fragile zones into S. cerevisiae in the context of a genetic assay to under
168 ification and characterization of the 89-kDa S. cerevisiae Sen1 helicase domain (Sen1-HD) produced in
169 e evaluated the ssDNA binding of full-length S. cerevisiae Cdc13 to its minimal substrate, Tel11.
171 is a powerful tool for mRNA imaging in live S. cerevisiae with high spatial-temporal resolution and
172 In this study, we surface engineered living S. cerevisiae cells by decorating quantum dots (QDs) and
175 ide of cell wall protein alpha-agglutinin of S. cerevisiae, the serine-threonine-rich region of epith
176 is consistent with a genome-wide analysis of S. cerevisiae, which reveals that under favourable growt
178 bly system), exploits the native capacity of S. cerevisiae to perform homologous recombination and ef
181 light into the holistic characterization of S. cerevisiae pheno-metabolome in must fermentative cond
182 by the construction and characterization of S. cerevisiae strains whose growth depended on two nonna
184 mainly formed and degraded in the cytosol of S. cerevisiae cells in a process that couples D-2HG meta
185 ined the role of TFIID by rapid depletion of S. cerevisiae TFIID subunits and measurement of changes
187 We determined that the tandem SH2 domain of S. cerevisiae Spt6 binds the linker region of the RNA po
188 T, our data show that the luminal domains of S. cerevisiae Gpi8 and S. cerevisiae Gpi16 do not intera
189 g that deletion of the activation domains of S. cerevisiae Med2 and Med3, as well as C. dubliniensis
192 of-principle, we explore the interactions of S. cerevisiae Proliferating Cell Nuclear Antigen (yPCNA)
193 effects on mRNA recruitment of a library of S. cerevisiae eIF3 functional variants spanning its 5 es
194 a previously unappreciated wild lifestyle of S. cerevisiae outside the restrictions of human environm
195 ion is supported by lower-resolution maps of S. cerevisiae nucleosome lengths based on micrococcal nu
196 s dominula social wasps favors the mating of S. cerevisiae strains among themselves and with S. parad
198 revisiae, and STE12, the master regulator of S. cerevisiae mating, were each required for progression
199 ff-line 2D LC-MS/MS analysis (HILIC-RPLC) of S. cerevisiae whole cell lysate has been used to acquire
200 Off-line 2D LC-MS/MS analysis (SCX-RPLC) of S. cerevisiae whole cell lysate was used to generate a r
202 idy is well tolerated in the wild strains of S. cerevisiae that we studied and that the group of gene
203 n natural variants and laboratory strains of S. cerevisiae, we evaluated the karyotype and gene expre
206 sent a cryo-electron microscopy structure of S. cerevisiae Hrd1 in complex with its endoplasmic retic
208 ultipurpose resource to advance the study of S. cerevisiae population genetics, quantitative genetics
209 derivatives, but the endogenous substrate of S. cerevisiae Ydr109c and human FGGY has remained unknow
212 ustrated by the finding that YMR291W/TDA1 of S. cerevisiae and the homologous KLLA0A09713 gene of Klu
213 isiae; inoculum size and inoculation time of S. cerevisiae; fermentation time and temperature) result
214 t viability highlights inherent tolerance of S. cerevisiae to changes in gene order and overall chrom
215 tage relative to S. bayanus; transgenesis of S. cerevisiae GAL promoter alleles or GAL coding regions
217 effects of amphotericin-B and miconazole on S. cerevisiae through the device's time-dependent freque
218 hologs identified in mammals, C. elegans, or S. cerevisiae in addition to 595 novel candidate RBPs.
219 tein interaction networks of five organisms, S. cerevisiae, H. sapiens, D. melanogaster, A. thaliana,
220 testine of social wasps hosts highly outbred S. cerevisiae strains as well as a rare S. cerevisiaexS.
222 C. elegans dauer larvae and stationary phase S. cerevisiae require elevated amounts of the disacchari
223 constituted retrotranslocation with purified S. cerevisiae proteins, using proteoliposomes containing
226 e previously reported to bind to recombinant S. cerevisiae cells, expressing members of the C. albica
228 er suggest additional substrates for related S. cerevisiae phosphatases and describe the overall phos
230 ntified Ptc6p as the primary-and likely sole-S. cerevisiae PDC phosphatase, closing a key knowledge g
231 n integrated database covering four species (S. cerevisiae, C. elegans, D. melanogaster and H. sapien
233 enylation sites (PASs) in two yeast species, S. cerevisiae and S. pombe Although >80% of the mRNA gen
234 to produce bioactive yields that allow spent S. cerevisiae growth media to have antibacterial action
235 o higher eukaryotes, the extensively studied S. cerevisiae dynein behaves distinctly from mammalian d
236 be appears to have evolved less rapidly than S. cerevisiae so that it retains more characteristics of
244 inase remains unclear, but we speculate that S. cerevisiae Ydr109c and human FGGY could act as metabo
248 G1 varies greatly around origins across the S. cerevisiae genome, and nucleosome occupancy around or
249 evisiae strains, D. hansenii genes adopt the S. cerevisiae polyadenylation profile, indicating that t
250 /- 20.1 nmol*min(-1)*mg(-1)) that allows the S. cerevisiae strain to show significant growth with xyl
252 alization of leading-strand synthesis by the S. cerevisiae replisome at the single-molecule level.
256 dies have suggested that hub proteins in the S. cerevisiae physical interaction network are more like
257 In this study, we investigate changes in the S. cerevisiae proteome resulting from cultures grown in
259 cterization of the dynamic modularity of the S. cerevisiae interactome that incorporated gene express
263 uding antibiotics and the prion state of the S. cerevisiae translation termination factor eRF3, Rps23
264 th efficient mating with cells producing the S. cerevisiae pheromone and near-perfect discrimination
266 expression of Cryptococcus HXS1 rendered the S. cerevisiae mutant lacking all 20 hexose transporters
268 plication fork directionality throughout the S. cerevisiae genome, which permits the systematic analy
269 y of SANTA in several case studies using the S. cerevisiae genetic interaction network and genome-wid
272 tonin during the fermentation process: three S. cerevisiae strains and the two non-Saccharomyces.
276 Then, using transcriptome data from tolerant S. cerevisiae strain NRRL Y-50049 and a wild-type intole
277 tol phosphate levels in alpha-factor-treated S. cerevisiae, which allows cells to progress synchronou
278 ucose supplemented with galactose, wild-type S. cerevisiae repressed GAL gene expression and had a ro
281 icting synthetic lethality in S. pombe using S. cerevisiae data, then identify over one million putat
282 ation of conditions (cell ratio of H. uvarum/S. cerevisiae; inoculum size and inoculation time of S.
283 translocations and transpositions), whereas S. cerevisiae accumulates unbalanced rearrangements (nov
285 ns (which last shared a common ancestor with S. cerevisiae some 300 million years ago), we show that
288 glabrata cells (the calibration genome) with S. cerevisiae samples (the experimental genomes) prior t
291 ce that the GAL lncRNAs in the budding yeast S. cerevisiae promote transcriptional induction in trans
292 C. parapsilosis and the environmental yeast S. cerevisiae, imaged using 3D multichannel laser scanni
293 s up to 250 kb from complex genomes in yeast S. cerevisiae has been developed more than a decade ago.
294 e major triacylglycerol lipases of the yeast S. cerevisiae identified so far are Tgl3p, Tgl4p, and Tg
296 namely >700 export substrates from the yeast S. cerevisiae, approximately 1000 from Xenopus oocytes a
297 focus on two metabolic enzymes of the yeast S. cerevisiae, neutral trehalase (Nth1) and glycogen pho
299 ncrease upon Puf3 deletion in budding yeast (S. cerevisiae) suggests that the output of the RNA regul
300 restricted than that for two distant yeasts (S. cerevisiae and S. pombe), the only other organisms co
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