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1 SOS (Swedish Obese Subjects) is a prospective matched co
2 SOS accelerated inactivation of meizothrombin 1000-fold,
3 SOS bound HCII with K(D) 1.45 +/- 0.30 mm, and this bind
4 SOS bound to two sites on thrombin, with dissociation co
5 SOS induction following topoisomerase I complex accumula
6 SOS is inactive unless Ras is bound to an allosteric sit
7 SOS' feedback loop leads to hysteresis in the dose-respo
8 SOS-induced levels of DNA polymerase IV (Pol IV) confer
9 SOS-SFC appears possible without any density correction,
10 SOS versus 26.6% of patients with grade 0-1 SOS (P = 0.032).After a median follow-up of 36.9 months,
11 occurred in 16.9% of patients with grade 2-3 SOS versus 26.6% of patients with grade 0-1 SOS (P = 0.0
13 dditionally, wild mango butter comprises 65% SOS (1, 3-distearoyl-2-oleoyl-glycerol) which indicates
15 t pyocin production during the P. aeruginosa SOS response carries both expected and unexpected costs.
18 ds to DNA damage by coordinately inducing an SOS regulon and inhibiting the master regulator CtrA.
23 rity fraction of membrane-recruited Grb2 and SOS both exhibit fast kinetics and single exponential dw
28 A positive feedback loop involving RAS and SOS, which leads to bistability and allows for switch-li
30 vels of guanine exchange factors, RasGRP and SOS, within T cells have been shown to represent a key d
33 with RecA in double-strand-break repair and SOS induction, and RuvABC Holliday-junction resolvase.
35 in the absence of Fis and the other assessed SOS induction as a readout of increased DNA cleavage.
38 s Rad6 and Rad18 comparable to the bacterial SOS response, controlling damage-induced transcriptional
39 l V) are expressed late during the bacterial SOS response, it has long been thought that TLS was the
42 nvestigated the possible interaction between SOS and the cellular deoxynucleoside triphosphate (dNTP)
44 The further addition of a disulfide bond (SOS) to link the gp120 and gp41 subunits in the uncleave
47 ombin generation in plasma was suppressed by SOS, both in HCII-dependent and -independent processes.
48 deleterious transcriptional response called SOS, which is initiated by RecA protein filaments formed
50 ediated DNA damage activates the V. cholerae SOS response, which in turn likely accounts for ParE's i
51 ectivity supercritical fluid chromatography (SOS-SFC) are demonstrated with typical low density mobil
52 optimized selectivity liquid chromatography (SOS-LC) for improved separation of complex mixtures has
57 ss this requirement and display constitutive SOS expression as well as a spontaneous (SOS) mutator ef
64 porter of the global response to DNA damage (SOS) and the TUNEL assay, we show that 3MST-derived H2S
65 100 MPa elicits a RecA-dependent DNA damage (SOS) response in Escherichia coli K-12, despite the fact
70 earliest steps of glial activation, DRK/DOS/SOS function in a partially redundant manner with Crk/Mb
71 ase in urban size could result in an earlier SOS of about 1.3 days and a later EOS of around 2.4 days
72 f cells where the percentage having elevated SOS expression (91%) nearly equals the percentage with a
73 ion-induced bone marrow suppression elicited SOS from a subtoxic dose of Mct, whereas infusion of bon
78 k reversal function of RuvAB is required for SOS induction by the covalent complex formed by topoisom
79 d50 homolog) in recA4142 strains caused full SOS(Con) expression in an ruvAB-, recBCD-, recJ-, and xo
80 9.6%), and 1,3-distearoyl-2-oleoyl-glycerol (SOS) (37.2-31.4%), with SOS being the major component.
81 g patterns of ERK cascade transducers (GRB2, SOS, B-Raf, MEK, and ERK) at the EGR-1 locus resemble bo
83 e examine molecular mobility within LAT:Grb2:SOS assemblies on supported membranes by single-molecule
84 stic timescale, indicating that the LAT:Grb2:SOS assembly has the dynamical structure of a loosely en
85 atible with a model solely depending on HCII.SOS but fit an equilibrium linkage model employing T.SOS
89 esolvable, as evidenced by single hyperbolic SOS concentration dependences of the inactivation rate (
90 y of stress responses previously implicated: SOS/DinB and RpoS, and of sigma(32), which was postulate
91 in this work, recA(Q300R), is proficient in SOS induction and repair of UV-induced DNA damage, but i
94 We propose an additional essential step in SOS/Ras control that is relevant for human cancer as wel
95 cterized the specific activity of individual SOS molecules catalyzing nucleotide exchange in H-Ras.
96 a single-molecule assay in which individual SOS molecules are captured from raw cell lysate using Ra
97 on, DFT-optimized geometries, and B3LYP/INDO-SOS analysis identify three key features underlying the
98 rm filaments with abnormal nucleoids, induce SOS, and fragment their chromosome, revealing replicatio
99 micking RecA filament structures that induce SOS and the suppressor alleles mimic RecA filament at en
100 s hypothesized that RecA's ability to induce SOS expression in log-phase cells is repressed because o
101 review of key features of DNA damage-induced SOS mutagenesis leading us to pol V, and reflects on som
108 enables characterization of the full-length SOS protein, which has not previously been studied in re
111 oved mutant chromosomes due to the mutagenic SOS response and possible recombination of the new allel
112 ecQ, implying that neither recombination nor SOS induction causes hyper-TLD in recB cells, and RecQ i
113 approximately 8-fold higher than the normal SOS-induced levels, failed to impede growth of the dnaN1
116 merase transcription occur in the absence of SOS induction by exogenous agents and indicate that cell
118 We showed previously that the activity of SOS at the membrane increases with the density of PIP(2)
119 nine nucleotide exchange factor) activity of SOS is activated indicates that kinetic stabilization fr
126 ogy (DH)/pleckstrin homology (PH) domains of SOS, bringing GDP-Ras to the proximity of the allosteric
132 ion of membrane-bound Ras by mutant forms of SOS that contain mutations in the histone and the PH dom
133 Z-ring inhibition occurred independently of SOS, SlmA-mediated nucleoid occlusion, and MinCDE protei
136 % of mutant cells to have elevated levels of SOS expression, a percentage similar to that of cells wi
137 epair and contributes to the pathogenesis of SOS, whereas timely infusion of bone marrow has therapeu
140 less (SOS):Ras complex, increase the rate of SOS-catalyzed nucleotide exchange in vitro, and modulate
141 omain limits Grb2-independent recruitment of SOS to the membrane through binding of Ras.GTP in the SO
143 coincides with a productive reorientation of SOS at the membrane and increased accessibility of both
145 Here we present a new crystal structure of SOS that contains the N-terminal histone domain in addit
147 activation of Ras and highlight a pocket on SOS that may be exploited to modulate Ras signaling.
148 unless Ras is bound to an allosteric site on SOS, and the Dbl homology (DH) and Pleckstrin homology (
152 e relative energy difference between the OSS/SOS and OOS/OSO isomers due to their different beta valu
153 (TD) computations, within the sum-overstate (SOS) perturbational approach, expose that the prevailing
158 ctor not only detaches LexA from its primary SOS role, but also fine-tunes gene expression from the M
159 bacter crescentus, cells lacking the primary SOS-regulated inhibitor, sidA, can often still delay div
160 agreement with RasGRP allosterically priming SOS, exponential ERK activation is severely decreased by
162 model suggests that recA(C) alleles promote SOS(C) expression by mimicking RecA filament structures
163 ggest that L. pneumophila lacks a prototypic SOS response and competence development in response to g
166 ied ligands that bound reversibly to the Ras:SOS complex in two distinct sites, but these compounds w
167 stabilizing or covalently modifying the Ras:SOS complex to prevent the reloading of Ras with GTP.
169 anine nucleotide exchange factors (RasGEFs), SOS and RasGRP, activate Ras and the downstream RAF-MEK-
173 cells lacking aPLs fail to initiate a robust SOS response after DNA damage, indicating that the membr
174 ch substitution-oriented fragment screening (SOS) because it focuses on the identification of novel s
175 urban areas starts earlier (start of season, SOS) and ends later (end of season, EOS), resulting in a
178 respectively) and the GEF son of sevenless (SOS) (mammalian homolog, mSOS) are required for efficien
180 tor-bound protein 2 (Grb2):Son of Sevenless (SOS) networks, derived from the T-cell receptor signalin
181 tide exchange factor (GEF) Son of Sevenless (SOS) plays a critical role in signal transduction by act
183 ion of these G proteins is Son of sevenless (SOS), which catalyzes the nucleotide exchange on Ras.
184 f both the Shc adaptor and son of sevenless (SOS)1/2 GEFs, and Rit activation was inhibited by RNA in
185 a unique pocket on the Ras:Son of Sevenless (SOS):Ras complex, increase the rate of SOS-catalyzed nuc
192 cing the relative probability of spontaneous SOS activation in the absence of receptor triggering.
194 ns in combinations with the sum-over-states (SOS) formalism revealed that the enhancement is due to t
198 ND PARTICIPANTS: The Swedish Obese Subjects (SOS) study is an ongoing, nonrandomized, prospective, co
199 e recruited from the Swedish Obese Subjects (SOS) study, which was a matched (nonrandomized) prospect
201 ors are not allele specific and can suppress SOS(C) expression of recA730 and recA4142 in cis and in
203 Grade 2-3 sinusoidal obstruction syndrome (SOS) was present in 124 patients (38.4%), grade 2-3 stea
204 also called sinusoidal obstruction syndrome (SOS), is a potentially life-threatening complication of
206 ) initiates sinusoidal obstruction syndrome (SOS), which is most commonly a consequence of myeloablat
207 catalysis for sustainable organic syntheses (SOS), highlighting key advances and representative examp
208 fit an equilibrium linkage model employing T.SOS binding in the pathway to higher order complex forma
209 mm, and this binding was tightened in the T.SOS.HCII complex, characterized by K(complex) of approxi
210 rther increase in mutagenesis, implying that SOS induction of DinB, although necessary, is insufficie
211 Single-molecule kinetic traces revealed that SOS samples a broad distribution of turnover rates throu
220 oacetic acids, and unregulated DBPs, and the SOS genotoxicity followed the breakthrough of dissolved
224 division inhibition was not mediated by the SOS-induced regulator YneA nor by RecA-independent repre
225 and in vitro approaches to characterize the SOS transcriptional response to DNA damage in the Patesc
227 lation, was ascertained by crosschecking the SOS database with the Swedish National Patient Register
228 transcription factor, DriD, that drives the SOS-independent transcription of didA following DNA dama
231 products, which are up-regulated during the SOS response, were previously shown to bind to the alpha
233 entally define a novel binding motif for the SOS transcriptional repressor LexA, and we use this moti
234 biliary infiltration in 5.6%.The higher the SOS grade the lower the pathological response: TRG 1-2 o
235 During F plasmid conjugation, however, the SOS response is suppressed by PsiB, an F-plasmid-encoded
240 te a predicted role for IsrA and GlmZ in the SOS response, and we expand on current knowledge of the
244 astic process, which temporarily induces the SOS response, and is followed by DNA repair, maintaining
247 ollowing DNA damage in bacteria involves the SOS response where cleavage of the transcriptional repre
248 ytic pathway, measured in a host lacking the SOS response, was almost undetectably low, probably less
249 that described for other inhibitors like the SOS response protein SulA or the moonlighting enzyme Opg
255 ter gene analyses indicated induction of the SOS response for some of the derivatives, suggesting int
259 modification, and we confirm binding of the SOS response transcriptional repressor to sites in the p
260 nal repressor LexA is a key component of the SOS response, the main mechanism for the regulation of D
261 ymerase, one that was induced as part of the SOS response, we actually rediscovered DNA polymerase II
268 derlying mechanism involved a priming of the SOS-dependent amplification loop of RAS activation.
269 lkyldT lesions and revealed the roles of the SOS-induced DNA polymerases in bypassing these lesions i
270 ds to a novel mechanism of inhibition of the SOS-mediated interaction between Ras and Raf and is effe
272 site inhibits Z-ring formation and that the SOS system, SlmA, and MinC are not required for this inh
275 ther stresses, Escherichia coli utilizes the SOS response, which regulates the expression of at least
276 dly evolve resistance to antibiotics via the SOS response, a state of high-activity DNA repair and mu
277 ion tolerance events (i) only occur when the SOS response is fully induced and (ii) are executed in c
280 phase, the expression patterns of all three SOS polymerases change during the transition from log ph
283 only monomeric Grb2 is capable of binding to SOS and upregulating MAP kinase signalling and that the
284 and autoimmune diseases but, in contrast to SOS, its regulatory mechanisms are poorly understood.
291 redictions and experiments exploring whether SOS functions as a RacGEF or adaptor in Rac-p38 activati
293 lone induces analog Ras-ERK activation while SOS and RasGRP cooperate to establish bimodal ERK activa
295 a population where the number of cells with SOS expression more closely equaled the number of RecA f
297 ses show that most residues interacting with SOS also contribute to heparin binding, although in vary
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