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1 sual periplasmic fumarate reductase found in Shewanella.
2 st that this strategy is a common feature of Shewanella.
3 ansporting proteins to the outer membrane in Shewanella.
4 five different electron transfer pathways in Shewanella.
5 exclusively in marine bacteria of the genus Shewanella.
6 rts have examined EET from marine strains of Shewanella.
7 y mixed with one species not in the library (Shewanella alga BrY), is performed by comparison to the
9 alginolyticus B522, a vigorous swarmer, and Shewanella algae B516, which inhibits V. alginolyticus s
10 similatory Fe-reducing bacteria of the genus Shewanella algae grown on a ferrihydrite substrate indic
11 The work with recombinant shewasin A from Shewanella amazonensis provided the first documentation
14 by the dissimilatory iron-reducing bacterium Shewanella and can function as endogenous electron trans
16 imilatory metal-reducing bacteria, including Shewanella and Geobacter species, can reduce a wide rang
18 tified the response for different strains of Shewanella and shown that the response correlates with c
19 ed by genome-wide regulon reconstructions in Shewanella and Streptococcus genera and a large-scale pr
20 studied in model genera such as Escherichia, Shewanella, and Rhodobacter, although TMAO reductases ar
22 ion and temporal dynamics of a collection of Shewanella baltica strains from the redox transition zon
25 ugates induced antibodies that bound to both Shewanella CPS variants by ELISA and to B. anthracis spo
29 AQS), during microbial goethite reduction by Shewanella decolorationis S12, a dissimilatory iron redu
30 udies to shewasin D, the pepsin homolog from Shewanella denitrificans, to gain further insight into t
31 -like protein from the marine proteobactrium Shewanella denitrificans, which exhibits an innate dimer
33 e genes involved in the proposed pathway for Shewanella extracellular electron transfer (EET) are hig
38 ction by the soluble fumarate reductase from Shewanella frigidimarina involves hydride transfer from
39 n-induced flavocytochrome c(3), Ifc(3), from Shewanella frigidimarina NCIMB400, derivatized with a 2-
40 cture of the soluble fumarate reductase from Shewanella frigidimarina shows the presence of four, bis
42 n applied a new comparative approach on five Shewanella genomes that allowed us to systematically ide
45 Fe(III)-reducing microorganisms in the genus Shewanella have resolved this problem by releasing solub
48 hat extracellular respiration of minerals by Shewanella is more complex than originally conceived.
52 ith which they have the greatest similarity: Shewanella-like (SLP), Rhizobiales-like (RLPH), and ApaH
53 rate that Arabidopsis (Arabidopsis thaliana) Shewanella-like protein phosphatase 2 (AtSLP2) is a bona
54 compared to the homologous Npsr enzyme from Shewanella loihica PV-4 and homologous enzymes known to
55 capsulatus dimethyl sulfoxide reductase, and Shewanella massilia trimethylamine N-oxide reductase as
56 ive studies involving EET from a fresh water Shewanella microbe (S. oneidensis MR-1) to soluble and i
58 te that the molecular constituents along the Shewanella nanowires possess an intricate electronic str
59 orces that characterize interactions between Shewanella oneidensis (a dissimilatory metal-reducing ba
60 found in the unannotated genome sequence of Shewanella oneidensis (formerly S. putrefaciens) MR-1.
61 he ferrous-oxy complexes of human (hIDO) and Shewanella oneidensis (sIDO) indoleamine 2,3-dioxygenase
62 act of dimerization upon the activity of the Shewanella oneidensis (So) bCcP by the preparation of si
65 uter-membrane deca-heme cytochrome MtrC from Shewanella oneidensis and flavin mononucleotide (FMN in
66 In PIPES buffer at pH 7 with excess H(2), Shewanella oneidensis and Geobacter sulfurreducens both
67 e availability of whole genome sequences for Shewanella oneidensis and Geobacter sulfurreducens has p
70 the acnD and prpF genes from two organisms, Shewanella oneidensis and Vibrio cholerae, and found tha
71 ergy in DNA-protein interactions between the Shewanella oneidensis ArcA two-component transcription f
72 urface power density of 89.4 muW/cm(2) using Shewanella oneidensis as a model biocatalyst without any
73 we applied QENS to study water transport in Shewanella oneidensis at ambient (0.1 MPa) and high (200
75 genomic expression patterns were examined in Shewanella oneidensis cells exposed to elevated sodium c
76 f energy by Fe(III)-reducing species such as Shewanella oneidensis could potentially control the redo
78 we show that an H-NOX protein (SO2144) from Shewanella oneidensis directly interacts with the sensor
79 the effect of an insertional mutation in the Shewanella oneidensis etrA (electron transport regulator
81 ics of the respiratorily versatile bacterium Shewanella oneidensis grown under aerobic, lactate-limit
82 crystal structures of the H-NOX protein from Shewanella oneidensis in the unligated, intermediate six
83 Fe(II)-NO complex of the H-NOX protein from Shewanella oneidensis inhibits the autophosphorylation o
85 ulation of sigma(S) in the aquatic bacterium Shewanella oneidensis involves the CrsR-CrsA partner-swi
92 of the Fe(III)-reducing facultative anaerobe Shewanella oneidensis manipulated under controlled labor
94 fied a conserved chromosomal gene cluster in Shewanella oneidensis MR-1 (locus tag: SO_1522-SO_1518)
95 nt chromium (Cr(VI)) were investigated using Shewanella oneidensis MR-1 (MR-1) as a biocatalyst and p
96 ional analysis of the cold shock response of Shewanella oneidensis MR-1 after a temperature downshift
97 PCR primers specific to individual ORFs from Shewanella oneidensis MR-1 and Deinococcus radiodurans R
98 physical barrier, the Gram-negative bacteria Shewanella oneidensis MR-1 and Geobacter sulfurreducens
99 AuNP samples was evaluated for the bacterium Shewanella oneidensis MR-1 and is quantitatively correla
100 mical techniques to probe intact biofilms of Shewanella oneidensis MR-1 and Shewanella sp. MR-4 grown
101 mutagenesis in the metal-reducing bacterium Shewanella oneidensis MR-1 and the pathogenic yeast Cand
102 the presence of the iron reducing bacterium Shewanella oneidensis MR-1 are investigated under contro
103 metabolic responses of metabolically active Shewanella oneidensis MR-1 biofilms to U(VI) (uranyl, UO
105 ed that detachment of cells from biofilms of Shewanella oneidensis MR-1 can be induced by arresting t
106 In this paper, population-level taxis of Shewanella oneidensis MR-1 cells in the presence of a ra
107 enous method to increase power output from a Shewanella oneidensis MR-1 containing MFC by adding calc
108 kout collection of the electroactive microbe Shewanella oneidensis MR-1 containing representatives fo
112 echniques to investigate binding between the Shewanella oneidensis MR-1 extracellular electron transf
114 lability of the complete genome sequence for Shewanella oneidensis MR-1 has permitted a comprehensive
115 The tetraheme c-type cytochrome, CymA, from Shewanella oneidensis MR-1 has previously been shown to
117 lectron transport chain of the DIR bacterium Shewanella oneidensis MR-1 in Escherichia coli, we showe
118 ure of the small tetraheme cytochrome c from Shewanella oneidensis MR-1 in two crystal forms and two
119 the extracellular electron transfer chain of Shewanella oneidensis MR-1 into the model microbe Escher
123 (IR) dose that yields 20% survival (D20) of Shewanella oneidensis MR-1 is lower by factors of 20 and
125 t the dissimilatory metal-reducing bacterium Shewanella oneidensis MR-1 lacks chemotactic responses t
129 determined that graphene oxide reduction by Shewanella oneidensis MR-1 requires the Mtr respiratory
131 whole-genome analyses of DNA methylation in Shewanella oneidensis MR-1 to examine its possible role
133 iron) and the common metal-reducing microbe Shewanella oneidensis MR-1 under several endmember condi
134 t use FNR to regulate anaerobic respiration, Shewanella oneidensis MR-1 uses the cyclic AMP receptor
135 nder anaerobic or oxygen-limited conditions, Shewanella oneidensis MR-1 uses the serine-isocitrate ly
137 s extracted from the periplasmic fraction of Shewanella oneidensis MR-1 were further identified using
138 the toxicity of AgNPs to a bacterial model (Shewanella oneidensis MR-1) decreases most significantly
141 trometry (MS/MS) to annotate the proteome of Shewanella oneidensis MR-1, an important microbe for bio
142 his study, we used a model organism in MFCs, Shewanella oneidensis MR-1, and (13)C pathway analysis t
143 echnique, we investigated single colonies of Shewanella oneidensis MR-1, Bacillus subtilis 3610, and
144 networks in the dissimilatory metal reducer Shewanella oneidensis MR-1, global mRNA patterns were ex
145 507, originally annotated as hypothetical in Shewanella oneidensis MR-1, were suggested to encode nov
146 vestigate extracellular electron transfer in Shewanella oneidensis MR-1, where an array of nanoholes
147 the dissimilatory metal-reducing bacterium, Shewanella oneidensis MR-1, whose electron transport sys
159 alyze the metabolite composition of streaked Shewanella oneidensis MR1 and Pseudomonas stutzeri RCH2
161 t Crp and Fnr sites, and expression from the Shewanella oneidensis nrfA control region cloned in E. c
162 nipulating the lipopolysaccharide content in Shewanella oneidensis outer membranes, we observed the e
163 tion of this method to the identification of Shewanella oneidensis peptides/proteins exhibiting diffe
164 fferent tryptic peptides from >2000 distinct Shewanella oneidensis proteins ( approximately 40% of th
165 0 unique peptides that covered 1443 distinct Shewanella oneidensis proteins from a 300-ng tryptic dig
166 When applied to a global tryptic digest of Shewanella oneidensis proteins, an order-of-magnitude in
167 platform is demonstrated for the analysis of Shewanella oneidensis proteome, which has considerable i
168 tching system of the aquatic Proteobacterium Shewanella oneidensis regulates post-translationally sig
169 we provide genetic evidence that AQDS enters Shewanella oneidensis strain MR-1 and causes cell death
170 , we measured the rate of U(VI) reduction by Shewanella oneidensis strain MR-1 as function of NaHCO3
172 FF (Fl FFF) methodology to separate cells of Shewanella oneidensis strain MR-1 from exopolymers prese
178 of hydrogenotrophic iron-reducing bacteria (Shewanella oneidensis strain MR-1) on the corrosion rate
180 he non-arsenate-respiring Shewanella species Shewanella oneidensis strain MR-1, has pleiotropic effec
181 Compared to a previous whole-cell study with Shewanella oneidensis strain MR-1, our findings suggest
185 rved physiological and metabolic activity of Shewanella oneidensis strain MR1 and Escherichia coli st
186 by fibers derived from a distant homolog in Shewanella oneidensis that shares less than 30% identity
188 a tagged alpha-subunit of RNA polymerase in Shewanella oneidensis under controlled growth conditions
189 nent of the metal reduction (Mtr) pathway of Shewanella oneidensis under the control of an arsenic-se
191 The crystal structure of SO1698 protein from Shewanella oneidensis was determined by a SAD method and
192 ransformation experiments in the presence of Shewanella oneidensis were modeled with this exercise re
193 resolution structure of a YiiP homolog from Shewanella oneidensis within a lipid bilayer in the abse
195 species-specific function, were monitored in Shewanella oneidensis, a metal reducing bacterium, follo
196 e cloned and expressed the MsrBA enzyme from Shewanella oneidensis, a metal-reducing bacterium and fi
197 enomic analysis of the cis-regulatory map of Shewanella oneidensis, an important model organism for b
198 a global proteome extract from the bacteria Shewanella oneidensis, and mouse plasma, as well as (18)
199 -host-range plasmid was poorly maintained in Shewanella oneidensis, but rapidly adapted through mutat
200 hanococcus jannaschii, Pyro coccus furiosus, Shewanella oneidensis, Escherichia coli and Deinococcus
203 estris TDO and a related protein SO4414 from Shewanella oneidensis, including the structure at 1.6-A
204 rrays constructed with full length ORFs from Shewanella oneidensis, MR-1, were hybridized with genomi
205 ntly supports 10 organisms (Vibrio cholerae, Shewanella oneidensis, Saccharomyces cerevisiae, Schizos
206 g three independently derived AMT databases (Shewanella oneidensis, Salmonella typhimurium, Yersinia
207 s, including those from Nostoc sp. PCC 7120, Shewanella oneidensis, Shewanella woodyi, and Clostridiu
208 ke in the nonmethylating facultative aerobe, Shewanella oneidensis, under both anaerobic and aerobic
209 ranscriptomic studies to characterize Fur in Shewanella oneidensis, with regard to its roles in iron
220 ophile Escherichia coli and the extremophile Shewanella piezotolerans both expanded their growth rang
222 Isolates belonged to five genera, including Shewanella, Pseudomonas, Psychromonas (Gammaproteobacter
226 e(2.74)(SO(4))(2)(OH)(5.22)(H(2)O)(0.78), by Shewanella putrefaciens CN32 using batch experiments und
227 ocrocite was rapidly reduced to magnetite by Shewanella putrefaciens CN32, and over time the magnetit
238 K, Geobacter sulfurreducens strain PCA, and Shewanella putrefaciens strain CN-32, and compared it to
241 plore this process, we identified mutants in Shewanella putrefaciens that are unable to respire on hu
242 arosite (PbFe(3)(SO(4),AsO(4))(2)(OH)(6)) by Shewanella putrefaciens using batch experiments under an
243 avior of the monopolarly flagellated species Shewanella putrefaciens with fluorescently labeled flage
246 g poorly, in contrast to hybridizations with Shewanella putrefaciens, formerly considered to be the s
247 ii, Legionella pneumophila, Vibrio cholerae, Shewanella putrefaciens, Sinorhizobium meliloti, and Cau
248 ycoplasma genitalium, Mycoplasma pneumoniae, Shewanella putrefaciens, Synechocystis sp., Deinococcus
249 mes of several Shewanella species, including Shewanella putrefaciens, which is hypothesized to direct
254 To obtain a system-level understanding of Shewanella's robustness and versatility, the complex int
257 rite (molar As/Fe: 0.05; Fe tot: 32.1 mM) by Shewanella sp. ANA-3 (10(8) cells/mL) in the presence of
258 and the GalN-6-phosphate deaminase AgaS from Shewanella sp. ANA-3 were validated in vitro using indiv
259 an algicidal exudate (IRI-160AA) produced by Shewanella sp. IRI-160 that is effective against dinofla
260 t biofilms of Shewanella oneidensis MR-1 and Shewanella sp. MR-4 grown by using a poised electrode as
261 and detoxifying (ars) reduction pathways in Shewanella sp. strain ANA-3 are induced by arsenite and
262 acterized the expression and activity of the Shewanella sp. strain ANA-3 arsenate respiratory reducta
264 nate respiratory reduction) in the bacterium Shewanella sp. strain ANA-3 specifically confers respira
270 ypic characterization of an ackA deletion in Shewanella sp. strain MR-4 and genomic analysis of other
271 is evident from Fe-reducibility assays using Shewanella sp., however was undetectable by chemical ext
278 ochrome, which in the non-arsenate-respiring Shewanella species Shewanella oneidensis strain MR-1, ha
280 cluster in the sequenced genomes of several Shewanella species, including Shewanella putrefaciens, w
285 oducing isolates, Sulfitobacter spp. 376 and Shewanella spp. 79, were transformed with plasmids expre
286 he napD and nrfA operon control regions from Shewanella spp. also have apparent Crp and Fnr sites, an
288 the AHLs produced by Sulfitobacter spp. and Shewanella spp. or the bacterial products they regulate
289 s the range of carbon substrates utilized by Shewanella spp., unambiguously identifies several genes
291 physiological studies of 10 closely related Shewanella strains and species to provide quantitative i
292 Consistent with genomic data, all tested Shewanella strains except S. frigidimarina, which lacked
294 porting extracellular mineral respiration in Shewanella that may extend into other genera of Gram-neg
295 mediated energy taxis, is proposed by which Shewanella use riboflavin as both an electron shuttle an
296 egrees C demonstrated that all genera except Shewanella were psychrophiles with optimal growth below
299 Nostoc sp. PCC 7120, Shewanella oneidensis, Shewanella woodyi, and Clostridium botulinum, indicating
300 diguanylate cyclase functional partners from Shewanella woodyi, we demonstrate that mutation of the c
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