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1 TAF accumulated inside genital epithelial cells as TFV-D
2 TAF has the potential advantages that dose adjustment is
3 TAF is formulated to deliver the active metabolite to ta
4 TAF(I)41 immunodepletion from nuclear extracts dramatica
5 TAF(I)41 resides at the rDNA promoter in the nucleolus a
6 TAF(II)105-null B cells can proliferate in response to L
7 TAF(II)250, the largest subunit of the general transcrip
8 TAF-1 is not as universally required as TAF-4, but it is
9 TAF-2, which binds core promoters with TAF-1, appears to
10 TAF-5 (human (h) TAF(II)100) is of particular interest b
11 TAF-dependent (TAF(dep)) promoters require TAFs for tran
12 TAF-I associates with chromatin in vitro and can substit
13 TAFs have also been recently found to enhance antisense
16 entially all embryonic transcription, TAF-5, TAF-9, and TAF-10 were dispensable at multiple developme
18 l cases the transcriptional dependence for a TAF can be explained by a requirement for TBP recruitmen
21 eaf1 strain depletes recruitment of TFIID (a TAF-dependent form of TBP) but not the TAF-independent f
24 revention trials, and Tenofovir alafenamide (TAF), an improved prodrug of TFV, interfere with wound h
25 tins on tenofovir (TFV) and TFV-alafenamide (TAF) on HIV infection and intracellular TFV-diphosphate
28 s TAF homologs collaborate in an alternative TAF-containing protein complex to regulate a testis-spec
29 one fold TAF(II)s, TAF-9 (hTAF(II)31/32) and TAF-10 (hTAF(II)30), but is distinct from the widespread
32 l embryonic transcription, TAF-5, TAF-9, and TAF-10 were dispensable at multiple developmental and ot
33 ced division of labor between activators and TAF coactivators, thus providing another strategy to acc
36 lusion that an interaction between hsTBP and TAF(II)s is required for activated transcription in mamm
37 minated genes are largely stress induced and TAF independent, and are downregulated by the coordinate
39 h subunit, and the constellation of TBP- and TAF-associated proteins was directly identified by coupl
40 ate that MPA selectively compromises TFV and TAF protection in blood and genital CD4+ T cells and sug
42 require TAFs for transcription, and TBP and TAFs are present at comparable levels on these promoters
43 The latter's TATA-binding protein (TBP) and TAFs photocross-link to the promoter from -78 to +10 rel
46 lation targets, including SET (also known as TAF-I or PHAPII) and the retinoblastoma protein, RB.
60 binding to and sequestering in the cytoplasm TAF-4, a component critical for assembly of TFIID and th
61 o the efficacy of Wnt16 knockdown in damaged TAFs as a promising combinatory strategy to improve effi
62 suggested that while off-targeted NP damaged TAFs and inhibited tumor growth after an initial dose, c
63 d at investigating the effects of NP damaged TAFs on neighboring cells and alteration of stromal stru
64 nal role of TAFs, it is imperative to define TAF-TAF interactions and their topological arrangement w
66 omposition of hESC TAFs, either by depleting TAFs that are present or ectopically expressing TAFs tha
67 displays significant homology to Drosophila TAF(II)110, whereas the other is a predicted zinc bindin
71 onclude that during C. elegans embryogenesis TAF-1 and TFIID have broad roles in transcription and de
72 e ts13 is mutated in CCG1, the gene encoding TAF(II)250, the largest of the TATA-binding protein-asso
73 c two-hybrid analysis using the 13 essential TAFs of the Saccharomyces cerevisiae TFIID complex and T
75 s that are present or ectopically expressing TAFs that are absent, results in misregulated expression
79 ly related to the basal transcription factor TAF(II)250, which is essential for cyclin A transactivat
80 stration of the general transcription factor TAF-4 and is regulated by mechanisms that orchestrate th
82 is a TATA-binding protein associated factor (TAF) conserved from yeast to humans and shared by two tr
83 1, a TATA-binding protein Associated Factor (TAF) of the RNA polymerase II transcription initiation f
84 ro transcription, the TBP-associated factor (TAF) subunits recognize downstream promoter elements, ac
88 TATA box-binding protein-associated factor (TAF)1 from Drosophila cells and determined the consequen
89 es, TATA-binding protein-associated factors (TAF(II)s) are important for eukaryotic mRNA transcriptio
90 tions with five TATA box-associated factors (TAF(II)s) were mapped, and mutations that disrupt the in
92 TATA-binding protein and associated factors (TAF(II)s), some of which are also present in SPT-ADA-GCN
94 ng protein (TBP) and TBP-associated factors (TAFs) and is the only component of the general RNA polym
95 rotein (TBP) and the TBP-associated factors (TAFs) are assembled into a functional TFIID complex with
96 TA-binding protein (TBP)-associated factors (TAFs) as well as the multi-subunit cofactors ARC/CRSP.
99 (TFs) and transcription associated factors (TAFs) representing about 5% of the total annotated seque
100 TA-binding protein (TBP)-associated factors (TAFs) that constitute transcription factor II D (TFIID)
101 TA-binding protein (TBP)-associated factors (TAFs) within the TFIID complex and counteracts negative
102 protein (TBP) and 14 TBP-associated factors (TAFs), can directly recognize core promoter elements and
103 ox-binding protein (TBP)-associated factors (TAFs), evolutionarily conserved from yeast to humans, pl
104 , an assembly of TBP and associated factors (TAFs), is essential for preinitiation complex formation
105 protein (TBP) and 13 TBP-associated factors (TAFs)-assembles into a functional transcription factor i
106 ng protein (TBP) and TBP-associated factors (TAFs)-is a central component of the Pol II promoter reco
117 a complex of TBP and TBP-associated factors [TAFs])-dependent ribosomal protein genes involved in rib
118 laxin increased tumor-associated fibroblast (TAF) interaction with collagen fibers by stimulating bet
119 subset of the tumor-associated fibroblasts (TAF) was found to express B7H1 (PD-L1) and B7DC (PD-L2)
123 ilarly depleting two C. elegans histone fold TAF(II)s, TAF-9 (hTAF(II)31/32) and TAF-10 (hTAF(II)30),
124 more society ought to be willing to pay for TAF over TDF, in exchange for its improved toxicity prof
125 ssible, however, the appropriate premium for TAF will likely merit a downward adjustment, using gener
127 -specific TAF4b component of TFIID (formerly TAF(II)105) is a transcriptional regulator enriched in t
130 or up to 19 weeks and received saline or FTC/TAF 24 hours before and 2 hours after each virus inocula
133 ranscription of the ribosomal protein genes, TAF-dependent antisense transcription of GAL10 also requ
141 The interaction between human TBP and human TAF(I)48 was initially examined using the yeast two-hybr
144 units, Set/template-activating factor-Ibeta (TAF-Ibeta) and pp32, specifically bind to unacetylated,
148 lyses suggest that, although some individual TAF(II)s are required for transcription of most genes, o
149 firm and extend the proposal that individual TAFs have selective transcriptional roles and distinct f
150 binding protein-associated factor, 250 kDa (TAF(II)250) and the Drosophila developmental protein fem
151 metry confirms the presence of all the known TAFs and TBP, as well as Rsp5, Bul1, Ubp3, Bre5, Cka1, a
152 plex containing TBP:TFIIA:TFIIB, which lacks TAFs, and provides a mechanism that could function at TA
155 TRAP/Mediator and TFIID (TBP plus the major TAF(II)s) required addition of both TBP and associated T
158 cubation of p53 mutants with Mdm-2 modulated TAF(II)31 interaction with p53, suggesting Mdm-2 blocks
160 Although higher eukaryotes contain multiple TAF variants that specify tissue- and developmental stag
161 SpRrn7h/murine TAF(I)68, and SpRrn11h/murine TAF(I)48, multiple ones were identified across eukaryote
162 arch for putative homologs of SpRrn7h/murine TAF(I)68, and SpRrn11h/murine TAF(I)48, multiple ones we
164 dent, and we provide evidence that SAGA, not TAF(II)s within TFIID, are largely responsible for TBP r
169 We investigated whether the combination of TAF and emtricitabine (FTC) could prevent simian/human i
170 ells, siRNA-mediated decreased expression of TAF(I)41 leads to loss of SL1 from the rDNA promoter in
172 n together, we conclude that the function of TAF(II)105 in B cells is likely redundant with the funct
173 esults suggest that the specific function of TAF(II)s is to direct the chromatin remodeling step thro
174 Much less is known about the functions of TAF(II)s in metazoans, which have more complex genomes t
178 also provide evidence for specific roles of TAF HFMs, highlighting the functional significance of HF
180 n macaques to determine the potential use of TAF for pre-exposure prophylaxis (PrEP) to prevent human
182 this study, we describe a novel function of TAFs in directing genomic occupancy of a transcriptional
184 tudies demonstrating the essential nature of TAFs in transcription, very little is known about the su
187 Emerging consensus regarding the role of TAFs is that TFIID assumes a gene specific activity that
188 To understand fully the functional role of TAFs, it is imperative to define TAF-TAF interactions an
190 Thus, the selective expression and use of TAFs underlies the ability of hESCs to self-renew.DOI:ht
194 pattern: most active genes are bound by only TAFs 3 and 5 along with TBP, whereas the remaining activ
195 n with P300/CBP-associated factor (P/CAF) or TAF(II)250 bromodomains or the P/CAF or GCN5 HAT domains
196 incubation of blood CD4+ T cells with TFV or TAF, Medroxyprogesterone acetate (MPA), but not Levonorg
197 oter recognition factor (Trf2) and an orphan TAF subunit (Taf7l) in mammalian testis-specific gene tr
200 nd c-Jun) and regulatory protein (CBP, p300, TAF(II)250, and polymerase II) binding at both the upstr
208 ervation that TAF1L can functionally replace TAF(II)250 provides experimental support for the hypothe
209 TAF-dependent (TAF(dep)) promoters require TAFs for transcription, and TBP and TAFs are present at
210 urthermore, the recruitment of Rap1 requires TAF(II)s, suggesting a role for TFIID in stabilizing act
211 he high concentration of estrogen-responsive TAF in MED12-LM explains the inconsistent discoveries be
212 ate increased 1,25-(OH)(2)D(3) responsivity, TAF(II)-17 expression, or nuclear number per osteoclast.
213 leting two C. elegans histone fold TAF(II)s, TAF-9 (hTAF(II)31/32) and TAF-10 (hTAF(II)30), but is di
218 study reveals that the histone chaperone SET/TAF-Ibeta interacts with cytochrome c following DNA dama
220 nucleosome assembly protein 1 and human SET/TAF-1beta/INHAT histone chaperones, Vps75 shows several
221 vivo mechanistic role for the mammalian Set/TAF-Ibeta and pp32 proteins as transducers of chromatin
222 found to competitively hinder binding of SET/TAF-Ibeta to core histones, thereby locking its histone-
224 sis of cytochrome c-mediated blocking of SET/TAF-Ibeta, which subsequently may facilitate the develop
225 r of acetyltransferases), containing the Set/TAF-Ibeta oncoprotein and pp32 strongly inhibits the HAT
226 try of TFIID subunits indicated that several TAFs are present at more than 1 copy per TFIID complex.
227 mbryonic stem cells (hESCs) contain only six TAFs (TAFs 2, 3, 5, 6, 7 and 11), whereas following diff
228 ovide evidence for a novel component of SL1, TAF(I)41 (MGC5306), which functions in Pol I transcripti
230 ultiple studies indicate that TFIID-specific TAF(II)s are not required for the transcription of most
232 iple TBP-related factors and tissue-specific TAF(II)s suggests the existence of specialized TFIID com
233 also express four additional tissue-specific TAFs: nht (homolog of dTAF4), mia (homolog of dTAF6), sa
234 and the available studies utilizing specific TAFs, we propose a working hypothesis for the arrangemen
236 taxin-7 protein, a member of the STAGA [SPT3-TAF(II)31-GCN5L acetylase] and TFTC (GCN5 and TRRAP) chr
237 clear extracts, transcription induces stable TAF binding to downstream promoter DNA, promoting subseq
238 pe-selective expression of the TFIID subunit TAF(II)105 (renamed TAF4b) in the ovary is essential for
239 t, with genital CD4+ T cells, MPA suppressed TAF inhibition of HIV infection and lowered of TFV-DP co
242 feron mediator CIITA is independent of TAF1 (TAF(II)250) and focuses initiation on the downstream sta
243 stream start sites and is dependent on TAF1 (TAF(II)250), a finding consistent with its role in regul
244 se mutation in the transcription factor TAF1/TAF(II)250 induces the mutant ts13 cells to arrest in la
245 -cross-linking results demonstrate that TAF1/TAF(II)250 interacts with the DCE subelement DNA in a se
246 ic stem cells (hESCs) contain only six TAFs (TAFs 2, 3, 5, 6, 7 and 11), whereas following differenti
247 effect of Combo NP works by first targeting TAFs and is more effective as an anti-tumor therapy than
249 orts the idea that TBP and, most likely, TBP-TAF complexes, remain promoter- bound for multiple round
250 novel model in which the association of TBP-TAF complexes with chromatin during mitosis marks genes
251 of the five Drosophila genes encoding testis TAF homologs collaborate in an alternative TAF-containin
253 tin immunoprecipitation revealed that testis TAFs bind to target promoters, reduce Polycomb binding,
254 r a greater proportion of transcription than TAF-5, -9, or -10 and is important for transcription of
256 es after 48 weeks of therapy have shown that TAF may be a good alternative to TDF for treating chroni
265 stics provide multiple opportunities for the TAF to influence cellular interactions within the tumor
267 SL1 and imply a role for SL1, including the TAF(I)41 subunit, in Pol I recruitment and, therefore, p
268 ID (a TAF-dependent form of TBP) but not the TAF-independent form of TBP to the promoters of ribosoma
272 tyltransferase) is involved in targeting the TAF-independent form of TBP to the promoters of ribosoma
274 ts expression is strictly dependent upon the TAF(II) subunits of TFIID, which are required for the re
275 domain (activation domain 3 [AD3]) with the TAF homology (TAFH) domain of TAF4, (2) is critical for
276 er enhances the interaction of CREB with the TAF(II)130 component of TFIID following its recruitment
277 etry, we define the interactions between the TAFs and uncover a central role for TAF8 in nucleating t
280 of DNA and supports basal transcription, the TAFs have essential functions that remain poorly defined
281 es undergo a slow isomerization in which the TAFs reorganize their contacts with the promoter to allo
285 al human gene, TAF1L, which is homologous to TAF(II)250 and is expressed specifically in the testis,
287 2 facilitates the binding of OMA proteins to TAF-4 and simultaneously inactivates their function in r
291 for essentially all embryonic transcription, TAF-5, TAF-9, and TAF-10 were dispensable at multiple de
294 less regulated, but is highly dependent upon TAFs, including those shared between TFIID and SAGA.
295 trong evidence for the proposal that in vivo TAFs are the targets of some, but not all, activators.
297 acetylated lysine 12 on histone H4, whereas TAF(II)250 and PCAF recognized H3 and other acetylated h
299 nt transcription of chromatin assembled with TAF-I still requires the presence of TAF-I during the po
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