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   1                                              TALEN treatment efficiently disrupted E6 and E7 oncogene
     2                                              TALEN were shown to induce mutations in the target codin
     3                                              TALEN-Agouti mRNAs injected into zygotes of brown FvB x 
     4                                              TALEN-mediated gene editing is a useful tool for dissect
     5                                              TALEN-mediated gene targeting in avian PGCs is therefore
     6                                              TALEN-modified CMV-specific T cells retained specific ki
     7                                              TALEN-modified Ossabaw swine fetal fibroblasts were effe
     8                                              TALENs are important new tools for genome engineering.  
     9                                              TALENs targeting beta-catenin promoted endogenous HCC ca
    10                                              TALENs thus appear to represent a highly facile platform
  
    12 ew design guidelines for TALENs based on 205 TALENs tested, and established the scoring algorithm for
  
    14 o combined both technologies and developed a TALEN-HDAdV hybrid vector, which significantly increased
    15     Based on these findings, we engineered a TALEN variant that exhibits equal on-target cleavage act
  
  
    18 n, and we engineered a pair of highly active TALENs that induce modification of 54% of human beta-glo
  
  
    21 ocyte polyploidy might be protective against TALEN-induced loss of heterozygosity, and indeed Apc gen
  
  
  
    25 mia (AML) cell lines, and present CRISPR and TALEN based methods for accomplishing complete gene knoc
  
  
  
  
  
    31 sly been proposed to predict optimal ZFN and TALEN target sites did not predict mutagenicity in vivo.
  
  
  
  
    36 ty in mammalian cells of custom TALE-TFs and TALENs using quantitative reverse-transcription PCR and 
    37 nd rapid construction of custom TALE-TFs and TALENs within 1 week and can be easily scaled up to cons
  
    39 hlight the therapeutic potential of ZFNs and TALENs and discuss future prospects for the field, inclu
  
  
  
    43 characterize these cell lines, we anticipate TALEN-mediated genome editing of human cells becoming a 
    44 e efficiency, we administered adenoviral Apc TALENs and found that we could achieve a higher mutagene
    45 A rate-limiting step in efficiently applying TALEN and CRISPR/Cas9 methods is the selection and desig
    46 nome editing with designer nucleases such as TALEN and CRISPR/Cas enzymes has broad applications.    
  
  
  
  
  
    52 d a significant negative correlation between TALEN mutagenicity and the number of CpG repeats in TALE
  
    54  we demonstrate for the first time that both TALEN and ZFN injected directly into pig zygotes can pro
  
  
    57  describe a mutant zebrafish line created by TALEN genome editing carrying a 23 bp deletion in gba1 (
    58 re targeted to "spacer" sequences flanked by TALEN binding sites, larger deletions that extended beyo
    59 onstructed an EYS-knockout zebrafish-line by TALEN technology which showed visual impairment at an ea
    60 d a stable CERKL knockout zebrafish model by TALEN technology and a 7bp deletion in CERKL cDNA that c
    61 C) technology and genome editing mediated by TALENs to generate isogenic subject-specific mutant and 
  
    63    The key features of direct mutagenesis by TALENs and oligodeoxynucleotides, minimal effort and hig
    64 g the length of recognition DNA sequences by TALENs or ZFNs does not necessarily translate to a highe
  
    66 cific germline mutation in the mouse confirm TALEN mediated mutagenesis in the oocyte to be a viable 
    67 able high-throughput method for constructing TALENs has been published, and large-scale assessments o
    68 off-target cleavage activity and corroborate TALENs as a highly specific platform for future clinical
    69 r of using transcriptome analysis and CRISPR/TALEN-based KOs to identify and verify genes associated 
  
    71 bly' method for rapid production of designer TALENs (dTALENs) that recognize unique DNA sequence up t
  
  
  
    75 in immunoprecipitation (ChIP), gene editing (TALEN) and chromosome conformation capture (3C) to local
  
  
    78 ly package full-length vector mRNAs encoding TALENs, but recombination during reverse transcription p
  
    80  delivery system, we show that this enhanced TALEN toolkit has a high efficiency in inducing locus-sp
    81 a simple transposon coselection strategy for TALEN-mediated gene modification in primary fibroblasts 
    82 enous gene-modification frequency of 39% for TALENs containing the repeat variable di-residue NK that
    83 ines and developed new design guidelines for TALENs based on 205 TALENs tested, and established the s
  
    85 orm is fully compatible with the Golden Gate TALEN and TAL Effector Kit 2.0, a widely used and effici
    86 that the correction process did not generate TALEN-induced off targeting mutations by sequencing.    
  
  
    89 hat construction of one to two heterodimeric TALEN pairs for any given gene will, in most cases, enab
    90 nduced by both homodimeric and heterodimeric TALENs are passed efficiently through the germline, in s
  
  
  
  
  
    96 LE-R activity and up to 10-fold reduction in TALEN activity compared with target sequences containing
  
    98 utagenicity and the number of CpG repeats in TALEN target sites, suggesting that target site methylat
  
   100 ed that mutations in the FokI domain used in TALENs to generate obligate heterodimeric complexes subs
  
  
   103  designs increased the average intracellular TALEN monomer activity by >3-fold, and resulted in an av
   104 ely target almost any desired genomic locus, TALEN is a technology that can revolutionize the entire 
   105 nd DNA relatively independently; (ii) longer TALENs are more tolerant of mismatches yet are more spec
   106 lity to target essentially any sequence make TALENs the superior technology for targeted mutagenesis 
   107    In parallel experiments, we employed mito-TALENs to induce breaks in distinct loci of the mitochon
  
   109 s, genotypes, gene expressions, morpholinos, TALENs, CRISPRs, antibodies, anatomical structures, mode
  
  
  
   113 nscription activator-like effector nuclease (TALEN) and clustered regularly interspaced short palindr
   114 nscription activator-like effector nuclease (TALEN) and zinc finger nuclease (ZFN) can be engineered 
   115 nscription activator-like effector nuclease (TALEN) and zinc finger nuclease (ZFN) genome editing tec
   116 nscription activator-like effector nuclease (TALEN) binding sites in the genome using a new software 
   117 nscription Activator-Like Effector Nuclease (TALEN) exhibited few off-target effects and a low level 
   118 nscription activator-like effector nuclease (TALEN) is an artificial sequence-specific endonuclease t
  
   120 nscription activator-like effector nuclease (TALEN) mRNA allows highly efficient multiplex gene editi
   121 nscription activator-like effector nuclease (TALEN) nuclease to knockdown endogenous Dot1L in Xenopus
   122 nscription activator-like effector nuclease (TALEN) technologies are powerful strategies for the gene
   123 nscription activator-like effector nuclease (TALEN) technology to only disrupt the expression of Jalp
   124 tion activator-like (TAL) effector nuclease (TALEN)- and clustered regularly interspaced short palind
   125 nscription activator-like effector nuclease (TALEN)-based universal correction of HBB mutations in si
   126 nscription activator-like effector nuclease (TALEN)-mediated gene editing in mouse embryonic stem cel
   127 nscription activator-like effector nuclease (TALEN)-mediated genome editing, we created a panel of is
  
  
  
   131 scription activator-like effector nucleases (TALEN) mRNAs into mouse zygotes transferred into foster 
   132 scription activator-like effector nucleases (TALEN) were designed against beta-catenin (Ctnnb1) and a
  
  
   135 scription activator-like effector nucleases (TALENs) ameliorates the R14del-associated disease phenot
   136 scription activator-like effector nucleases (TALENs) and clustered regularly interspaced short palind
   137 ion activator-like (TAL) effector nucleases (TALENs) and clustered regularly interspaced short palind
   138 scription activator-like effector nucleases (TALENs) and clustered regularly interspaced short palind
   139 scription activator-like effector nucleases (TALENs) and synthetic oligodeoxynucleotides into one-cel
   140 scription activator-like effector nucleases (TALENs) and the clustered regularly interspaced short pa
   141 scription activator-like effector nucleases (TALENs) are a new class of engineered nucleases that are
  
  
   144 scription activator-like effector nucleases (TALENs) are powerful new research tools that enable targ
   145 scription activator-like effector nucleases (TALENs) are programmable nucleases that join FokI endonu
   146 scription activator-like effector nucleases (TALENs) can be designed to cleave chosen DNA sequences, 
   147 scription activator-like effector nucleases (TALENs) comprise a powerful class of tools that are rede
   148 scription Activator-Like Effector Nucleases (TALENs) consist of a nuclease domain fused to a DNA bind
   149 scription activator-like effector nucleases (TALENs) enable genome engineering in cell culture and ma
   150 scription activator-like effector nucleases (TALENs) enable targeted mutagenesis in a variety of orga
  
   152 scription activator-like effector nucleases (TALENs) for genome engineering, we demonstrate efficient
   153 scription activator-like effector nucleases (TALENs) for targeted disruption of endogenous genes and 
   154 scription Activator-Like Effector Nucleases (TALENs) has provided a new experimental partnership for 
   155 scription activator-like effector nucleases (TALENs) have become a powerful tool for genome editing d
   156 nucleases (ZFNs) and TAL effector nucleases (TALENs) have been shown to induce targeted mutations, bu
   157 scription activator-like effector nucleases (TALENs) have emerged as a highly effective tool for geno
   158 scription activator-like effector nucleases (TALENs) have shown promise as facile and broadly applica
   159 scription activator-like effector nucleases (TALENs) induces apoptosis, inhibits growth, and reduces 
   160 scription activator-like effector nucleases (TALENs) is a valuable tool for precise, site-specific ge
   161 scription activator-like effector nucleases (TALENs) or clustered, regularly interspaced, short palin
   162 scription activator-like effector nucleases (TALENs) or RNA-guided clustered regularly interspaced sh
  
   164 scription activator-like effector nucleases (TALENs) provide a powerful new approach for targeted zeb
   165 scription activator-like effector nucleases (TALENs) provide powerful platforms for genome editing in
   166 scription activator-like effector nucleases (TALENs) represent a promising approach for targeted knoc
   167 scription activator-like effector nucleases (TALENs) that are based on bacterial TALEs fused to the F
   168 scription activator-like effector nucleases (TALENs) that recognize two adjacent unique DNA sequences
   169 on enzyme to produce TAL effector nucleases (TALENs) that, in pairs, bind adjacent DNA target sites a
   170 scription activator-like effector nucleases (TALENs) to completely eradicate all LEDGF/p75 expression
   171 scription activator-like effector nucleases (TALENs) to localize to mitochondria and cleave different
   172 scription activator-like effector nucleases (TALENs) to target interleukin-2 receptor subunit gamma (
  
   174 er nucleases (ZFNs), TAL effector nucleases (TALENs), and CRISPR-associated system 9 (Cas9) proteins,
   175 scription activator-like effector nucleases (TALENs), and CRISPR/Cas RNA-guided nucleases (RGNs).    
   176 scription activator-like effector nucleases (TALENs), completely removes ORN sensitivity to bombykol 
   177 nucleases (ZFNs) and TAL effector nucleases (TALENs), have made it possible to precisely modify plant
   178 scription activator-like effector nucleases (TALENs), relies on safe and effective means of deliverin
   179 cription Activator-Like Effectors Nucleases (TALENs) and Cas9-gRNA allows genetic modifications to be
   180 cription activator-like effectors nucleases (TALENs) with broadly improved DNA cleavage specificity, 
  
  
  
  
   185  finger nucleases (ZFNs) and Tale nucleases (TALENs), and has enabled us to insert a 15-kb inducible 
  
   187 e (TAL) effector domains fused to nucleases (TALENs) demonstrate enormous potential for genome editin
   188 ion activator-like [TAL] effector nucleases [TALENs], and homing endonucleases [also called meganucle
   189 ese results demonstrate the applicability of TALEN-mediated genome editing to a scalable process, whi
  
  
   192 tabase searches, we designed a collection of TALEN constructs to knockout 88 human genes that are ass
  
  
  
  
   197  report detailed genotypes and phenotypes of TALEN-edited MECP2 mutant cynomolgus monkeys serving as 
  
  
  
  
  
   203 m and demonstrate controlled co-injection of TALENs or CRISPR/Cas9 together with donor template into 
   204 tured cells, two plasmids encoding a pair of TALENs are co-transfected, followed by limited dilution 
  
  
   207  that one subunit of ZFNs and one subunit of TALENs can form a pair of hybrid nucleases with expanded
   208 smission data from CRISPR/Cas9 with those of TALENs and ZFNs and shows that efficiency of CRISPR/Cas9
  
  
   211 useful, user-friendly tools defining optimal TALEN designs for robust genome editing need to be devel
  
  
   214 iRNAs were not detected from CRISPR/Cas9- or TALEN-induced DSBs within the examined endogenous genes 
  
  
  
  
   219 ins, which are intrinsically cell-permeable; TALEN proteins, which can be internalized via conjugatio
   220 rest, SAPTA gives a ranked list of potential TALEN target sites, facilitating the selection of optima
   221 blished the scoring algorithm for predicting TALEN activity (SAPTA) as a new online design tool.     
  
  
  
  
   226  be designed to cleave chosen DNA sequences, TALENs have activity against related off-target sequence
  
   228  gene in the first coding exon with a single TALEN pair yielded trace LEDGF/p75 levels that were viro
  
   230    Coselection after treatment with a single TALEN-pair enabled isolation of colonies with mono- and 
  
   232  to the advent of the versatile and specific TALEN systems, and most recently the highly accessible C
  
   234 ciple, we transferred CCR5- and TCR-specific TALEN pairs for efficient targeted genome editing and ab
  
   236 and (4) output files designed for subsequent TALEN construction using the Golden Gate assembly method
  
   238 ludes engineered zinc finger proteins, TALEs/TALENs, and the CRISPR/Cas9 system as nucleases for geno
  
  
   241 ct cervical application of HPV16-E7-targeted TALENs effectively mutated the E7 oncogene, reduced vira
  
   243 ) and found that, with beta-globin-targeting TALENs, similar levels of on- and off-target activity in
   244 ese methods to identify, construct, and test TALENs that were used with HDR donors in hESCs to genera
  
  
  
   248 rescence in situ hybridization revealed that TALEN pairs targeting the Agouti locus induced site-dire
  
   250 s of the resulting transformants showed that TALEN-induced double strand breaks led to the introducti
  
  
  
   254 ed nucleotides, raising the possibility that TALENs might be used to perform allele-specific gene dis
  
  
  
   258 her, the results from our study suggest that TALENs have potential as a therapeutic strategy for HPV 
  
   260 oftware program, TALENSeek, (2) assemble the TALEN genes by combining golden gate cloning with modifi
   261 s, larger deletions that extended beyond the TALEN-binding sequences were also detected and were simi
  
  
  
  
  
   267 ts from the FLASH protocol, and (3) test the TALEN pairs in an amplification-based HDR assay that is 
  
   269  two newly developed gene-editing tools, the TALEN and CRISPR/Cas systems, we have developed a genome
  
  
  
  
  
  
   276 MiPs from dystrophic dogs that had undergone TALEN-mediated correction of the MD-associated mutation 
  
   278 and TALEN specificity, we profiled 30 unique TALENs with different target sites, array length and dom
  
  
   281 nd reduce CPI-associated toxicities, we used TALEN technology to render tumor-reactive T cells resist
  
  
   284 erimentally useful human cell lines, we used TALENs to definitively eradicate LEDGF/p75 by deleting e
  
  
   287 e generated a zyx mutant in Drosophila using TALEN endonucleases and used this to show that Zyx antag
   288 s in pig, goat, and cattle fibroblasts using TALEN mRNA and oligonucleotide transfection with efficie
  
   290 nerated genetic mosaic adult zebrafish using TALEN genome editing and demonstrate somatic inactivatio
  
  
  
   294   These studies expand the realm of verified TALEN activity from cultured human cells to an intact eu
  
  
   297 11-33% of 1-cell stage embryos injected with TALEN mRNAs targeting rb1 exon 2 or 3 develop tumors beg
  
  
   300  We observed improved efficiency using ZFNs, TALENs, two CRISPR/Cas9, and CRISPR/Cas9 nickase to targ
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