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1 TCR beta-chain CDR3-length distribution analysis using P
2 TCR beta-chain contacts are mostly through the variable
3 TCR beta-chain repertoires were polyclonal in infants.
4 TCR beta-chain V region gene diversity was determined by
5 TCR-beta and CDR-beta gene usage of single islet-infiltr
6 TCR-beta gene recombination and allelic exclusion were n
7 a similar increase was not observed in GT(0)/TCR-beta(0) mice, and the titer of alphaGal-specific Abs
12 erum titer of alphaGal-specific Abs in GT(0)/TCR-beta+ mice, but had no effect on the level of alphaG
16 -J alpha 281 TCR, flow cytometry of NK1.1(+) TCR beta(+) cells, and analysis of cytokine production b
17 esults in a significant reduction of NK1.1(+)TCR-beta(+) and CD1d tetramer-positive cells, consistent
18 chronic collagen-induced arthritis in DBA/1-TCR-beta transgenic mice, as well as collagen-induced ar
20 mentarity determining region 3 lengths of 24 TCR-beta chain V region families from CD4+ and CD8+ peri
21 Finally, and of importance, IL-2Ralpha(-/-) TCR-beta(-/-) mice had abrogation of liver and colon pat
22 assessed by the DNA sequence analysis of 50 TCR beta clones obtained by rapid amplification of cDNA
23 mensional structure of the complex between a TCR beta chain (mouse V beta8.2) and the SAG staphylococ
24 (TCR alpha) chains in mice transgenic for a TCR beta chain has allowed us to demonstrate a central r
27 cule on an antigen- presenting cell and to a TCR beta-chain, thereby causing activation of the T cell
28 t, complementation of Rag-2(-/)- mice with a TCR beta transgene restored ICN1-induced DP development
34 mplexes comprise a disulfide-linked pT alpha-TCR-beta heterodimer associated not only with CD3-gamma
37 rangement and allelic exclusion, we analyzed TCR beta chromatin structure in double negative (DN) thy
39 rs encoding the HIV-1-specific TCR alpha and TCR beta chains cloned from a CTL clone specific for an
40 3 proteins are expressed before pT alpha and TCR beta-chains in prothymocytes and are expressed intra
42 to accommodate juxtaposition of CD3gamma and TCR beta ectodomains and foster quaternary change that c
45 HSV-specific lesional CD4(+) cell clones and TCR beta -variable (TCRBV) sequencing confirmed that the
46 ns displayed differential MR1 dependency and TCR beta-chain bias, consistent with possible divergent
47 uction, homeostatic T cell proliferation and TCR beta-chain diversity in young (approximately 25 year
48 unique phenotypic traits of CD8(+) TILs and TCR beta chain (TCRbeta) clonotypic frequency in melanom
50 e the initiation of clonotypic TCR-alpha and TCR-beta gene rearrangement but is down-regulated in mos
51 method for expressing defined TCR-alpha and TCR-beta proteins from a single 2A peptide-linked multic
53 affinity purified on anti-TCR-alpha and anti-TCR-beta mAb columns had identical CS-protective activit
57 nscripts increased the levels of PTC-bearing TCR-beta transcripts in the nuclear fraction of cells.
58 productive "in-frame" T cell receptor beta (TCR beta), immunoglobulin (Ig) heavy (H) or Ig light (L)
59 n in-frame T cell receptor for antigen beta (TCR-beta) gene rearrangement will continue to mature.
60 The random nature of T-cell receptor-beta (TCR-beta) recombination needed to generate immunological
61 53(-/-) mice die of T-cell receptor-beta(-) (TCR-beta(-)) thymic lymphomas with translocations and ot
63 es and criteria for lineage choice when both TCR-beta and gammadelta-TCR are simultaneously expressed
64 human and mouse MAIT cells expressed a broad TCR-beta repertoire, and although the majority of human
68 h) cells stained positive for CD2, CD3, CD8, TCR beta-chain, and NK1.1 but did not express the B cell
70 erantigens stimulate T cells bearing certain TCR beta-chain variable regions when bound to MHC II mol
71 -cell-deficient (T-cell receptor beta chain [TCR-beta] -/- or TCR-betaxdelta -/-) mice was shown to e
74 by directly targeting the murinized constant TCR beta domain (TCRmu) with a zirconium-89 ((89)Zr)-lab
76 mma delta cells, newborn TCR beta-deficient (TCR beta(-/-)) thymi were grafted to IL-7(-/-) mice.
77 age clearance in T-cell receptor beta/delta (TCR-beta/delta) knockout (KO) and IgH-mu KO mice, respec
82 d the residues in the CDR3 region of the DN1 TCR beta-chain that were predicted to project between th
83 cell clones expressing the in vivo dominant TCR beta-chain sequences were identified in three patien
85 sequences of 55 spleen cDNA clones encoding TCR-beta genes are compared, and 7 diverse Vbeta familie
88 drives gene rearrangement at the endogenous TCR beta locus and results in the appearance of Vbeta5(-
89 ific transgenic mice lacking only endogenous TCR-beta chains also developed EAE, suggesting that in T
90 s, we designed a system where the endogenous TCR-beta is knocked out from the recipient cells using c
95 V CTL clones were all Vbeta13+ and expressed TCR beta-chains with highly homologous complementarity-d
96 th impaired Th2 cytokines, IL-17A expressing TCR beta (+) T cells were increased, while IL-22 express
97 HC and how they stimulate T cells expressing TCR beta chains from a number of different families, res
98 negative selection of thymocytes expressing TCR beta-chains reactive against several retroviral supe
100 ve (DN) thymocytes, which are permissive for TCR beta recombination, and in double positive (DP) thym
102 that Rho acts as an intracellular switch for TCR beta selection, the critical thymic-differentiation
103 tes exhibited a lower rate of mortality from TCR-beta(-) tumors, which harbored significantly elevate
106 l features of this interaction, we generated TCR beta-chain transgenic mice using a TCR derived from
107 s can be explained predominantly by germline TCR-beta locus factors and not TCR-beta allelic or HLA e
108 e Valpha24 Vbeta11 clones were shown to have TCR-beta CDR3 diversity and express the natural killer (
109 es an entirely different, more heterogeneous TCR beta-chain repertoire that fails to recognize specif
110 n expanded rapidly after OPC, exhibited high TCR-beta clonal diversity, and was absent in Rag1(-/-),
112 s, defined as those that expressed identical TCR beta-chain amino acid sequences and recurred in mult
117 urs in gammadelta-selected DN3 thymocytes in TCR-beta-/- mice and in IL2-GFP transgenic reporter mice
119 Interestingly, cross-analysis of individual TCR beta repertoires revealed a set >10,000 of the most
120 toire, with a median frequency of individual TCR beta-chain sequences of 1 in 2.4 x 10(7) CD4 T cells
122 reduced amounts of surface and intracellular TCR-beta protein and decreased levels of tcrbeta transcr
126 ase manifestations in T cell-deficient mice (TCR-beta x delta(-/-)), although it resulted in bacterem
127 ce were crossed with TCR-beta knockout mice (TCR-beta(0)) to generate double-knockout mice (GT(0)/TCR
129 eature was also observed for human and mouse TCR beta chains, although the alpha and beta chain V-gen
132 e co-ordinates of a recently reported murine TCR beta-chain crystal structure, and other documented i
133 hat contribute to the activity of the murine TCR beta enhancer in mature and immature T cell lines.
134 m of the D beta 1 gene segment in the murine TCR beta locus was deleted to assess its role in control
135 evelopment of TCR gamma delta cells, newborn TCR beta-deficient (TCR beta(-/-)) thymi were grafted to
140 revision requires the rearrangement of novel TCR beta-chain genes and depends on recombinase-activati
142 R repertoires focus solely on an analysis of TCR beta-chains, rather than the combined TCRalphabeta h
145 ue was used to determine the distribution of TCR beta-chain V region sequences expressed in the trans
148 survival of thymocytes lacking expression of TCR beta, showing hallmarks of hyperactive Notch signali
149 hymocytes are selected for the expression of TCR beta-chains with shorter CDR3 at the double-positive
150 lity to proliferate, which is independent of TCR beta-chain CDR3 sequence or precursor frequency.
151 a multiplex PCR assay for the CDR3 length of TCR beta-chains, we have found a striking increase in th
154 synovial fluid was analyzed using a panel of TCR beta variable region-specific monoclonal antibodies.
155 e deep and precisely normalized profiling of TCR beta repertoires in 39 healthy donors aged 6-90 y.
156 cell clone had functional rearrangements of TCR beta-chain genes using the Vbeta120.la and Jbeta1.1
160 otpads with reovirus, and the repertoires of TCR beta-chains expressed on virus-specific CD8(+) T cel
163 Furthermore, deep-sequencing analysis of TCR-beta (TRB) and TCR-alpha (TRA) rearrangements of CD3
166 tion of immune cells into the spinal cord of TCR-beta x delta(-/-) mice was reduced and the resident
167 mice with p53 deletion in thymocytes die of TCR-beta(-) tumors containing Tcralpha/delta translocati
168 ositive thymocytes, diminished expression of TCR-beta, and increased expression of CD25, suggesting a
171 D4(-)CD8(-) thymocytes during the process of TCR-beta chain rearrangement by a recombinase-independen
174 monkeys exhibited the dominant responses of TCR-beta complementarity-determining region 3-restricted
175 sive immune profiling and deep sequencing of TCR-beta V regions, two subsets of cTregs, based on expr
176 dily detectable in normal T1 cells, but only TCR-beta intermediates were detected in IL-7R-/- T1 cell
177 f secondary infection, we observed that only TCR-beta deficiency or simultaneous neutralization of IL
178 ymocytes die at later ages to TCR-beta(-) or TCR-beta(+) thymic lymphomas containing a similar patter
180 sets of CD8(+) cells expressing a particular TCR beta-chain variable region were more commonly identi
181 specificity of different SAGs for particular TCR beta chains, and for the observed influence of the T
182 on proliferation of T cells with particular TCR beta-chains, which occurs upon recognition of virall
183 o imply that the polymorphism of the porcine TCR beta segments is similar to that found in human.
185 lon treatment that mimics the process of pre-TCR beta-selection of thymocytes to the double positive
186 found that expression of these preassembled TCR beta-chains did not downregulate recombinational acc
188 biased and frequently dominated by a public TCR beta-chain encoded by the variable gene segment TRBV
189 et >10,000 of the most representative public TCR beta clonotypes, whose abundance among the top 100,0
190 an and murine T cells have shown that public TCR beta-chain rearrangements can dominate the Ag-specif
191 g three approaches: (a) in vivo quantitative TCR beta chain V segment and complementarity determining
193 -TCR alpha-chain (pT alpha) and a rearranged TCR beta-chain assemble to form the pre-TCR that control
194 selection, mice transgenic for a rearranged TCR beta-chain derived from conventional alphabeta T lym
197 Dbeta1-like sequence in numerous rearranged TCR beta cDNA suggests the existence of two D-J clusters
200 Thus, in vivo expression of the rearranged TCR beta-chain from a thymus-derived NK1.1+ Valpha14+ T
201 ed by the introduction of a fully rearranged TCR-beta transgene that precludes generation of out-of-f
204 toxin B (SEB) mutants to soluble recombinant TCR beta chain and to the human MHC class II molecule HL
206 he magnitude of the CD8(+) T cell responses, TCR beta-chain repertoires did not significantly differ
207 eukemic cells from the twins shared the same TCR beta gene rearrangement with an identical 11 bp N re
208 at >90% of the hybridomas expressed the same TCR beta-chain variable region (V(beta)10), and sequenci
212 selection of thymocytes that express shorter TCR beta-chain complementarity-determining region 3 (CDR
213 that most alphabeta T cells express a single TCR beta chain and most B cells express single IgH and I
214 ult from multiple interactions with a single TCR beta-chain or perhaps by cross-linking two TCR.
216 pha(b) permits higher levels of cell surface TCR beta expression and facilitates signaling from a CD3
217 In CD4 thymocytes expressing a fixed Tg TCR beta-chain, the associated TCRalpha sequences in wil
218 T cells lacking surface expression of the Tg TCR beta chain and expressing diverse, endogenously rear
221 ne is likely to be Tcrb-V13, indicating that TCR beta-chain usage is a determinant of susceptibility
226 xtremely poor shape complementarity, and the TCR beta chain complementarity-determining region 3 (CDR
227 omplexes with MHC class II molecules and the TCR beta chain, provide a framework for understanding th
228 RAG-/- mice, DJ and VDJ recombination at the TCR beta locus was functional, and normal numbers of NK
229 atures important for interaction between the TCR beta-chain and the peptide/MHC complex, we immunized
230 r emphasis on recognition of the pMHC by the TCR beta-chain, evinced by an increase in shape compleme
231 ehensive analysis of genes that comprise the TCR beta variable gene (TCRBV) repertoire of the common
234 pre-existing T cells commonly expressing the TCR beta chain variable region (TCR BV) 20 and increased
235 anscription in most cell types; however, the TCR beta enhancer (E beta) stimulates PD beta function s
236 o define specific structural features in the TCR beta chain that are important for the recognition of
238 arison, mice with targeted disruption of the TCR beta chain and expressing no alpha beta TCR(+) cells
242 hymic organs suppressed rearrangement of the TCR beta locus (but did not inhibit TCR gamma locus rear
244 on of a unique heterodimer consisting of the TCR beta-chain (TCRbeta) and a 33-kDa protein, FCp33.
246 expressing the variable gene segment of the TCR beta-chain 6 (Vbeta6) expanded in the spleens of mic
247 ally, we show that residue 29 in CDR1 of the TCR beta-chain affects recognition of the glutamic acid
248 recognition, in part similar to that of the TCR beta-chain and in part similar to the conventional a
250 -ray structures, NMR characterization of the TCR beta-chain dynamics reveals significant chemical shi
251 on, the results showed that 20 to 30% of the TCR beta-chain gene (TCRB) sequences found in one joint
255 MF; KF11) and identified common usage of the TCR beta-chain TRBV7 in eight of nine HLA B57 subjects e
256 and tumor regression through analysis of the TCR beta-chain V region gene products expressed in sampl
257 o far indicate increased interactions of the TCR beta-chain with the pMHC compared with their syngene
258 Typhimurium down-modulates expression of the TCR beta-chain, a molecule that is essential for Ag reco
262 which is consistent with the notion that the TCR beta-chain interacts in vivo preferentially with thi
263 of a particular mutant of SEC3 or SEB to the TCR beta chain, the greater its ability to stimulate T c
265 OVA-8:Kb complex C terminus overlap with the TCR beta-chain footprint, but that this footprint also e
271 f the most prominently induced site near the TCR-beta enhancer (E beta) in allelic exclusion by targe
273 hich revealed an unexpected influence of the TCR-beta chain on the avidity of CD1d:alpha-GalCer bindi
274 erences conferred by the Vbeta domain of the TCR-beta chain, with Vbeta8.2 conferring higher avidity
275 intron sequences from another member of the TCR-beta family also triggered strong down-regulation, s
279 mechanism for this downregulation using the TCR-beta gene, which acquires PTCs as a result of progra
280 n bacterial pneumonia, mice deleted of their TCR beta- and/or delta-chain were intratracheally inocul
283 terrelated than cTreg subsets based on their TCR-beta repertoires, but exhibited varied immune profil
284 lineage, but we also demonstrated that this TCR beta-chain was able to provide stronger TCR signals.
286 sion of this gene, which contains only three TCR-beta exons, exhibited efficient downregulation in re
287 combination and that in CD4+ CD8+ thymocytes TCR beta allelic exclusion does not result from inaccess
288 owever, when IL-7(-/-) thymi were grafted to TCR beta(-/-) mice, no development of graft-derived TCR
289 R beta-chain CDR3 regions were homologous to TCR beta-chains identified previously in allograft arter
290 x and p53 in thymocytes die at later ages to TCR-beta(-) or TCR-beta(+) thymic lymphomas containing a
291 ntroduced TCR alpha chain and the transgenic TCR beta chain from the original cytochrome c-specific T
292 We created mice expressing a transgenic TCR-beta chain that confers high affinity for self-lipid
293 e to monoclonal tumors with a single, unique TCR-beta chain and diverse TCR-alpha chains, pinpointing
296 that express Valpha11 paired with non-Vbeta3 TCR beta-chains (Vbeta6, Vbeta8.1/8.2, Vbeta8.3, and Vbe
297 eptor (TCR) alpha chain paired with a Vbeta8 TCR beta chain in mice, or the homologous Valpha24-Jalph
298 inked glycosphingolipid specificity, whereas TCR beta-chains can confer heterogeneous additional reac
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