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1 TLS activity is an important risk factor for the initiat
2 TLS and TS depend on site-specific PCNA K164 monoubiquit
3 TLS density and GC formation were each reduced in chemot
4 TLS is carried out by low-fidelity DNA polymerases that
5 TLS is initiated when the Rad6/Rad18 complex monoubiquit
6 TLS polymerases are capable of bypassing a distorted tem
7 TLS RNA can provide a glimpse into the structural basis
8 TLS(+) tissues exhibited a significantly increased expre
9 TLSs in this model were spatially associated with >90% o
13 hat the E3 ubiquitin ligase, which activates TLS repair by monoubiquitination of PCNA, is also affect
15 ly involved in priming replication, are also TLS proficient and therefore may play important roles in
16 gy, and gene expression profiling to analyze TLS formation in human lung squamous cell carcinoma (LSC
17 the opposite effects of RecA on Pol III and TLS replisomes, we propose that RecA acts as a switch to
18 mportant role in PCNA monoubiquitination and TLS in a FANCD2 monoubiquitination and HR-independent ma
19 uclear antigen (PCNA) monoubiquitination and TLS polymerase recruitment; however, the regulatory step
20 nalyzed the effects of PolDIP2 on normal and TLS by five different human specialized Pols from three
22 ritic cells (DC) present in tumor-associated TLS can provide a specific marker of these structures.
27 capable of directly bypassing DNA damage by TLS, as well as repriming replication downstream of impe
28 , our results show how tumors infiltrated by TLS-associated mature DC generate a specific immune cont
29 structural insights into PCNA recognition by TLS DNA polymerases that help better understand TLS regu
32 prokaryotes and eukaryotes possess canonical TLS polymerases (Y-family Pols) capable of traversing bl
33 ients treated with neoadjuvant chemotherapy, TLS density was similar, but GC formation was impaired a
40 indicated that mRNAs harboring a distinctive TLS can move from transgenic roots into wild-type leaves
41 r low fidelity of synthesis opposite 3-dMeA, TLS opposite this lesion replicates DNA in a highly erro
47 yeast, POLD3 is required for fully effective TLS, its loss resulting in hypersensitivity to a variety
48 nd demonstrate that ubiquitination of either TLS polymerase is a prerequisite for their physical and
50 reover, we observed that MSH2 can facilitate TLS across cyclobutane pyrimidine dimers photoproducts i
53 , a function unique to Poleta among Y-family TLS polymerases and dissociable from its catalytic activ
54 an important role in recruitment of Y-family TLS polymerases to stalled replication forks after DNA d
55 polymerase exchange that gains low-fidelity TLS polymerases access to DNA is mediated by their inter
58 ts and showed that Rev1 is indispensable for TLS mediated by Poleta, Poliota, and Polkappa but is not
60 sed on these results, we propose a model for TLS across S-cdA and S-cdG in human cells, where Pol eta
61 ise, or consecutive, thermodynamic model for TLS folding is developed, which is in good agreement wit
67 eta function together and mediate error-free TLS, whereas in the other, poltheta functions in an erro
69 creasing amounts of the PIP-box peptide from TLS DNA polymerase poleta, suggesting that Rev1-BRCT and
70 etal-ion dependent formation of a functional TLS domain from unfolded RNAs via two consecutive steps:
73 mmon molecular players including TDP-43, FUS/TLS, ubiquilin-2, VCP, and expanded hexanucleotide repea
74 s indicate that HuR regulates TDP-43 and FUS/TLS expression and that loss of HuR-mediated RNA process
75 f HuR in regulating two RBPs, TDP-43 and FUS/TLS, that have been linked genetically to amyotrophic la
78 Mutations in the RNA-binding protein FUS/TLS (FUS) have been linked to the neurodegenerative dise
83 called translesion synthesis (TLS), but how TLS polymerases gain access to the DNA template remains
84 elegans and zebrafish embryos, and show how TLS-SPIM can facilitate cell biology research in multice
85 Is in DDR pathways (BER, MMR, NER, NHEJ, HR, TLS, and ICL repair) are specifically discussed for inhi
90 highlight the importance of GC formation in TLS during tumor development and treatment.Significance:
91 ta, Poliota, and Polkappa, which function in TLS in highly specialized ways opposite a diverse array
92 cialized DNA repair polymerase, functions in TLS and allows for DNA replication complexes to bypass l
95 A) are expressed early and genes involved in TLS (i.e., Pol V) are expressed late during the bacteria
96 rgeting the LTalpha1beta2/LTbetaR pathway in TLS-associated pathologies might impair a natural prores
100 ied as a common transposon insertion site in TLS-ERG-induced disease, strongly validating the coopera
101 ong the common transposon insertion sites in TLS-ERG-driven leukemia, suggesting that a key mechanism
104 results establish the role of NPM1 as a key TLS regulator, and suggest a mechanism for the better pr
105 ells expressing translocated in liposarcoma (TLS)-ERG, an activated form of ERG found in human leukem
109 one at inserting nucleotides opposite 1-MeA, TLS opposite this lesion in human cells occurs in a high
110 ion of DNA polymerase complexes that mediate TLS and describe how this knowledge is beginning to tran
111 is in CSCs, indicating that Pol eta-mediated TLS contributes to the survival of CSCs upon cisplatin t
112 have intrinsically enhanced Pol eta-mediated TLS, allowing CSCs to survive cisplatin treatment, leadi
113 as monoubiquitination by Rad6/Rad18 mediates TLS, extension of this ubiquitin to a polyubiquitin chai
114 eet selective plane illumination microscopy (TLS-SPIM) with real-time light-sheet optimization was de
117 des significant interaction between multiple TLSs, which fully describes these observations, as well
119 the laser return intensity of green (532-nm) TLS correlates with changes in the de-epoxidation state
121 quenching (NPQ), and compare the ability of TLS to quantify these parameters with the passively meas
122 e demonstrate the 3D live imaging ability of TLS-SPIM by imaging cellular and subcellular behaviours
125 tion method for the simultaneous analysis of TLS and HDR across defined DNA lesions in mammalian geno
128 This suggests that the in vivo fidelity of TLS Pols is regulated by factors such as post-translatio
129 r findings highlight the pivotal function of TLS in shaping the immune character of the tumor microen
131 In this study, we evaluated the influence of TLS on the characteristics of the immune infiltrate in c
132 D2 monoubiquitinations (surrogate markers of TLS and FA pathway activation, respectively) and with at
134 Using a viral-induced, resolving model of TLS formation in the salivary glands of adult mice we de
140 ertion and extension steps, respectively, of TLS across S-cdA and S-cdG; human Pol kappa and Pol eta
142 (4)-alkyldT lesions and defined the roles of TLS polymerases in bypassing these lesions in human cell
144 We also characterized sequential stages of TLS maturation in LSCC culminating in the formation of g
145 ut both the insertion and extension steps of TLS opposite 3-dMeA, and in the Polzeta pathway, Polzeta
146 nucleotide insertion and extension steps of TLS, and in the third pathway, Polzeta would extend from
147 rocess, provide our current understanding of TLS on leading and lagging strand templates, and propose
150 cing BAFF in vivo prevented the formation of TLSs and lupus nephritis; however, it did not reduce imm
152 n NIK(+) ECs, (pre)FDCs, and the presence of TLSs, indicating that NIK(+) ECs may not only be importa
154 ry of DDT in the late 1960s, most studies on TLS in eukaryotes have focused on DNA lesions resulting
157 with the T residue, Poliota would carry out TLS opposite 1-MeA, the ability of Poleta to replicate t
160 of a high-fidelity DNA polymerase to perform TLS with 8-oxo-guanine (8-oxo-G), a highly pro-mutagenic
161 deficient human Poldelta holoenzyme performs TLS of abasic sites in vitro much more efficiently than
164 ed by DNA damage are replaced by error-prone TLS enzymes responsible for the majority of mutagenesis
165 ly carry out the majority of the error-prone TLS of dG-C8-IQ, whereas pol eta is involved primarily i
167 ation of POLD3 with Rev1 and the error-prone TLS polymerase Pol zeta, and elevates mutagenesis that r
168 t increased recruitment of other error-prone TLS polymerases (Polkappa and Poliota) after UV irradiat
170 hat Spartan negatively regulates error-prone TLS that is dependent on POLD3, the accessory subunit of
174 deepen insights into the vital role of RAD6/TLS in platinum drug tolerance and reveal clinical benef
176 el purports that ubiquitinated PCNA recruits TLS polymerases such as pol eta to sites of DNA damage w
177 We show that NPM1 (nucleophosmin) regulates TLS via interaction with the catalytic core of DNA polym
178 ed role in lupus nephritis by inducing renal TLSs and regulating the position of T cells within the g
185 ment, we tested translation-libration-screw (TLS), liquid-like motions (LLM), and coarse-grained norm
186 was able to successfully perform abasic site TLS without template realignment and inserting preferabl
187 anslesion DNA synthesis (TLS), a specialized TLS pol is recruited to catalyze stable, yet often erron
188 thesis (TLS) during S-phase uses specialized TLS DNA polymerases to replicate a DNA lesion, allowing
189 ts made with the Tunable Laser Spectrometer (TLS) on Curiosity using a distinctive spectral pattern s
192 -studied systems is the tRNA-like structure (TLS) domain, which has been found to occur in many plant
193 , a prototype being the tRNA-like structure (TLS) found at the 3' end of the turnip yellow mosaic vir
195 he presence of tertiary lymphoid structures (TLS) in patients with non-small cell lung cancer (NSCLC)
198 transcripts harboring tRNA-like structures (TLSs) that were found to be enriched in the phloem strea
206 mutations of the translesion DNA synthesis (TLS) gene REV7 (also known as MAD2L2), which encodes the
209 plate strand, and translesion DNA synthesis (TLS) is used to rescue progression of stalled replisomes
210 ble of catalyzing translesion DNA synthesis (TLS) on certain DNA lesions, and accumulating data sugge
211 th an appropriate translesion DNA synthesis (TLS) polymerase, followed by PCR amplification and next-
214 ce strategies are translesion DNA synthesis (TLS), in which low-fidelity DNA polymerases bypass the b
222 the insertion step of translesion synthesis (TLS) across the (5'S) diastereomers of cdA and cdG.
224 distinct mechanisms: translesion synthesis (TLS) and template switching (TS)-dependent pathways.
227 Rev1 is a Y-family translesion synthesis (TLS) DNA polymerase involved in bypass replication acros
229 Here we identify the translesion synthesis (TLS) DNA polymerases (Pols) required for replicating thr
231 ells where individual translesion synthesis (TLS) DNA polymerases were depleted by the CRISPR/Cas9 ge
241 everal members of the translesion synthesis (TLS) pathway, a DNA damage tolerance pathway, and that t
243 ver, E. coli contains translesion synthesis (TLS) Pols II, IV, and V that also function with the heli
244 analyzed the roles of translesion synthesis (TLS) Pols in the replication of 3-MeA-damaged DNA in hum
249 nt with activation of translesion synthesis (TLS) under these conditions, SAHA and cisplatin cotreatm
250 xcision repair (NER), translesion synthesis (TLS), and recombination each play a role in drug toleran
251 s in a process called translesion synthesis (TLS), but how TLS polymerases gain access to the DNA tem
252 ncerted activities of translesion synthesis (TLS), Fanconi anemia (FA), and homologous recombination
253 r DNA repair pathway, translesion synthesis (TLS), is disrupted by BPLF1, which deubiquitinates the D
255 a core factor in DNA translesion synthesis (TLS), the postreplicative bypass of damaged nucleotides.
256 genomes by promoting translesion synthesis (TLS), this comes at a cost of potentially error-prone le
263 d T cell proliferation rates increased in TA-TLSs upon Treg cell depletion, leading to tumor destruct
265 nature of DNA replication, it is likely that TLS on the leading and lagging strand templates is uniqu
267 g through 1-MeA in human cells and show that TLS through this lesion is mediated via three different
268 xacerbate a local immune response, such that TLS formation in tumors may help promote an efficacious
270 SOS response, it has long been thought that TLS was the last recourse to bypass DNA lesions when rep
280 survival after DNA damage, inhibition of the TLS pathway has emerged as a potential target for the de
281 r, PCNA, and inhibits the recruitment of the TLS polymerase, polymerase eta (Pol eta), after damage t
282 ings establish that PolDIP2 can regulate the TLS polymerase and primer extension activities of PrimPo
283 efined against the diffuse data, whereas the TLS and NM models provide more detailed and distinct des
286 These data support Poldelta contributing to TLS in vivo and suggest that the mutagenesis resulting f
289 xic stress, bacterial cells give priority to TLS, a minor pathway able to generate genetic diversity
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