ライフサイエンスコーパス: Thermotoga maritima

1 UvrB from Bacillus caldotenax and UvrC from Thermotoga maritima.

2 tal structure of most of the FliN protein of Thermotoga maritima.

3 sequence of the hyperthermophilic bacterium Thermotoga maritima.

4 structure of the C-terminal 70% of FliG from Thermotoga maritima.

5 d loop of the group I NifS-like protein from Thermotoga maritima.

6 opic labeling of a sigma70-like subunit from Thermotoga maritima.

7 o the proteome of the thermophilic bacterium Thermotoga maritima.

8 ay in the marine hyperthermophilic bacterium Thermotoga maritima.

9 genome of Mycoplasma genitalium, and 23% in Thermotoga maritima.

10 the crystal structure to 2.2 A of MinC from Thermotoga maritima.

11 n was detected in the thermophilic bacterium Thermotoga maritima.

12 minators of this type, with the exception of Thermotoga maritima.

13 he genome of the hyperthermophilic bacterium Thermotoga maritima.

14 ecombinant proteins from the model bacterium Thermotoga maritima.

15 liG-C from the hyperthermophilic eubacterium Thermotoga maritima.

16 Here, we describe a UDG from the thermophile Thermotoga maritima.

17 sequences in the hyperthermophilic bacterium Thermotoga maritima.

18 gulator from the hyperthermophilic bacterium Thermotoga maritima.

19 in ThyX from the hyperthermophilic bacterium Thermotoga maritima.

20 protein in the hydrogen-producing bacterium Thermotoga maritima.

21 raction modes of chemoreceptor and CheW from Thermotoga maritima.

22 e sugar kinome in the thermophilic bacterium Thermotoga maritima.

23 otoga sp. strain RQ2 is probably a strain of Thermotoga maritima.

24 eW and the P4-P5 fragment of CheA, both from Thermotoga maritima.

25 exonuclease activity in endonuclease V from Thermotoga maritima.

26 amined a deflavinated FDP (deflavo-FDP) from Thermotoga maritima.

27 catalysis by DHFR from the hyperthermophile Thermotoga maritima.

28 e central metabolic network of the bacterium Thermotoga maritima.

29 5 angstrom (A), obtained for components from Thermotoga maritima.

30 we have characterized an ExoVII homolog from Thermotoga maritima.

31 ichia coli, and purified untagged MreB1 from Thermotoga maritima.

32 ion of P1 and P3P4 from the hyperthermophile Thermotoga maritima.

33 in vitro methylation of chemoreceptors from Thermotoga maritima, a hyperthermophile that has served

34 prokaryotes and eukaryotes, was cloned from Thermotoga maritima, a hyperthermophilic bacterium.

35 o acid sequence level to the enzyme found in Thermotoga maritima, a thermophilic eubacteria, and sugg

36 me bacteria, including the hyperthermophiles Thermotoga maritima and Aquifex aeolicus.

37 Co(2+)-requiring alkaline phosphatases from Thermotoga maritima and Bacillus subtilis have a His and

38 Alkaline phosphatases from organisms such as Thermotoga maritima and Bacillus subtilis require cobalt

39 ochemical properties of a TF:S7 complex from Thermotoga maritima and determined its crystal structure

40 We have created a series of Thermotoga maritima and Escherichia coli pseudouridine 5

41 We expressed and purified MpgII from Thermotoga maritima and found that the enzyme releases b

42 d the crystal structure of the PanK-III from Thermotoga maritima and identified it as a member of the

43 Co-cultivation of the hyperthermophiles Thermotoga maritima and Methanococcus jannaschii resulte

44 eus, and two from the Gram-negative bacteria Thermotoga maritima and Pseudomonas aeruginosa.

45 have characterized the ECF transporters from Thermotoga maritima and Streptococcus thermophilus.

46 Bacillus subtilis, Sulfolobus tokodaii, and Thermotoga maritima) and two eukaryotic (Saccharomyces c

47 a-glycosidases from Sulfolobus solfataricus, Thermotoga maritima, and Caldocellum saccharolyticum.

48 P superfamilies against the entire genome of Thermotoga maritima, and make over a 100 new fold predic

49 ic organism, the hyperthermophilic bacterium Thermotoga maritima, and those of close homologs from me

50 r to the KH1 domain of the NusA protein from Thermotoga maritima, another cold-shock associated RNA-b

51 of HU from the hyperthermophilic eubacterium Thermotoga maritima are shown here to differ significant

52 rate-binding domains of HemK from E.coli and Thermotoga maritima are structurally similar, despite th

53 Using the hydrogenase maturase HydE from Thermotoga maritima as a template, we obtained several u

54 ion crystal structure of lysine bound to the Thermotoga maritima asd lysine riboswitch ligand-binding

55 ucible transcriptional repressor, HrcA, from Thermotoga maritima at 2.2A resolution.

56 of the PLP synthase complex (YaaD-YaaE) from Thermotoga maritima at 2.9 A resolution.

57 9 family proteins from a variety of sources (Thermotoga maritima, Bacillus subtilis, Acinetobacter ba

58 structure of the FliY catalytic domain from Thermotoga maritima bears strong resemblance to the midd

59 The open reading frame TM1643 of Thermotoga maritima belongs to a large family of protein

60 In Thermotoga maritima both candidate genes (in an original

61 ed to map conformational states of CorA from Thermotoga maritima by determining which residues suppor

62 -examined the completely sequenced genome of Thermotoga maritima by employing the combined use of the

63 haracterize the CheA-receptor interaction in Thermotoga maritima by NMR spectroscopy and validate the

64 f an enzyme of unknown activity, Tm0936 from Thermotoga maritima, by docking high-energy intermediate

65 We show here that the Cmr complex from Thermotoga maritima can cleave an ssRNA target that is c

66 owever, we show that both RimO and MiaB from Thermotoga maritima catalyze methyl transfer from SAM to

67 previously isolated by random sequencing of Thermotoga maritima cDNA clones.

68 The 2.6 A resolution crystal structure of Thermotoga maritima CheA (290-671) histidine kinase reve

69 cture of a soluble ternary complex formed by Thermotoga maritima CheA (TmCheA), CheW, and receptor si

70 investigate the two ATP-binding sites of the Thermotoga maritima CheA dimer (TmCheA) and the single s

71 The structure of Thermotoga maritima CheA domain P2 in complex with CheY

72 of nucleotide binding to the active site of Thermotoga maritima CheA was investigated using stopped-

73 ity of the phospho-accepting His (His-45) in Thermotoga maritima CheA.

74 thylation analyses utilizing S. enterica and Thermotoga maritima CheR proteins and MCPs indicate that

75 sed on a crystal structure of the homologous Thermotoga maritima class III RNR, showing its architect

76 rystal structures of a fragment of MetH from Thermotoga maritima comprising the domains that bind Hcy

77 ities, while the hyperthermophilic bacterium Thermotoga maritima contains only one, pyruvate ferredox

78 The copper transport ATPase from Thermotoga maritima (CopA) provides a useful system for

79 Thermotoga maritima CorA (TmCorA) is the only member of

80 The crystal structures of Thermotoga maritima CorA provide an excellent structural

81 The crystal structure of Thermotoga maritima CorA shows a homopentamer with two t

82 eolicus GyrA/ParC CTD with the GyrA CTD from Thermotoga maritima creates an enzyme that negatively su

83 Crystals of DAHPS from Thermotoga maritima (DAHPS(Tm)) were grown in the presen

84 glucose-6-phosphate dehydrogenase (Gpd) from Thermotoga maritima, demonstrated robust activity over a

85 scattering studies of thermostable CheA from Thermotoga maritima determine that the His-containing su

86 hile those of Mycobacterium tuberculosis and Thermotoga maritima did not.

87 ymerase derived from Thermus species Z05 and Thermotoga maritima DNA polymerases.

88 ed the 1.8-A resolution crystal structure of Thermotoga maritima DrrB, providing a second structure o

89 arrel domain from the thermophilic bacteria, Thermotoga maritima, enabled an NMR-based site-specific

90 The gene buk2 from Thermotoga maritima encodes a member of the ASKHA (aceta

91 nserved residues D43, E89, D110, and H214 in Thermotoga maritima endonuclease V catalysis.

92 was performed in nine conserved positions of Thermotoga maritima endonuclease V to identify amino aci

93 t seven conserved motifs of the thermostable Thermotoga maritima endonuclease V to probe for residues

94 te of CspTm, a small cold-shock protein from Thermotoga maritima, engineered to contain a single tryp

95 Thermotoga maritima exo-beta-fructosidase (BfrA) secrete

96 , we showed that FMN-free diferrous FDP from Thermotoga maritima exposed to 1 equiv NO forms a stable

97 ors with a single enzyme 'model system', the Thermotoga maritima family 1 beta-glucosidase, TmGH1.

98 he hyperthermophilic and anaerobic bacterium Thermotoga maritima ferments a wide variety of carbohydr

99 interaction between the N-terminal domain of Thermotoga maritima FliG (FliG(N)) and peptides correspo

100 Furthermore, we show that Thermotoga maritima FliM and FliN form a 1:3 complex str

101 e (6PGDH) from a hyperthermophilic bacterium Thermotoga maritima from its natural coenzyme NADP(+) to

102 of peptide chain release factor 1 (RF1) from Thermotoga maritima (gi 4981173) at 2.65 Angstrom resolu

103 The crystal structures of Thermotoga maritima GTase and its complex with the inhib

104 lease V from the hyperthermophilic bacterium Thermotoga maritima has been cloned and expressed in Esc

105 -isopentenyladenosine of tRNA in E. coli and Thermotoga maritima, has been demonstrated to harbor two

106 HK853 and its response regulator RR468 from Thermotoga maritima, here we report a pH-mediated confor

107 Thermotoga maritima HpkA is a transmembrane histidine ki

108 at HU from the hyperthermophilic eubacterium Thermotoga maritima HU bends DNA and constrains negative

109 presents a 2.3-kb locus with similarity to a Thermotoga maritima hypothetical protein, while another

110 report three crystal structures of ThiI from Thermotoga maritima in complex with a truncated tRNA.

111 ion of a sensor HK, one from the thermophile Thermotoga maritima in complex with ADPbetaN at 1.9 A re

112 heterologously produced the NfnAB complex of Thermotoga maritima in Escherichia coli, provided kineti

113 ve solved the crystal structure of FtsA from Thermotoga maritima in the apo and ATP-bound form.

114 ed five different structures of FGAR-AT from Thermotoga maritima in the presence of substrates, a sub

115 production of the GH10 xylanase Xyl10B from Thermotoga maritima in transplastomic plants and demonst

116 chaeoglobus fulgidus, and from the bacterium Thermotoga maritima) into the E. coli expression vector

117 Thermotoga maritima is a marine hyperthermophilic microo

118 work, a structure of the PurLQS complex from Thermotoga maritima is described revealing a 2:1:1 stoic

119 Structural characterization of Thermotoga maritima IscU by CD and high resolution NMR y

120 of the 174-nucleotide sensing domain of the Thermotoga maritima lysine riboswitch in the lysine-boun

121 Here we report that Thermotoga maritima MazG protein (Tm-MazG), the product

122 pe and C150/154/157A triple variant forms of Thermotoga maritima MiaB have revealed the presence of t

123 dy the assembly and mechanical properties of Thermotoga maritima MreB in the presence of different nu

124 Here, we studied the assembly of Thermotoga maritima MreB triggered by ATP in vitro and c

125 A whole-genome alignment of Thermotoga maritima MSB8 and Thermotoga neapolitana NS-E

126 The 1,860,725-base-pair genome of Thermotoga maritima MSB8 contains 1,877 predicted coding

127 sequence of the hyperthermophilic bacterium Thermotoga maritima MSB8 presents evidence for lateral g

128 The hyperthermophilic bacterium Thermotoga maritima MSB8 was grown on a variety of carbo

129 Molecular replacement with the Thermotoga maritima NifS model was used to determine pha

130 ng growth of the hyperthermophilic bacterium Thermotoga maritima on 14 monosaccharide and polysacchar

131 hemical studies demonstrate that TM1635 from Thermotoga maritima, originally annotated as a putative

132 tructure of a type III PanK, the enzyme from Thermotoga maritima (PanK(Tm)), solved at 2.0-A resoluti

133 The extremophile Thermotoga maritima possesses a remarkable array of carb

134 The hyperthermophilic eubacterium Thermotoga maritima possesses an operon encoding an Hsp7

135 Endonuclease V obtained from Thermotoga maritima preferentially cleaves purine mismat

136 Surprisingly, even Thermotoga maritima, previously considered to have only

137 n success, DXMS analysis was attempted on 24 Thermotoga maritima proteins with varying crystallizatio

138 C-terminal amphipathic helix in vitro using Thermotoga maritima proteins.

139 Here, we report the analysis of the Thermotoga maritima proteome, in which we compare the pr

140 The crystal structures of Thermotoga maritima Psi55S, and its complex with RNA, ha

141 les but later recolonized a hot environment (Thermotoga maritima) relied in their evolutionary strate

142 ith Lactobacillus casei, and 23 and 40% with Thermotoga maritima, respectively.

143 cture of this C-terminal domain of FliN from Thermotoga maritima revealed a saddle-shaped dimer forme

144 ure of the FliM middle domain (FliM(M)) from Thermotoga maritima reveals a pseudo-2-fold symmetric to

145 main (P1) from the chemotaxis kinase CheA of Thermotoga maritima reveals a remarkable degree of struc

146 at 3.85 A resolution of the RNA component of Thermotoga maritima ribonuclease P.

147 es (F17 and R89) are essential for efficient Thermotoga maritima RNase P activity.

148 We report the crystal structure of the Thermotoga maritima RNase P holoenzyme in complex with t

149 at the cytoplasmic helix-turn-helix motif of Thermotoga maritima RodZ directly interacts with monomer

150 The 1.6 A crystal structure of Thermotoga maritima RuvB together with five mutant struc

151 Unlike endonuclease V from Thermotoga maritima, Salmonella endonucleae V can only t

152 Here, we report a crystal structure of Thermotoga maritima SecA at 1.9 A resolution.

153 The recent crystal structure of the Thermotoga maritima SecA-SecYEG complex shows the ATPase

154 ur data support the in vivo relevance of the Thermotoga maritima SecA.SecYEG crystal structure that v

155 iety of contexts, including the structure of Thermotoga maritima sigmaA region 4 described herein.

156 itor binding to potently inhibited Sirt1 and Thermotoga maritima Sir2 and to moderately inhibited Sir

157 of the N and C-terminal globular domains of Thermotoga maritima SMC in Escherichia coli by replacing

158 The 2.17 A resolution crystal structure of a Thermotoga maritima soluble receptor (Tm14) reveals dist

159 sophile Escherichia coli and the thermophile Thermotoga maritima, subunit dissociation activates at t

160 occasionally found also in bacteria such as Thermotoga maritima that do not utilise a PEP-PTS system

161 f loop 2, which are analogous to residues in Thermotoga maritima that mediate cross-talk.

162 nate lyase from the thermophilic eubacterium Thermotoga maritima, the archaebacterial lyase contains

163 we report the structures of hTK1 and of the Thermotoga maritima thymidine kinase (TmTK) in complex w

164 crystal structures of complexes between the Thermotoga maritima (Tm) NadA K219R/Y107F variant and (i

165 The Thermotoga maritima TM0065 gene codes for a protein (TM-

166 tm0322) from the hyperthermophilic bacterium Thermotoga maritima (TM0322).

167 Mechanistic studies of a FDTS from Thermotoga maritima (TM0449) are presented here.

168 he genome of the hyperthermophilic bacterium Thermotoga maritima, TM0504 encodes a putative signaling

169 ed three-dimensional structure of GK-II from Thermotoga maritima (TM1585; PDB code 2b8n) revealed a n

170 Thermotoga maritima (Tma) EndoV recognizes and primarily

171 rofolate reductase from the hyperthermophile Thermotoga maritima (TmDHFR) are presented.

172 rofolate reductase from the hyperthermophile Thermotoga maritima (TmDHFR) has been examined by enzyme

173 R) and the dimeric, thermophilic enzyme from Thermotoga maritima (TmDHFR).

174 al analysis of GH36 alpha-galactosidase from Thermotoga maritima (TmGalA).

175 o be a potent inhibitor (Ki = 8.2 nM) of the Thermotoga maritima TmGH1 beta-glucosidase.

176 otein from the hyperthermostable eubacterium Thermotoga maritima, TmHU as an efficient gene transfer

177 N-utilizing substance A protein (NusA) from Thermotoga maritima (TmNusA), a protein involved in tran

178 ding by the EcfS subunit for riboflavin from Thermotoga maritima, TmRibU.

179 of the GDP complex of the YjeQ protein from Thermotoga maritima (TmYjeQ), a member of the YjeQ GTPas

180 olution to TrpB from Pyrococcus furiosus and Thermotoga maritima to generate a suite of catalysts for

181 The gene for the Thermotoga maritima Trk potassium transporter component

182 TruB apo enzyme, as well as the structure of Thermotoga maritima TruB in complex with RNA.

183 In Thermotoga maritima, two PhoU homologues have been ident

184 RNase III of the hyperthermophilic bacterium Thermotoga maritima was analyzed using purified recombin

185 synthase from the thermophilic microorganism Thermotoga maritima was cloned, and the enzyme was overe

186 protein from the hyperthermophilic bacterium Thermotoga maritima was determined at 1.2-A resolution b

187 Ribosome recycling factor (RRF) of Thermotoga maritima was expressed in Escherichia coli fr

188 Previously, Tm0936 from Thermotoga maritima was shown to catalyze the deaminatio

189 NagA from Thermotoga maritima was shown to require a single divale

190 domains from a hyperthermophilic bacterium, Thermotoga maritima, was cloned and expressed in Escheri

191 it of RNase P from a thermophilic bacterium, Thermotoga maritima, was overexpressed in and purified f

192 M0487 (a 102-residue alpha+beta protein from Thermotoga maritima), we predicted the complete, topolog

193 e conserved hypothetical protein TM0979 from Thermotoga maritima, we demonstrate the capabilities of

194 rototyping it using the simple microorganism Thermotoga maritima, we show our model accurately simula

195 atabolite-linked transcriptional networks in Thermotoga maritima, we used full-genome DNA microarray

196 mophilic eubacteria Thermus thermophilus and Thermotoga maritima were cloned, sequenced, and expresse

197 he heterodimeric ABC exporter TM287/288 from Thermotoga maritima, which contains a non-canonical ATP

198 f a larger fragment of the FliG protein from Thermotoga maritima, which encompasses the middle and C-

199 omes of several unusual organisms, including Thermotoga maritima, whose genome reveals extensive pote

200 ated interactions between FliM and FliG from Thermotoga maritima with X-ray crystallography and pulse

201 Thermotoga maritima XseA/B homologs TM1768 and TM1769 we