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1 Trp analogues are also valuable as building blocks for m
2 Trp-Pro was shown to have high 2,2'-azino-bis (3-ethylbe
3 uenching of the photoexcited tryptophan 14 (*Trp(14)) residue is in part due to an electron transfer
4 is largely abolished when residues Lys(17), Trp(20), Tyr(24), or Arg(26) are mutated resulting in di
5 ical thioredoxin-fold with a Cys(19)-Pro(20)-Trp(21)-Cys(22) motif, and an insertion consisting of a
6 at this structural motif, a minimal Pro(314)-Trp(316) turn, is essential for HCV RNA replication, and
8 ptor primarily by the residues Tyr-35(1.39), Trp-84(2.60), and Arg-167(ECL2), similar to the antagoni
9 site, including residues Tyr-37(I:07/1.39), Trp-86(II:20/2.60), and Phe-109(III:09/3.33) The small m
12 re induced by the C-terminal residues Asp-78-Trp-82 of EcMazE, which are also responsible for strong
15 issing from Chlamydia Thus, how Chlamydia, a Trp auxotroph, responds to Trp starvation in the absence
16 f sensor via the simultaneous inclusion of a Trp residue but also as a turn-on sensor via the competi
18 of highly conserved neighboring amino acids (Trp-68 and Lys-170) that control the rate of channel ope
22 irmed the critical importance of Tyr-362 and Trp-385 in mediating the ING3PHD-H3K4me3 interaction.
23 matic cage composed of Tyr-362, Ser-369, and Trp-385 that accommodate the tri-methylated side chain o
24 ur Trp residues with two of them, Trp-40 and Trp-38, in the substrate binding sites near the tunnel e
25 bic platform defined by residues Trp-711 and Trp-106, located in a highly mobile loop, appears able t
26 was completely symmetrical, rich in Arg and Trp residues, and able to adopt a native RTD-1-like stru
29 it of detection (0.5nM and 120nM for Kyn and Trp detection, respectively) and a broad linear range of
32 re we studied the role of the CBM-linker and Trp-38 of TrCel7A with respect to binding affinity, on-
33 th the exception of two amino acids (Met and Trp), all other amino acid residues are each encoded by
38 LNAA supplementation should include Tyr and Trp together with LNAAs that effectively reduce brain Ph
40 histidines containing tripeptides His(2-Ar)-Trp-His(2-Ar) exhibit potent antifungal activity against
41 n approach on Ac-Nle-c[Asp-His-D-Nal(2')-Arg-Trp-Lys]-NH2 (Ac-Nle(4)-c[Asp(5),D-Nal(2')(7),Lys(10)]-N
43 tide His-DPhe-Arg-Trp or tripeptide DPhe-Arg-Trp replaced the Arg-Phe-Phe sequence in the AGRP active
44 ist potency at the mMC4R, c[Pro-His-DPhe-Arg-Trp-Asn-Ala-Phe-DPro] and c[Pro-His-DPhe-Arg-Trp-Dap-Ala
45 Trp-Asn-Ala-Phe-DPro] and c[Pro-His-DPhe-Arg-Trp-Dap-Ala-DPro], and may be further developed to gener
47 sections of hydrophilic residues (Ser, Asn, Trp) tend to stay on or fall below the isotropic model t
50 analog probe 2,7-diaza-tryptophan ((2,7-aza)Trp), which exhibits unique water-catalyzed proton-trans
51 t measurable rates and that the analog 7-aza-Trp, which is expected to temper the nucleophilicity of
52 49), Tyr(189), Cys(192), and Tyr(196); beta2-Trp(57), Arg(81), and Phe(119)) may form the molecular b
53 ar dynamics studies revealed that ET between Trp(233) and Cys(222) is possible and likely to particip
54 acid with a spacer-free C-C linkage between Trp and a BODIPY fluorogen, which shows remarkable fluor
55 The most potent peptide 12f [His(2-biphenyl)-Trp-His(2-biphenyl)] displayed high in vitro activity ag
60 C-terminal catalytic domain (CAT), a central Trp-Gly-Arg (WGR) domain and an N-terminal region (NTR).
61 -lipid transfer for the aromatic side chains Trp, Tyr, and Phe as a function of depth in the membrane
62 exception of Glu-126 (helix IV), side chains Trp-151 (helix V), Glu-269 (helix VIII), Arg-144 (helix
64 he R-spine of RAF interacts with a conserved Trp residue in the vicinity of the NtA motif, connecting
65 trans isomerization about a highly conserved Trp-Pro imide bond in a region of the TAD that is requir
70 es quenching with three pairs of cytoplasmic Trp/fluorophore probes, indicating closing of cytoplasmi
71 hway-selective parathyroid hormone analog [d-Trp(12), Tyr(34)]bovine PTH(7-34) in six different murin
74 ichia coli lactose permease (the LacY double-Trp mutant Gly-46-->Trp/Gly-262-->Trp) with bound p-nitr
75 is enhanced) and can synthesize enantiopure Trp analogues substituted at the 4-, 5-, 6-, and 7-posit
76 We found that aromatic residues, especially Trp, and sulfur-containing residues at the i-2 position
79 synthesis of the fluorogenic amino acid Fmoc-Trp(C2-BODIPY)-OH (3-4 d), the preparation of the labele
80 phan (Trp)-based fluorogenic amino acid Fmoc-Trp(C2-BODIPY)-OH and its incorporation into peptides fo
82 human macrophages, which are auxotrophic for Trp and Phe, but is dispensable for growth within the Ac
84 c gradient in the transfer free energies for Trp and Tyr, where transfer was most favorable to the me
85 Tyr supplementation is higher than it is for Trp, and the relative effect of brain Phe reduction is h
86 is especially attractive because it can form Trp analogues directly from serine (Ser) and the corresp
87 he active site of TrCel7A is lined with four Trp residues with two of them, Trp-40 and Trp-38, in the
88 ces between fluorescence lifetimes of "free" Trp derivatives hydroxytryptophan (OH-Trp), N-formylkynu
90 between some key hydrophobic residues (e.g. Trp-64) and MoS2 surface also help to accelerate the pro
91 ctive peptides, Ile-Asn-Tyr-Trp, Leu-Asp-Gln-Trp, and Leu-Gln-Lys-Trp, and different bile salts in th
92 -aminomethylaniline-diglycolic acid-DPhe-Gln-Trp-Ala-Val-Gly-His-Leu-NHEt), showing excellent tumor l
93 Glu-Xaa8-Glu (double E) loop and the Met-Gln-Trp sequence of the canonical Thr-His-Trp (THW) loop kno
94 4-amino-1-carboxymethyl-piperidine-D-Phe-Gln-Trp-Ala-Val-Gly-His-Sta-Leu-NH2 ((68)Ga-RM2) is a synthe
95 4-amino-1-carboxymethyl-piperidine-d-Phe-Gln-Trp-Ala-Val-Gly-His-Sta-Leu-NH2 ((68)Ga-RM2) is a synthe
98 acY double-Trp mutant Gly-46-->Trp/Gly-262-->Trp) with bound p-nitrophenyl-alpha-d-galactopyranoside
99 ermease (the LacY double-Trp mutant Gly-46-->Trp/Gly-262-->Trp) with bound p-nitrophenyl-alpha-d-gala
100 rving as focal points of the left (harboring Trp(21) and Trp(25)) and right (harboring Trp(29)) ancho
102 spot residue Phe(279) Mutation of this HCDR3 Trp residue into any other residue except Tyr or Phe sig
103 down mainly into two fragments from Glp-His-Trp-Ser-Tyr-D-Ala-Leu-Arg-Pro-NHEt (LHRHa) to Trp-Ser-Ty
104 et-Gln-Trp sequence of the canonical Thr-His-Trp (THW) loop known to interact with the methyl-accepti
105 olved in Trp and Arg catabolism (IDO1, IDO2, Trp 2,3-dioxygenase [TDO], arginase [ARG] 1, ARG2, induc
106 can almost exclusively be attributed to Ile-Trp, the ACE inhibition by plant protein hydrolysates is
110 pression and activity of enzymes involved in Trp and Arg catabolism (IDO1, IDO2, Trp 2,3-dioxygenase
111 pression and activity of enzymes involved in Trp and Arg catabolism, as well as to investigate amino
113 oniae genes that were either rich or poor in Trp codons and found that Trp codon-rich transcripts wer
115 computationally the dynamical transitions in Trp-cage miniprotein powders, at three levels of hydrati
118 ft is accompanied by intrusion of water into Trp-cage's interior and the hydration of buried hydropho
124 ase of infection presented with elevated Kyn/Trp ratios, which further increased in untreated patient
126 n mechanism with selectivity toward D- and L-Trp as shown in voltammetric, photoluminescence and mole
128 omenon that occurs between photoexcited D-/L-Trp enantiomers and rGO/gamma-CD giving rise to an enant
130 cture also reveals an exo binding site for L-Trp, located ~42 A from the active site and formed by re
131 a)-l-tryptophanamide (FDTA), prepared from l-Trp, followed by LCMS analysis; all amino acids were fou
134 on of both 4-Me-5-NO2-L-Trp and 4-Me-7-NO2-L-Trp uncovered remarkable regio-promiscuity of nitration
135 his exo site may therefore provide a novel L-Trp-mediated regulation mechanism for cellular degradati
138 d II (ferryl) species, during oxidation of L-Trp, 1-methyl-L-Trp, and a number of other substrate ana
139 ) in a ternary complex with the substrates L-Trp and O2 and in a binary complex with the product N-fo
143 athway is the major route of L-tryptophan (L-Trp) catabolism in biology, leading ultimately to the fo
145 (ligand 5: H-Dmt-d-Ala-Gly-Phe(4-F)-Pro-Leu-Trp-NH-Bn(3',5'-(CF3)2)) exhibits balanced binding affin
146 , 5, and 7 (H-Tyr-d-Ala-Gly-Phe(4-F)-Pro-Leu-Trp-NH-Bn(3',5'-(CF3)2)) showed that their stability dep
147 ric interface within the dodecamer and a Lys-Trp-Lys triad at the center of the ring are important fo
148 sn-Tyr-Trp, Leu-Asp-Gln-Trp, and Leu-Gln-Lys-Trp, and different bile salts in the submicellar or mice
149 ered immunosensor was examined in monitoring Trp consumption and Kyn production in metastatic (Calu-6
150 nvolved operons or large genes with multiple Trp codons: downstream transcripts were less abundant af
151 mutagenesis of selected residues neighboring Trp-164 resulted in improved apparent second-order rate
153 e chemical nature of the non-tryptophan (non-Trp) fluorescence of porcine and human eye lens proteins
154 rexpressed and was shown to prenylate C-3 of Trp residues in both linear and cyclic peptides in vitro
156 that all other indole-substituted analogs of Trp undergo methylation at varying but measurable rates
157 ught to involve the sequential conversion of Trp to indole-3-pyruvic acid to IAA However, the pathway
158 tric immunosensor for in vitro evaluation of Trp consumption and Kyn production controlled by cancer
162 these PTMs to the fluorescence intensity of Trp, to determine semi-quantitatively their concentratio
163 netic data that confirmed the interaction of Trp(21) with the active site shielding C-terminal arm, s
165 the previous suggestion of an involvement of Trp-244, Tyr-248, and Pro-252 in proline binding is furt
168 we showed that the unmodified N1 position of Trp is important for turnover and that 1-thia-Trp and 1-
169 use of off-mechanism oxidation, primarily of Trp-321, and PxEDs stimulate KatG catalase activity by p
170 rpB is a powerful platform for production of Trp analogs and for further directed evolution to expand
176 ZnClTerp blocks the conformational switch of Trp-248 required for receptor activation, thereby explai
177 While the enantioselective synthesis of Trp analogues is often lengthy and requires the use of p
179 e energetics of low-temperature unfolding of Trp-cage comes from the hydration of hydrophilic residue
180 y profiles corresponding to the unfolding of Trp-cage miniprotein in the presence and absence of urea
183 "free" Trp derivatives hydroxytryptophan (OH-Trp), N-formylkynurenine (NFK), kynurenine (Kyn), hydrox
184 We show that the cumulative fraction of OH-Trp, NFK and ArgP emission dominates the total fluoresce
185 These data suggest that ribosome stalling on Trp codons causes a negative polar effect on downstream
186 ecular collapse of Tyr(93) in kringle-1 onto Trp(547) in the protease domain that obliterates access
187 > Ala in the X1 position, basic residues or Trp in the X2 position, and Pro >> Ala > Trp in the X3 p
189 ollowing electrochemical oxidation of Tyr or Trp results in a spirolactone moiety at the newly formed
190 u, Pro, Phe, or Tyr) and Asp-1028 (to Tyr or Trp) with larger side chains showed reduced degrees of b
194 of various planar (including aromatic (Phe, Trp, Tyr, and His)/amide (Asn and Gln)/Guanidine (Arg))
195 nsin II (UII, 1, H-Glu-Thr-Pro-Asp-c[Cys-Phe-Trp-Lys-Tyr-Cys]-Val-OH) fragment 4-11 were synthesized
197 ticular, the mu-agonist c[beta-Ala-d-Pro-Phe-Trp] 9 was shown to elicit potent antinociception in a m
198 acid substitutions (including His, Phe, Pro, Trp, and Tyr) support an enhanced viability during oxida
200 s are obtained for three different proteins (Trp-cage, myoglobin, and cytochrome c) with folding time
201 CLR selectivity for CGRP/AM in part by RAMP1 Trp-84 or RAMP2 Glu-101 contacting the distinct CGRP/AM
205 evolutionarily conserved tryptophan residue (Trp-73) of Y14 is critical for its binding to the mRNA c
207 A hydrophobic platform defined by residues Trp-711 and Trp-106, located in a highly mobile loop, ap
208 ne scanning of GpTx-1 revealed that residues Trp(29), Lys(31), and Phe(34) near the C-terminus are cr
210 crystal structure of an MTM analogue MTM SA-Trp bound to a DNA oligomer containing a site GGCC, and
212 first time, a FRET assay in PCa cells shows Trp-quenching due to Trp-NAD(P)H interactions, correlati
216 hat only three key amino acid substitutions (Trp --> Pro, Gly --> Ser and Arg --> Leu) are responsibl
217 ures of hIDO1 in complex with its substrate, Trp, an inhibitor, epacadostat, and/or an effector, indo
218 the evolution of cells capable of surviving Trp-->[3,2]Tpa substitutions in their proteomes in respo
219 g strong interactions with the toggle switch Trp 246(6.48), and delineated the structural response to
220 f the folded structure at high temperatures, Trp-cage cold denatures at 210 K into a compact, partial
223 t the earliest reaction time points and that Trp-321 is the preferred site of off-catalase protein ox
224 d biochemical approaches to demonstrate that Trp(136), located at the mouth of the VhChiP pore, plays
227 er rich or poor in Trp codons and found that Trp codon-rich transcripts were increased, whereas those
228 ochemical and cellular studies indicate that Trp binding at this exo site does not affect enzyme cata
230 in cell culture media, and could reveal that Trp consumption and Kyn production by highly metastatic
236 (ArgP) can be excited at the red edge of the Trp absorption band which allows normalisation of the em
237 rk suggests that coordinate targeting of the Trp catabolic enzymes tryptophan 2,3-dioxygenase (TDO) a
238 r molecules revealed in the proximity of the Trp residue have semiquantitative correlation with the o
239 ulfamides were inserted as surrogates of the Trp(7) and Lys(8) residues in the biologically relevant
241 variant was found to be more active than the Trp-325 form following induced expression in HEK293 cell
242 to understand this and hypothesized that the Trp codon content of a given gene would determine its tr
243 Liposome swelling assays confirmed that the Trp(136) mutations decreased the rate of bulk chitohexao
244 single channel recordings indicated that the Trp(136) mutations W136A, W136D, W136R, and W136F consid
247 fects of anionic lipids are mediated via the Trp(67)-Glu(71)-Asp(80) inactivation triad within the ch
248 ntrast to ZnBip, interacts directly with the Trp-248(VI:13/6.48) microswitch, contributing to its 8-f
249 ned with four Trp residues with two of them, Trp-40 and Trp-38, in the substrate binding sites near t
251 is, we subtly altered the properties of this Trp to reveal specific chemical interactions required fo
252 lying preparation and separation steps, this Trp-Kyn immunosensor offers an improved limit of detecti
256 ssay in PCa cells shows Trp-quenching due to Trp-NAD(P)H interactions, correlating energy transfer ef
257 activity, as measured by the ratio of Kyn to Trp, could be used to diagnose or predict active tubercu
258 rp-Ser-Tyr-D-Ala-Leu-Arg-Pro-NHEt (LHRHa) to Trp-Ser-Tyr-D-Ala-Leu-Arg-Pro-NHEt (fragment 1) and Ser-
259 how Chlamydia, a Trp auxotroph, responds to Trp starvation in the absence of a stringent response is
260 rates are accommodated mainly by stacking to Trp-105, explaining the production of neokestose and the
262 alyses revealed that tRNA(Met(CAU)) and tRNA(Trp(CCA)) are substrates for Cm formation, tRNA(Gln(UUG)
265 ma (IFN-gamma), which leads to a tryptophan (Trp)-limiting environment via induction of the enzyme in
266 Derivatives of the amino acid tryptophan (Trp) serve as precursors for the chemical and biological
267 uto-fluorescent NAD(P)H, FAD and tryptophan (Trp) lifetimes and their enzyme-bound fractions as marke
268 C-terminal to tyrosine (Tyr) and tryptophan (Trp) residues provides a potential alternative to enzyma
269 ar cation-pi interaction between tryptophan (Trp) and an amine cation are shown to absorb and fluores
270 ioxygenase (IDO), which degrades tryptophan (Trp) to kynurenine (Kyn), has been demonstrated to contr
273 ne (Kyn) as a main catabolite of tryptophan (Trp) degradation is involved in the immuno-editing proce
276 he intrinsic fluorescence of the tryptophan (Trp) and tyrosine (Tyr) amino acid residues present in t
277 small-molecule inhibitors of the tryptophan (Trp) catabolic enzyme indoleamine 2,3-dioxygenase (IDO)
278 describes the preparation of the tryptophan (Trp)-based fluorogenic amino acid Fmoc-Trp(C2-BODIPY)-OH
280 We also show that an active-site tryptophan, Trp-321, participates in off-pathway electron transfer.
285 n of oxidizable amino acids (i.e., Met, Tyr, Trp, His, Lys) and structure were observed during HOCl,
286 logues of the aromatic amino acids Phe, Tyr, Trp, and His within peptide medicinal chemistry are show
287 between milk bioactive peptides, Ile-Asn-Tyr-Trp, Leu-Asp-Gln-Trp, and Leu-Gln-Lys-Trp, and different
289 e difference in steric hindrance between Tyr/Trp(604) and the trifluoromethoxy moiety of NMS-P715, th
296 pH 7.5 vs delta = 67.6 ppm at pH 5.5, where Trp(peptide)-cryptophane interactions were evidenced by
297 of Gln, Tyr, and Lys at UAA and UAG, whereas Trp, Arg, and Cys were inserted at UGA, and the frequenc
298 ese data are consistent with a model whereby Trp-76 anchors the C terminus of the cytoplasmic tail of
299 id not reveal a significant association with Trp, Kyn, and Kyn/Trp in healthy and food-allergic cases
300 dicals was observed during the reaction with Trp or any molecule within a tested panel of Trp analogs
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