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1 ionally deleted from Xi in somatic cells (Xi(Xist)).
2 NOG, SOX2 and SSEA1 and lacked expression of Xist.
3 r of this process is the long non-coding RNA Xist.
4 tion 36 causes a significant derepression of Xist.
5 involved in the imprinting that silences Xm-Xist.
6 but is excluded from chromatin condensed by XIST.
7 maternal H3K27me3 as the imprinting mark of Xist.
8 mplex 2; second, Tsix enables PRDM14 to bind Xist.
9 ineage, for overlapping binding sites within Xist.
10 an mammals is mediated by the non-coding RNA Xist.
11 and the X-linked, X-inactivation transcript Xist.
12 nd in mice demonstrated robust regulation of XIST.
13 some silencing induced by the non-coding RNA Xist.
14 le mammals driven by the long noncoding RNA, Xist.
15 of the long noncoding RNAs HOTAIR, SRA, and Xist.
17 nactivation, and that YY1 binds directly the Xist 5' region to trigger the activity of the Xist promo
19 wn-regulated X-inactive specific transcript (XIST), a key player in X-chromosome inactivation that en
25 Xist antisense long non-coding RNA, XistAR (Xist Activating RNA), which is encoded within exon 1 of
29 on affects gene reactivation status along Xi(Xist), alters chromatin configuration and interferes wit
32 on of Tsix and PRC2 leads to derepression of Xist and in turn silencing of the single X chromosome in
35 tion (XCI) depends on the long noncoding RNA Xist and its recruitment of Polycomb Repressive Complex
36 nt changes the 3D structure of DNA, enabling Xist and its silencing proteins to spread across the X t
42 gulation of the lncRNA (long non-coding RNA) Xist and recruitment of specific chromatin modifiers.
44 , and consequently, enhanced accumulation of Xist and variable numbers of inactivated X chromosomes d
46 show that Tsix is dispensable for inhibiting Xist and X-inactivation in the early embryo and in cultu
47 mechanism involving antagonistic activity of XIST and XACT in controlling X chromosome activity in ea
48 ne or more X-inactivation escapees activates Xist and, separately, helps trigger X-linked gene silenc
49 in nuclear architecture (e.g., FIRRE, NEAT1, XIST, and others), the vast majority remain poorly under
52 ntify a mixed modality approach combining an Xist antisense oligonucleotide and a small-molecule inhi
55 ing (SHAPE-MaP) to examine these features of Xist at single-nucleotide resolution both in living cell
61 lyses have provided significant insight into Xist binding patterns and chromatin organization of the
63 silencing, we ectopically induced endogenous Xist by ablating the antisense repressor Tsix in mice.
66 C0T-1 RNA has several properties similar to XIST chromosomal RNA but is excluded from chromatin cond
67 x anchor domain of CIZ1 and the E repeats of Xist CIZ1-null mice, although viable, display fully pene
68 ges onwards show hallmarks of XCI, including Xist clouds and H3K27me3 foci, and have full embryogenic
76 ferentiation, and XCI of hESCs can be either XIST-dependent (class II) or XIST-independent (class III
78 successful reprogramming can occur from the XIST-dependent class II nuclear state but not class III
82 ring a paternally derived Xist mutation (X/X(Xist-)) die owing to failure of imprinted XCI and, presu
84 trophectodermal stem cells derived from X/X(Xist-) embryos completely reverse normal imprinted XCI p
86 embryonic day (E) 6.5, we find that the X/X(Xist-) ExE lacks the transcriptional regulator CDX2, a f
87 CIZ1 interacts with a specific region within Xist exon 7-namely, the highly repetitive Repeat E motif
88 ells contained two active X chromosomes with XIST expression and chromosome-wide transcriptional damp
89 s erosion of XCI is characterized by loss of XIST expression and foci of H3-K27-trimethylation, as we
90 Loss of maternal H3K27me3 induces maternal Xist expression and maternal XCI in preimplantation embr
91 and embryonic cells related to mono-allelic XIST expression and non-random X inactivation highlight
92 he Xi and a genetic circuitry that maintains XIST expression and X-chromosome inactivation in differe
97 how that 24 h after synchronous induction of Xist expression, acquired PRC2 binding sites map predomi
98 ce on the Xi during reprogramming, and, like Xist expression, is erased only after pluripotency genes
104 In female cells undergoing XCI de novo, Xist follows a two-step mechanism, initially targeting g
105 delled the process by inducing expression of XIST from nine different locations in human HT1080 cells
109 which is encoded within exon 1 of the mouse Xist gene and is transcribed only from the inactive X ch
113 oncoding X-inactivation-specific transcript (Xist gene) is responsible for mammalian X-chromosome dos
132 which expression of the long non-coding RNA XIST initiates the heterochromatinization and silencing
134 containing the conserved B and F repeats of Xist is critical for Jarid2 recruitment via its unique N
141 tions as an X inactivation master regulator; Xist is selectively upregulated from the prospective ina
142 sent as a maternal factor, maternal Xist (Xm-Xist) is repressed during preimplantation phases to esta
144 estigated the localization mechanisms of the Xist lncRNA during X-chromosome inactivation (XCI), a pa
148 t studies have improved our understanding of Xist localization and the proteins with which it interac
149 silencing and histone modifications but not Xist localization, and Drosophila Split ends homolog Spe
151 ive X is protected from silencing by its own Xist locus, and the possibility of different solutions f
158 male-specific embryo lethality and abrogates Xist-mediated gene repression, highlighting a key role f
159 actors include HnrnpK, which participates in Xist-mediated gene silencing and histone modifications b
160 ent Polycomb recruitment, in turn abrogating Xist-mediated gene silencing and reversing Xist-induced
164 nscription, SHARP and HDAC3 are required for Xist-mediated recruitment of the polycomb repressive com
165 ion whether Lamin B receptor is required for Xist-mediated silencing because they claim that our cell
166 a, and that this interaction is required for Xist-mediated silencing by recruiting the inactive X to
168 discuss recent advances in our knowledge of Xist-mediated silencing, focusing on Xist spreading, the
170 extensive efforts to define the mechanism of Xist-mediated transcriptional silencing, we still do not
174 n-coding RNA X-inactive specific transcript (XIST) mediates the transcriptional silencing of genes on
175 e maintenance phase, corresponding to 50-100 Xist molecules per Xi and contrasting with the chromosom
176 ntly, females harboring a paternally derived Xist mutation (X/X(Xist-)) die owing to failure of impri
182 idespread loss of Xi-associated H3K27me3 and XIST occurs in fused cells and precedes the bi-allelic e
183 f the long noncoding RNAs (lncRNAs) XACT and XIST on active X chromosomes in both early human pre-imp
189 ion embryos, that H3K9me3 is enriched at the Xist promoter region, preventing Xm-Xist activation by R
190 facilitate an increase in H3K27me3 over the Xist promoter, indicating that additional mechanisms exi
195 stripped off from the Xi in post-XCI cells, Xist recovers quickly within both gene-rich and gene-poo
196 , and the hemizygous (unpaired) state of the Xist region promotes its imprinting in the male germ lin
197 ed in a fundamental and conserved pathway of Xist regulation that ensures the asymmetric transcriptio
198 Xist 5' region before XCI competes with the Xist repressor REX1, whereas DNA methylation controls mo
200 itionally, artificial tethering of YTHDC1 to XIST rescues XIST-mediated silencing upon loss of m(6)A.
203 existing models for Polycomb recruitment by Xist RNA and establish precedence for H2AK119u1 in initi
204 n et al proposed that an interaction between Xist RNA and Lamin B receptor (LBR) is necessary and suf
206 ons argue against direct interaction between Xist RNA and PRC2 proteins and, as such, prompt a reappr
211 Here, we report that female mice lacking Xist RNA can, surprisingly, develop and survive to term.
212 f X(DeltaTsix)Y male cells displayed ectopic Xist RNA coating compared with X(DeltaTsix)X female cell
214 erlapping Xist RNA, leads to a deficiency in Xist RNA expression in cis during the initiation of X in
216 s an important intermediate between PRC2 and Xist RNA for the initial targeting of the PRC2 complex t
221 lycomb repressive complexes PRC1 and PRC2 by Xist RNA is an important paradigm for chromatin regulati
225 cordingly, synthetically tethering hnRNPK to Xist RNA lacking XR-PID is sufficient for Xist-dependent
226 oblast cells derived from CIZ1-null embryos, Xist RNA localization is disrupted, being highly dispers
227 a strong female bias, and observed different XIST RNA localization patterns, evidence of biallelic ex
228 d a more global view of Xist's function, how Xist RNA localizes to the inactive X chromosome (Xi) and
235 ale cells phenocopies one another in causing Xist RNA to delocalize from the Xi and disperse into the
236 hromosome inactivation (XCI) is triggered by Xist RNA to equalize gene expression between the sexes.
240 ion of XistAR, while sparing the overlapping Xist RNA, leads to a deficiency in Xist RNA expression i
242 ne a key pathway for Polycomb recruitment by Xist RNA, providing important insights into mechanisms o
243 XCI is initiated in cis by the noncoding Xist RNA, which coats the inactive X chromosome (Xi) fro
245 ckout and knockdown approaches, we find that Xist RNA-binding proteins, YY1 and hnRNPU, are critical
246 target loci in mESCs and is also involved in Xist RNA-mediated silencing, the latter suggesting a wid
252 xpression of X inactive-specific transcript (Xist) RNA during the earliest stages of X inactivation i
253 r regulator, X-inactive specific transcript (Xist) RNA, which localizes in cis along the entire lengt
255 proaches have provided a more global view of Xist's function, how Xist RNA localizes to the inactive
257 lly, XCR requires both DNA demethylation and Xist silencing, ensuring that only cells undergoing fait
258 ndreds of caRNAs, including previously known XIST, SNHG1, NEAT1, and MALAT1, as well as each caRNA's
261 edge of Xist-mediated silencing, focusing on Xist spreading, the nuclear organization of the inactive
264 two-step mechanism, but during maintenance, Xist spreads rapidly to both gene-rich and gene-poor reg
267 K36 methylase Setd2 leads to upregulation of Xist, suggesting H3K36me3 as a modification that contrib
268 dosage compensation can be achieved without Xist, supporting the idea of inherent genome balance.
269 smitted from a hemizygous father (+/Tg), the Xist Tg demonstrates paternal-specific expression in the
272 orially target factors in the interactome of Xist, the noncoding RNA responsible for X inactivation.
273 ing one X in both sexes from inactivation by XIST, the noncoding RNA that silences the inactive X.
275 en proteins that specifically associate with Xist, three of these proteins--SHARP, SAF-A and LBR--are
276 o the nuclear lamina and by doing so enables Xist to spread to actively transcribed genes across the
277 that CIZ1 has an essential role in anchoring Xist to the nuclear matrix in specific somatic lineages.
280 initiation of X-chromosome inactivation and XIST transcription in ES cells, also plays a role in mai
283 ence of colocalization both in the inducible Xist transgene ES cell line and in normal XX somatic cel
284 er nucleases, we inserted a large, inducible XIST transgene into the DYRK1A locus on chromosome 21, i
285 use of an ES cell line carrying an inducible Xist transgene located on mouse chromosome 17, we show t
287 ntified regions, both proximal and distal to Xist/Tsix, that contribute to the choice of which X chro
288 y exclusive binding between Cdx2 and Oct4 in Xist underlies the switch between imprinted and random X
290 P29, NNAT, PEG10, RTL1, IGF2, H19, MIM1, and XIST) were compared between embryos reaching the blastoc
291 (XCI) is initiated by the long noncoding RNA Xist, which coats the inactive X (Xi) and targets Polyco
292 CI is dependent upon the long non-coding RNA Xist, which is expressed from and coats the inactivated
294 t studies have established a requirement for Xist with inviability of female embryos that inherit an
295 ion pattern along the inactive X (Xi), after Xist (X-inactive specific transcript), a prototype long
297 vation of lymphocytes triggers the return of XIST/Xist RNA transcripts and some chromatin marks (H3K2
298 ive T and B cells have dispersed patterns of XIST/Xist RNA, and they lack the typical heterochromatic
299 iched with heterochromatic modifications and XIST/Xist RNA, which equalizes gene expression between t
300 IM is present as a maternal factor, maternal Xist (Xm-Xist) is repressed during preimplantation phase
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