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   1                                              YAC d792t2 restored senescence in both human and rat mam
     2                                              YAC DNA present in A9/YAC hybrids was further transferre
     3                                              YAC targeting technology (YTT) uses the WIBR/MIT-820 C57
     4                                              YACs mapped with respect to deletion breakpoints localiz
     5                                              YACs up to 670 kb can be efficiently circularized using 
     6 033 from our own data, and a total of 56,093 YACs, of which 44,401 are positive for more than one mar
     7 y high-resolution cytogenetics, FISH with 19 YACs, and PCR using 25 different sequence-tagged sites. 
  
  
  
  
  
  
  
  
    16 the previously constructed genetic map and a YAC-based physical map reported in a companion paper, th
  
  
    19  that contains elements needed to generate a YAC (cen4, ars, ura3, his, and two telomere segments) al
    20 ditional RAD52 gene that allow transfer of a YAC from any host into a recombination-deficient backgro
    21 malian DNA results in the establishment of a YAC that is able to propagate, segregate and be selected
  
  
    24 o identify gene sequences contained within a YAC by using cDNA representational difference analysis (
  
  
    27 pacing of approximately 300 kb and affording YAC coverage of approximately 92% of the mouse genome.  
  
  
  
    31 yr-Cys-amide (YC), acetyl-Tyr-Ala-Cys-amide (YAC), acetyl-Tyr-Ala-Ala-Cys-amide (YAAC), and acetyl-Ty
    32 ontig spanning this region was assembled and YAC clones retrofitted with a selectable marker (neo) we
    33 quencing of the gap regions, in both BAC and YAC forms, allowed us to generate a complete sequence of
  
  
  
  
    38 t age-dependent A beta deposition in the APP YAC transgenic model is dramatically altered depending o
  
  
  
    42  SBMA by crossing a highly representative AR YAC transgenic mouse model with 100 glutamines (AR100) a
  
  
    45 arkers used in construction of the human BAC/YAC physical map, including autosomal dominant nocturnal
  
  
    48 obin locus yeast artificial chromosome (beta-YAC) and analyzed globin gene expression during developm
  
    50 obin locus yeast artificial chromosome (beta-YAC) lines were produced in which the epsilon-globin gen
    51 obin locus yeast artificial chromosome (beta-YAC) mice, showing that the hereditary persistence of fe
    52 obin locus yeast artificial chromosome (beta-YAC) results in profound effects on globin gene expressi
    53 obin locus yeast artificial chromosome (beta-YAC) transgenic mice, but deletion of the 352-bp region 
    54 recipitation of fetal liver tissue from beta-YAC transgenic mice demonstrated that GATA-1, FOG-1, and
  
  
  
    58 relieves gamma-globin gene silencing in beta-YAC transgenic murine chemical inducer of dimerization h
    59 e upstream region that is absent in the beta-YAC construct might be involved in gamma-gene reactivati
  
  
  
    63  multiple repeats, most of the primary BRCA1 YAC isolates did not contain detectable deletions and co
    64 ther circular YACs, approximately 90kb BRCA1 YACs were efficiently and accurately retrofitted into ba
    65  analysis of transfectants showed that BRCA1 YACs isolated by a TAR cloning contained a functional ge
  
  
  
    69     We now show that in each of these cases, YAC clones found to contain a deletion breakpoint also c
    70 e isolated and mapped a single non-chimaeric YAC (17IA12, 260-280 kb) containing D6S193 and D6S297.  
    71  devised a new yeast artificial chromomosme (YAC)-based assay for chromosome breakage to analyze frag
  
    73 tion of ATIC to yeast artificial chromosome (YAC) 914E7 previously reported to span the 2q35 break in
  
    75 ded to obtain a yeast artificial chromosome (YAC) carrying the AR gene and introduce CAG repeat mutat
    76 y that a 320 kb yeast artificial chromosome (YAC) carrying the intact human CFTR gene can complement 
    77 1, containing a yeast artificial chromosome (YAC) cassette (a yeast selectable marker and a centromer
  
  
  
    81 ration of human yeast artificial chromosome (YAC) constructs encompassing the MJD1 locus into which e
  
  
  
    85 e we describe a yeast artificial chromosome (YAC) contig covering the distal part of the mouse X chro
    86 ll carcinoma, a yeast artificial chromosome (YAC) contig spanning the entire 3q26-27 region was const
    87 We have aligned yeast artificial chromosome (YAC) inserts in a contig spanning the interval between t
    88  a large-insert yeast artificial chromosome (YAC) library and then integrating the STS-content inform
    89 1 Mb fragmented yeast artificial chromosome (YAC) mapping to this region completely suppresses the tu
  
    91 d them within a yeast artificial chromosome (YAC) scaffold by observing the retention patterns of sha
    92 n from a 310 kb yeast artificial chromosome (YAC) that contains the entire CFTR gene with expression 
    93 ted from a 1-Mb yeast artificial chromosome (YAC) that was selected based on its size from among seve
    94  that a 271-kbp yeast artificial chromosome (YAC) transgene could fully complement the loss of Gata2 
    95 mice carrying a yeast-artificial chromosome (YAC) transgene that over-expresses normal human FMRP (KO
    96 ile X syndrome, yeast artificial chromosome (YAC) transgenic mice were generated in order to determin
  
    98 Here, we used a yeast artificial chromosome (YAC) transgenic mouse model of HD to investigate the con
  
  
   101  a 662-kb Gata3 yeast artificial chromosome (YAC), and these animals (termed G3YR mice) survived to a
   102 lity of using a yeast artificial chromosome (YAC)-based reporter gene construct to define these eleme
  
  
   105 ative yeast/bacterial artificial chromosome (YAC/BAC) library covering the candidate region using a t
   106 tification of a yeast artificial chromosome, YAC 927G4, that spans a translocation/duplication breakp
   107 ecules such as yeast artificial chromosomes (YACs) has an advantage over smaller constructs in that a
  
   109 ning different yeast artificial chromosomes (YACs) integrated into the same location in the genome pr
   110 4-based linear yeast artificial chromosomes (YACs) into circular chromosomes that can also be propaga
   111 ng a series of yeast artificial chromosomes (YACs) ordered in the CDR, and in five of eight cell line
  
   113 apped to three yeast artificial chromosomes (YACs) that contain human DNA from chromosome 6q26-27.   
  
   115 ibed to modify yeast artificial chromosomes (YACs) with cassettes that can be easily excised for embr
  
  
   118  described system for generation of circular YAC derivatives can facilitate sequencing as well as fun
   119 YAC inserts as a set of overlapping circular YAC/BACs, based on the use of an Alu-containing targetin
   120 -selection integration system, with circular YAC lipofection technology to achieve single copy target
  
  
   123  a method for purification of large circular YACs that is more reliable compared with previously desc
  
  
  
  
  
  
   130 (CHO-K1) cell clones were derived using each YAC to assess the role that luc copy number and the pres
  
   132 s and enzymatic digestion of matrix-embedded YAC DNA to produce a solution that can be injected.     
   133 and (iii) a conditional centromere, enabling YAC DNA to be amplified in culture in the presence of ga
   134 CG-repeats were identified within the entire YAC contig (not including FRA11B ), six of which map to 
  
  
  
  
   139 tromelia virus had elevated cytotoxicity for YAC-1 tumor cell targets compared with control animals. 
  
  
   142 rom our GAA repeat expansion-containing FRDA YAC transgenic mice reveal comparable epigenetic changes
   143 n, we have generated two lines of human FRDA YAC transgenic mice that contain GAA repeat expansions w
   144 ever, there is a difference between our FRDA YAC transgenic mice and other trinucleotide-repeat mouse
   145   Sequence comparison of STSs amplified from YAC clones uniquely mapped to BP2 or BP3 showed two diff
   146 n unique cDNA fragments were identified from YAC B30H3, which spans 330 kb in the human major histoco
   147  the establishment of two lines of human FXN YAC transgenic mice that contain unstable GAA repeat exp
   148  by crossbreeding of both lines of human FXN YAC transgenic mice with heterozygous Fxn knockout mice.
   149 3-directed lacZ expression of a 625-kb Gata3 YAC transgene in mice mimics endogenous Gata3 expression
  
   151 have generated an advanced second-generation YAC contig map of the mouse genome that doubles both the
  
   153 milar to what has been obtained using globin YACs or ligated cosmids, we conclude that (1) globin tra
  
   155 ss the 260-kb region encompassed by the half-YAC revealed the presence of EST sequence matches corres
  
  
  
   159  level of gene expression, we generated HCMV YACs containing a luciferase reporter gene inserted down
  
   161 The difference in the phenotype of the HPFH2/YAC transgenic mice and the humans with HPFH2 mutation s
   162 xpressed in the HPFH 2/beta locus YAC (HPFH2/YAC) transgenic mice in the early stage of development, 
  
  
  
   166 ration of an integrated somatic cell hybrid, YAC, and bacterial artificial chromosome contig spanning
   167 alyses of rodent-human somatic-cell hybrids, YAC contigs, and FISH of normal or rearranged chromosome
  
  
  
   171  This protocol details how to prepare intact YAC DNA for transgenesis of mice and involves separation
   172 ed sequence-based markers from an integrated YAC STS-content/somatic cell hybrid breakpoint physical 
   173 , and detailed examination of the integrated YAC transgenes allowed the general localization of a num
  
  
  
  
  
  
  
  
   182 iency was demonstrated by screening a 425 kb YAC known to contain the genes of four secretory or memb
   183  line derived by stable transfer of a 590-kb YAC (911D5) that expressed NPC1, the human gene responsi
  
   185 initive kidney development, and that a large YAC transgene faithfully recapitulated GATA-3 expression
  
  
   188  cassette was used to circularize two linear YACs containing genomic DNA from human chromosome 21.   
   189  gene was expressed in the HPFH 2/beta locus YAC (HPFH2/YAC) transgenic mice in the early stage of de
   190  much stricter basis, we produced beta locus YAC transgenic mice carrying an exact beta locus replica
   191 nd physical maps, human transcript gene map, YAC and PAC/BAC clone coverage, disease gene phenotype, 
   192   The combination of the BAC transcript map, YAC-to-BAC scaffold, and reference Human Genome Project 
   193 y (YTT) uses the WIBR/MIT-820 C57BL/6-mapped YAC library derived from the C57BL/6 mouse as the starti
  
  
  
  
   198 ved from an internal promoter in a multicopy YAC transgenic line results in a microphthalmia phenotyp
  
   200 tained within three overlapping, nonchimeric YAC clones using sequential fluorescent in situ hybridiz
  
   202 ured NK cytotoxicity in vivo by clearance of YAC-1 tumor cells from the lungs and by rejection of inc
  
  
  
   206 tem for comparing the bio-logical effects of YAC transgenes without the confounding influences of int
   207 somes comprising 220 kb at the distal end of YAC 927G4, which we have used as hybridization probes un
  
  
  
  
  
  
  
  
   216 r YAC counterparts, and (2) the retention of YAC vector sequences in a transgene probably has no sign
   217 nsgenesis of mice and involves separation of YAC DNA from yeast chromosomal DNA by pulsed field gel e
  
  
  
  
   222 ovide an efficient tool for stabilization of YACs and are useful for allowing additional recombinatio
  
  
   225 ene characteristic of the plasmid, cosmid or YAC constructs used for production of transgenic mice.  
   226 ess likely to rearrange than their cosmid or YAC counterparts, and (2) the retention of YAC vector se
  
   228 romeres using simultaneous FISH with ordered YAC probes and immunofluorescence with antibodies to CEN
  
   230 uction of correctly retrofitted, linear oriP YACs into human 293-EBNA cells by lipofection resulted i
  
  
  
  
   235 Etude du Polymorphisme Humain (CEPH) (Paris) YAC library with a degenerate alpha satellite probe.    
   236    We studied the developing cortex of PAX77 YAC transgenic mice carrying several copies of the human
   237     Typically, TAR cloning produces positive YAC recombinants at a frequency of approximately 0.5%; t
  
  
  
  
  
  
  
   245 ene-specific targeting hook, the recombinant YAC product carries two copies of the loop sequence, the
  
   247 egion, we then constructed a high-resolution YAC/BAC/STS/EST physical map based on experimental and d
  
  
  
  
  
  
  
   255  significantly enhanced against NK-sensitive YAC-1 cells and CL8-1 cells by rIL-18 administration to 
  
  
   258 elected based on its size from among several YACs identified by screening a randomly chosen subset of
  
  
  
   262 the Ods transgenic insertion or the Wt1-Sox9 YAC transgene overexpress the testis differentiation gen
   263      We examined the replication of a stable YAC containing a 240-kb insert of DNA from the human T-c
  
  
  
  
  
  
  
  
  
   273 ism was absent in knockout mice carrying the YAC transgene indicating functional rescue by the human 
  
  
  
  
   278 ng full-length and truncated versions of the YAC indicates the location and putative function of seve
  
  
   281 or, pLys2-neo, was developed to retrofit the YAC with the yeast lys2 gene, a selectable marker replac
  
  
  
  
   286     The correct function of the LCR when the YAC is first transferred into the L-cell environment rai
   287 d into yeast, the vector recombines with the YAC target sequences to form a circular molecule, retain
  
   289  Gata2 hematopoietic function but that these YAC-rescued Gata2 null mutant mice die perinatally due t
  
  
  
  
   294  artificial chromosomes (PACs) spanning this YAC clone, and two PACs produced 'split' signals suggest
  
  
  
  
  
   300  we first performed FISH on ASPS cases using YAC probes for OATL1 (Xp11.23) and OATL2 (Xp11.21), and 
   301 e were highly responsive to stimulation with YAC-1 cells such that CD27(-)CD11b(+) NK cells from CR m
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