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1 trated association of the IL-4 promoter with acetylated histone.
2 ivation, and resulted in increased levels of acetylated histones.
3 to active euchromatin structures containing acetylated histones.
4 by the limited availability of homogeneously acetylated histones.
5 ind that both are found at active genes with acetylated histones.
6 RNA genes on, in order to enrich the pool of acetylated histones.
7 or an increase in the ratio of methylated to acetylated histones.
8 and Bdf1, an SWR1 complex member that binds acetylated histones.
9 RD3 isoforms display differential binding to acetylated histones.
10 HDACIs, but not RA, induced accumulation of acetylated histones.
11 ed binding of the transcription activator or acetylated histones.
12 omatin formation, and decreased occupancy of acetylated histones.
13 bate and BETi blocked the binding of BRD4 to acetylated histones.
14 osomal DNA is dominant over interaction with acetylated histones.
15 coding regions and the incorporation of new acetylated histones.
16 egion (+665/+2068) in intron 1 enriched with acetylated histone 3 (H3) and H3 methylated at lysine 4,
17 and gp130 genes correlates with the level of acetylated histone 3 associated with the receptor promot
18 of NFkappaB p65 to and reduced the levels of acetylated histone 3 at promoters of monocyte chemotacti
19 BP at the MMP-9 promoter, inhibits levels of acetylated histone 3 at the MMP-9 promoter, and subseque
20 results in reduced Gcn5 occupancy, decreased acetylated histone 3 levels, lower globin and erythroid-
21 rait loci, disease-associated polymorphisms, acetylated histone 3 lysine 27 (H3K27ac) and transcripti
24 -methylated histone 3 lysine 4 (H3K4me3) and acetylated histone 3 lysine 9 (H3K9ac) at the HER2 promo
26 additional repressive histone modifications, acetylated histone 3 on lysine 9 and 14 deacetylation, a
28 y by sodium butyrate enhances recruitment of acetylated histone 3 to the IL-10 promoter and increases
29 I inhibitor etoposide induces association of acetylated histone 3 with the promoter of IRF-7 gene, in
30 22 alone minimally increased p21 (waf1) and acetylated histones 3 and 4 but caused dose-dependent in
31 d but only modestly increased p21 (waf1) and acetylated histones 3 and 4, suggesting that 17 selectiv
35 acterized by the absence of coactivators and acetylated histone 4, and the presence of corepressors a
37 ling-deficient plants have altered levels of acetylated histones after the UV-B treatment, demonstrat
38 thesis of a variety of proteins including an acetylated histone and a site-specifically modified mono
40 is unmethylated and the promoter region has acetylated histones and an accessible chromatin structur
42 gulator that localizes to DNA via binding to acetylated histones and controls the expression of thera
43 enetic signaling factors that associate with acetylated histones and facilitate transcription of targ
44 p65 phosphorylation, p300, and the levels of acetylated histones and H3-Me3K4, while enhancing the le
46 ited HDAC activity, there was an increase in acetylated histones and in p21(Cip1/Waf1), and chromatin
47 nal domain (BET) protein family, which binds acetylated histones and is a critical regulator of trans
48 of BRD4, a bromodomain protein that binds to acetylated histones and is a key transcriptional coactiv
50 eins are epigenetic "readers" that recognize acetylated histones and mark areas of the genome for tra
51 gulation remain obscure, although changes in acetylated histones and methylated CpG dinucleotides may
52 altered chromatin, marked by a depletion of acetylated histones and methylated histone 3-lysine 4 an
54 t with SFN in the diet resulted in levels of acetylated histones and p21(WAF1) in the ileum, colon, p
56 " proteins (BRD2, BRD3, BRD4, and BRDT) bind acetylated histones and serve as a scaffold for the recr
57 visualize the spatiotemporal distribution of acetylated histones and thus the tumor-selective pharmac
58 ctions both to suppress the incorporation of acetylated histones and to signal for the deacetylation
59 ks to chromatin functions that interact with acetylated histones, and proteins that participate in RN
60 the dissociation of the SWI/SNF complex from acetylated histones, and reduces its association with pr
61 two N-terminal bromodomains, which recognize acetylated histones, and the C-terminal protein-protein
62 romatin immunoprecipitation assays with anti-acetylated-histone antibodies revealed that unliganded T
65 mma3-Sgamma3-Cgamma3 locus demonstrated that acetylated histones are focused to the Igamma3 exon and
66 understanding of how bromodomains that bind acetylated histones are regulated, nor how the gene-spec
67 cetylated H4 decreases in late spermatids as acetylated histones are removed from the condensing nucl
68 vealed no significant change in the level of acetylated histones associated with the MMTV promoter fo
69 pitation analyses showed increased H3 and H4 acetylated histones at the core promoter in the presence
71 n spermatids revealed enrichment of BRD4 and acetylated histones at the promoters of active genes.
72 ant positive correlations between H3- and H4-acetylated histones, BET protein-binding sites and MLV-i
73 Here we report the structural mechanism of acetylated histone binding by the double PHD fingers of
75 this promoter region becomes associated with acetylated histones by chromatin immunoprecipitation ass
76 used to compare deacetylation of chemically acetylated histones by the yeast sirtuins, Sir2 and Hst2
77 rotein interactions between bromodomains and acetylated histones can be antagonized by selective smal
78 s indicate that Brd4 specifically recognizes acetylated histone codes, and this recognition is passed
79 etylase inhibitor valproate, which increases acetylated histone content in cortical GABAergic interne
82 e level of enrichment of VHS107 genes in the acetylated histone fractions as assayed by chromatin imm
83 end towards a dose-dependent accumulation of acetylated histones from 200 to 600 mg of oral SAHA.
86 lel to nuclear accumulation of cytochrome c, acetylated histone H2A, but not unmodified H2A, was rele
87 SAHA treatment caused an accumulation of acetylated histones (H2B, H3, and H4), an increase of p2
88 occupancy by RNA polymerase II (RNA pol II), acetylated histone H3 (Ac-H3), and acetylated histone H4
90 ere significant cocaine-induced increases in acetylated histone H3 (AcH3) and phospho-cAMP response e
92 racts with mitotic chromosomes by binding to acetylated histone H3 and H4 and is thought to play a ro
93 nes were associated with a moderate level of acetylated histone H3 and H4 and trimethylated histone H
95 itation, we show that the levels of multiply acetylated histone H3 and H4 in chromatin are decreased
96 tein 2 (MeCP2) and increased the bindings of acetylated histone H3 and H4 in the cyclin A promoter.
101 ia markedly reduced global levels of CBP and acetylated histone H3 and increased the expression of hi
102 tic genes is correlated with the presence of acetylated histone H3 and phosphorylated RNA polymerase
105 ells treated with 8-bromo-cAMP had increased acetylated histone H3 associated with the proximal (but
106 rified the increased enrichment of lysine-27 acetylated histone H3 at discrete loci, accompanied by e
107 marks (dimethylated histone H3 at lysine 4, acetylated histone H3 at lysine 14, and acetylated H4) a
108 e significantly increased the association of acetylated histone H3 at lysine 9 with the SRE-containin
109 and WRKY53 in P(1) plants are enriched with acetylated histone H3 at lysine 9, a chromatin mark asso
110 -induced c-Fos was co-localized with phospho-acetylated histone H3 in a majority of c-Fos-positive ce
111 higher levels of the permissive histone mark acetylated histone H3 in both the human and mouse IL10 l
112 s directly to histones, reduces the level of acetylated histone H3 in cultured cells and inhibits ace
114 lowed by a persistent increase, in levels of acetylated histone H3 in the nucleus accumbens, an impor
115 scence microscopy to show that immunostained acetylated histone H3 is relatively absent from peri-cen
116 association of active RNA polymerase II and acetylated histone H3 just upstream of Mef2c exon 4, pro
119 deposition of histone H2B on preexisting non-acetylated histone H3 Lys(56) at GAL1 in Deltartt109 is
121 structure alteration, targeting reduction of acetylated histone H3 lysine 9 and increased dimethylate
122 apping of translocation breakpoints using an acetylated histone H3 lysine 9 chromatin immunoprecipita
123 Through evaluation of genes associated with acetylated histone H3 marks, and global expression analy
130 that on the myosin VI promoter, the level of acetylated histone H3 was markedly decreased, whereas th
133 ), and there was an increased association of acetylated histone H3 with Bdnf promoters in only the ma
136 of Pre-Ac CD4(+) T cells, whereas increased acetylated histone H3 with no change in total H3 was obs
137 expression through increased association of acetylated histone H3 with the CK2alpha gene promoter.
138 ling process characterized by an increase in acetylated histone H3 within a 968-bp region 5' of the A
139 on in leukemic cells, with reduced levels of acetylated histone H3 within the MYC gene associated wit
140 ation to the nucleus and colocalization with acetylated histone H3, a hallmark of active transcriptio
142 quencing analyses revealed that ENL binds to acetylated histone H3, and co-localizes with H3K27ac and
143 ociated with NFAT and GATA4, as well as with acetylated histone H3, following agonist stimulation.
144 , Patz1(+/-) MEFs displayed higher levels of acetylated histone H3, H3K4me2, H3K4me3, H3K36me3 and lo
150 ells and mediates incorporation of lysine 56 acetylated histone H3.3 (H3acK56) at the chromatin domai
151 substrate with preferential activity toward acetylated histone H3; mutagenesis of the catalytic doma
154 ifferent: over P1, histone activation marks (acetylated histones H3 and H4 and H3 trimethylated at K4
156 SF1 physically interacts with amino-terminal acetylated histones H3 and H4 and with acetyltransferase
157 pitation assays of the H4/n gene reveal that acetylated histones H3 and H4 are maintained at the same
158 of activated RNA polymerase II (pol II) and acetylated histones H3 and H4 at the ifngr1 promoter and
159 lly immunoprecipitated by antibodies against acetylated histones H3 and H4 in shear-stressed but not
160 associated with an increased accumulation of acetylated histones H3 and H4 in total cellular chromati
162 istribution of Fs(1)h-S and various forms of acetylated histones H3 and H4 suggest a preference for b
166 oprecipitation assays revealed enrichment of acetylated histones H3 and H4, and H3 di- and tri-methyl
167 p in cultured cells reduces the level of the acetylated histones H3 and H4, and this reduction can be
168 IL-12 stimulation and transiently increases acetylated histones H3 and H4, patterns of histone acety
169 thylated regulatory regions and excludes the acetylated histones H3 and H4, resulting in a localized
170 munoblots revealed a concomitant increase in acetylated histones H3 and H4, which returned to control
171 cluding H3 di- and trimethylated at Lys4 and acetylated histones H3 and H4, while their silent counte
175 oid receptor coactivator proteins (SRC), and acetylated histones H3/H4 (AcH) at estrogen-regulated pr
176 of HDACs and HATs, responsible for decreased acetylated histone-H3 and -H4, and increased HDAC activi
177 ion of class I HDAC protein, accumulation of acetylated histone-H3 in total cellular chromatin, resul
179 he Kcc2 promoter, and decrease in binding of acetylated histone H3K9 surrounding the transcriptional
180 pol II), acetylated histone H3 (Ac-H3), and acetylated histone H4 (Ac-H4) but did not significantly
183 (ChIP) assay showed increased association of acetylated histone H4 and lysine 9 (K9)-acetyl H3 with t
184 H4 dimethylated at lysine (K) 20, and N-term acetylated histone H4 dimethylated at K20 and acetylated
185 g these, two peaks were identified as N-term acetylated histone H4 dimethylated at lysine (K) 20, and
186 panied by relocation of the MSL proteins and acetylated histone H4 from the X chromosome to autosomal
188 genomic deposition of MacroH2A, H3TrimK9 and acetylated histone H4 modifications on the Xi at higher
189 n revealed that METH decreased enrichment of acetylated histone H4 on GluA1, GluA2, and GluN1 promote
190 m molecular dynamics simulations of a doubly acetylated histone H4 peptide bound to the bromodomain o
195 cooperate to ensure that only appropriately acetylated histone H4 proteins are imported into the nuc
196 comparison, the acetyl transferase p300 and acetylated histone H4 remain localized with DNA througho
197 ted that these sequences are associated with acetylated histone H4 specifically in endothelial cells.
199 s been linked to Bdf1, which binds TFIID and acetylated histone H4 tails, but no linkage between TAF1
200 tin immunoprecipitation with an antibody for acetylated histone H4 that discriminates between constit
202 in the association of TbetaRII promoter with acetylated histone H4 was detected in the TSA-treated ce
203 markedly decreased, whereas that of p53 and acetylated histone H4 was slightly increased in MCF7 cel
204 ctively expressed, whereas genes depleted in acetylated histone H4 were non-transcribed or expressed
206 o the VWF promoter, increased association of acetylated histone H4 with the VWF promoter and subseque
208 specifically increased levels of endogenous acetylated histone H4, but not histone H3, strongly sugg
215 l (BET) proteins are epigenetic "readers" of acetylated histones in chromatin and have been identifie
216 pecific primers indicated an accumulation of acetylated histones in chromatin associated with the RI
217 ing proteins recognize different patterns of acetylated histones in intact nuclei of living cells.
218 e further show that the MIEP associates with acetylated histones in permissive cells, and that in per
219 or, trichostatin A, rescued the reduction of acetylated histones in the CBP cKO cortex but failed to
220 inistration in mice, CSP-TTK21 significantly acetylated histones in the hippocampus and frontal corte
221 ve effect of HDAC evident in the presence of acetylated histones in the immediate-early promoter regi
222 Apc(min) mice, and there was an increase in acetylated histones in the polyps, including acetylated
223 there were only modest changes in levels of acetylated histones in the skin of ODC transgenic mice.
224 es the Adipoq gene by recruiting P-TEFb onto acetylated histones in the transcribed region of the gen
227 TAF(II)250 and PCAF recognized H3 and other acetylated histones, indicating fine specificity of hist
228 genome, whereas most CGBP co-localizes with acetylated histones, indicating that CGBP is localized t
229 oth HSS-9 and HSS+3 inducibly associate with acetylated histones, indicative of chromatin remodeling,
230 fashion, selective disruption of bromodomain:acetylated histone interactions with chemical probes ser
231 dues in histone H3 enables deposition of pre-acetylated histones into cellular chromatin, via a pathw
232 ns contain two bromodomains whose binding to acetylated histones is required for the blockade of diff
233 modomain protein capable of interacting with acetylated histones, is implicated in transmitting epige
235 tive chromatin within the promoter; that is, acetylated histone K9/K14 and histone H4K5 as well as tr
236 nd their recruitment to the SHP promoter and acetylated histone levels at the promoter were increased
238 f p300 by siRNA decreased acetylated FXR and acetylated histone levels, and occupancy of FXR at the p
239 monstrates that despite no change in overall acetylated histone levels, histone H3 is hypo-acetylated
240 ecialized binding modules that interact with acetylated histones, linking chromatin recognition to ge
242 teins (BET) are chromatin adapters that bind acetylated histone marks via two tandem BDs, BD1 and BD2
243 ET proteins to chromatin by engaging cognate acetylated histone marks, and the extraterminal (ET) dom
244 ower Sirt1 abundance and activity, increased acetylated histone modifications and Sirt7 levels, and N
246 t indicating that SEC recruitment to certain acetylated histones on a subset of genes stimulates the
248 In contrast, we found that the extent of acetylated histones on the p21 promoter, especially the
250 of deacetylase activity, assayed using mixed acetylated histones or acetylated histone H4 peptide.
251 malignant T cell apoptosis and modulation of acetylated histones, p21(WAF1), bax, Stat6, and caspase-
252 1 alters the direct association of BRD4 with acetylated histone-packaged promoters and reduces the tr
253 ound, I-BET-762, that inhibits binding of an acetylated histone peptide to proteins of the bromodomai
254 minal fragment of Brd4 binds to both DNA and acetylated histone peptides, allowing it to bind tightly
256 rom PBMNCs showed consistent accumulation of acetylated histones post-therapy, and enzyme-linked immu
257 nucleosomal arrays reconstituted with highly acetylated histones prepared from butyrate-treated HeLa
258 the interaction between its YEATS domain and acetylated histones reduces the ATAC complex-dependent p
260 nal domain-containing proteins (Brd) bind to acetylated histone residues, resulting in recruitment of
261 ith transcription factors and recognition of acetylated histone residues, the chromatin remodeling ac
265 unoblotting with specific antibodies against acetylated histones shows that Alp5 is required for hist
266 acetylated histones in the polyps, including acetylated histones specifically associated with the pro
267 s that 'read' chromatin states by binding to acetylated histones strongly suppresses osteoclastogenes
270 d SNRPN expression, but not association with acetylated histones, suggesting that histone acetylation
271 fer resistance to the drug map to the likely acetylated histone tail binding domain of the protein.
273 sessed SIRT6 enzymatic activity on synthetic acetylated histone tails (H3K9Ac) by measuring products
274 rs controlling transcription through reading acetylated histone tails and recruiting transcription co
275 BD1 mutants and analyzed their affinities to acetylated histone tails and to the BET inhibitor JQ1 us
276 ate, suggesting that domains recognizing the acetylated histone tails reside at the interface between
279 Since the BET proteins are known to bind acetylated histone tails, these results also suggest a r
283 tibody reveal that this aptamer binds to the acetylated histone target with similar affinity to a com
284 -forward loops of acetylation and binding of acetylated histones that drive transcription of underlyi
285 ondensin II chromatin remodelling complex to acetylated histones through bromodomain interactions.
287 ncreased P-Rex1 promoter activity and caused acetylated histones to accumulate and associate with the
290 protein that has been shown to interact with acetylated histones to regulate transcription by recruit
294 T) proteins, inhibiting them from binding to acetylated histones, which occurs preferentially at supe
295 inhibitor treatment increases association of acetylated histones with downregulated genes and correct
296 Lsh resulted in an increased association of acetylated histones with repeat sequences and transcript
297 In support of this, increased association of acetylated histones with the promoter loci of granzyme B
298 ur finding of allele-specific association of acetylated histones with the SNRPN exon 1 region, which
299 ved to be reasonably specific at recognizing acetylated histones, with recognition efficiencies of 60
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