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1 arenosa genomes that are homeologous in the allotetraploid.
2 ciated with homoeolog-expression bias in the allotetraploids.
3 with hypermethylation of this region in the allotetraploids.
4 ecific hybrids are largely maintained in the allotetraploids.
5 l region containing the MIR172b locus in the allotetraploids.
6 versity in genetically tractable Arabidopsis allotetraploids.
7 cting repressor(s) present in A. arenosa and allotetraploids.
8 ata in A. thaliana, Arabidopsis arenosa, and allotetraploids.
9 s of homeolog expression in synthetic (S(1)) allotetraploids.
10 in A. arenosa and repressed in resynthesized allotetraploids.
11 iomass heterosis in interspecific hybrids or allotetraploids.
12 ge expression between progenitors and in the allotetraploids.
13 iana than in A. arenosa in the resynthesized allotetraploids.
15 segregating in a cross between cultivars of allotetraploid (AADD) Gossypium hirsutum ("Upland" cotto
16 rity of nonadditively expressed genes in the allotetraploids also display expression changes between
19 s were mapped in three diploids and in three allotetraploids (amphidiploids) and one allohexaploid sp
20 icultural crops, the cultivated cotton is an allotetraploid and has a large genome ( 2.5 gigabase pai
21 ris, a widespread ruderal plant, is a recent allotetraploid and, thus, is an ideal model organism for
22 chlorophyll and starch metabolic pathways in allotetraploids and F(1) hybrids, which produced more ch
26 genus Glycine species (three recently formed allotetraploids and their four diploid progenitors) to d
27 in leaves of Arabidopsis autopolyploids and allotetraploids and their progenitors using isobaric tag
28 l regulation of a miR163-mediated pathway in allotetraploids and their progenitors, Arabidopsis thali
31 ating from the mid-parent value, MPV) in the allotetraploids and triggered unequal degradation of A.
32 evolution in Nicotiana tabacum (tobacco), an allotetraploid, and its diploid relatives, and show GRDs
33 econd scenario assumes that the ancestor was allotetraploid, and suggests that the duplication is you
34 transcriptionally repressed in resynthesized allotetraploids, and a subset of A. thaliana loci includ
35 iana At2g23810 remained in the resynthesized allotetraploids, and the methylation spread within the p
36 thaliana and Arabidopsis arenosa, a natural allotetraploid Arabidopsis suecica, and two resynthesize
40 isplay morphological vigour, and Arabidopsis allotetraploids are larger than the parents Arabidopsis
41 of the nonadditively expressed genes in the allotetraploids are repressed, and >94% of the repressed
43 ural populations of independent origin; this allotetraploid arose ~80 years ago via hybridization bet
46 However, examining chromosome pairing in the allotetraploid Brassica napus has been hampered by the l
47 genome relationships for the six diploid and allotetraploid Brassica species, probably because member
49 d somatic cytogenetic mosaics in Arabidopsis allotetraploids, but it is unclear whether this phenomen
51 d 5-aza-2'-deoxycytidine-treated parents and allotetraploids by amplified fragment length polymorphis
52 the combination of two divergent genomes in allotetraploids by interspecific hybridization induces g
53 tudy suggests that hybrid speciation between allotetraploids can occur without an intermediate stage
54 re analyzed and compared: both subgenomes of allotetraploid Coffea arabica (contributed by the diploi
56 formatically distinguish duplicated genes in allotetraploid cotton and assign them to either the A or
57 d to the 12th homoeologous chromosome set of allotetraploid cotton cultivars, associated with quantit
59 lified for generating DNA level mutations on allotetraploid cotton genome with high-efficiency and hi
63 rs is small in polyploid crop plants such as allotetraploid cotton that has A- and D-sub-genomes.
64 ng in a newly created and genomically stable allotetraploid cotton, of genotype AAGG, using an AFLP-c
66 ntially methylated cytosines in domesticated allotetraploid cottons and their tetraploid and diploid
67 f the evolution and domestication history of allotetraploid cottons based on the whole genomic variat
71 RM1 retrotransposon subfamily in the ancient allotetraploid crop plant corn is linked to the repeated
72 Brassica napus (AACC), a young polyphyletic allotetraploid crop species with closely related homoeol
73 of A. thaliana-lyrata hybrids and their neo-allotetraploid derivatives and in the pollen of C. rubel
74 etraploid lines and in A. suecica, a natural allotetraploid derived from A. thaliana and A. arenosa,
75 us genes silenced in Arabidopsis suecica, an allotetraploid derived from Arabidopsis thaliana and Car
76 hypotheses using Brassica napus (canola), an allotetraploid derived from B. rapa and B. oleracea in w
77 ect white clover's evolutionary origin as an allotetraploid derived from cyanogenic and acyanogenic d
78 e selectively enriched in G. hirsutum L., an allotetraploid derived from polyploidization between AA
80 Tobacco (Nicotiana tabacum L.) is a natural allotetraploid derived from the interspecific hybridizat
83 PARF sequences from diploid cottons and from allotetraploid G. hirsutum agree with a previous observa
85 first pair of homoeologous chromosomes of an allotetraploid genome in which BAC contigs were identifi
89 ers have successfully differentiated the two allotetraploid genomes (AD1 and AD2) when tested in pare
90 eloping integrated genomic tools for complex allotetraploid genomes, like that of cotton, is highly e
91 haring of alleles between the two cultivated allotetraploid genomes, with a few exceptions that indic
92 ly formed ( approximately 100,000 years ago) allotetraploid (Glycine dolichocarpa) closely related to
93 ism, was higher in a recently formed natural allotetraploid (Glycine dolichocarpa, designated 'T2') t
100 o co-resident genomes (A(T) and D(T)) of the allotetraploid, Gossypium hirsutum, as well as the model
101 onsistent with the hypothesis that synthetic allotetraploids have compromised mechanisms of epigeneti
102 nduced silencing in Arabidopsis suecica, the allotetraploid hybrid of A. thaliana and Arabidopsis are
103 For instance, in Arabidopsis suecica, the allotetraploid hybrid of Arabidopsis thaliana and Arabid
104 on and frequent univalents, but is normal in allotetraploid hybrids, indicating the genomes are homeo
107 C loci are maintained in natural Arabidopsis allotetraploids, leading to extremely late flowering.
108 d Arabidopsis suecica, and two resynthesized allotetraploid lines (F(1) and F(7)) derived from A. tha
109 d in autotetraploid and multiple independent allotetraploid lines and in A. suecica, a natural allote
112 ssed, and >94% of the repressed genes in the allotetraploids match the genes that are expressed at hi
115 nd compare it with T. miscellus, which is an allotetraploid of similar age (~40 generations old).
118 lopolyploidy because half of the species are allotetraploids of different ages, allowing us to examin
122 ZmMyb-IF25 are associated with the segmental allotetraploid origin of the maize genome, other gene du
126 olyploids and parents are also complex, with allotetraploid populations being disjunct from one or bo
127 .3 and 8.2%) in F(1)- and F(8)-resynthesized allotetraploids relative to mid-parent values, respectiv
128 including many miRNA targets in Arabidopsis allotetraploids relative to the parents Arabidopsis thal
129 ates with phenotypic novelty, and, unlike in allotetraploids, remains a major genomic destabilizing f
131 a arabica L.) is a self-compatible perennial allotetraploid species (2n=4x=44), whereas Robusta coffe
134 sions of the three diploid and three derived allotetraploid species of Brassica in the triangle of U.
137 onstraint to increasing productivity in this allotetraploid species, accounting for losses of approxi
138 s, is a homoploid hybrid species between two allotetraploid species, Paeonia peregrina and a member o
139 ciently in A. thaliana than in resynthesized allotetraploids, suggesting a role of posttranscriptiona
140 (MPV) in two independently derived synthetic allotetraploids, suggesting nonadditive gene regulation
141 etic analyses of multiple populations of the allotetraploid T. castellanus (2n = 24) and its putative
143 CNG DNA methylation of K7 was less in the allotetraploids than in the parents, and the element var
145 rmed populations of Tragopogon miscellus, an allotetraploid that formed repeatedly within the last 80
147 recently emerged (within the last 80 years) allotetraploid Tragopogon mirus (2n=24), formed from the
148 es in a polyploid, the mating systems of the allotetraploid Tragopogon mirus and one of its diploid p
150 two natural populations of 40-generation-old allotetraploid Tragopogon miscellus (Asteraceae) plants.
151 oeologues in five natural populations of the allotetraploid Tragopogon miscellus that arose within th
153 expression analysis of Arabidopsis synthetic allotetraploids, using spotted 70-mer oligo-gene microar
154 y expressed in the resynthesized and natural allotetraploids was significantly higher than that of si
155 roximately 5% of the duplicated genes in the allotetraploid were inferred to have been silenced or do
156 lated proteins (61-62%) in the F(1) and F(8) allotetraploids were also differentially expressed betwe
157 h this notion, pri-miR172 transcripts in the allotetraploids were primarily derived from the A. thali
159 Cultivated peanut (Arachis hypogaea) is an allotetraploid with closely related subgenomes of a tota
160 quent speciation in Repandae has resulted in allotetraploids with divergent genome sizes, including N
161 closely related species are represented: the allotetraploid Xenopus laevis that is widely used for mi
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