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1 inct active site structures to catalyze tRNA aminoacylation.
2 zing the bound charging amino acid following aminoacylation.
3 ction, requires accurate transfer RNA (tRNA) aminoacylation.
4 had the same two complementary modes of tRNA aminoacylation.
5 , which is distinct from the active site for aminoacylation.
6 hmtRNA(Met), which significantly reduces its aminoacylation.
7 tion and is intrinsic to the active site for aminoacylation.
8 nd regulation molecules for functions beyond aminoacylation.
9 the same structural determinants as used for aminoacylation.
10 and is directly responsible for proper tRNA aminoacylation.
11 (m1)G37 in the anticodon loop for efficient aminoacylation.
12 rved overall accuracy of DNA replication and aminoacylation.
13 rid system and to measure in vitro tRNA(Pyl) aminoacylation.
14 by most leucyl-tRNA synthetases (LeuRS) for aminoacylation.
15 mechanisms ensuring the selectivity of tRNA aminoacylation.
16 RNA during amino acid activation and/or tRNA aminoacylation.
17 r thermautotrophicus that enhances tRNA(Pro) aminoacylation.
18 eptide is not important for the kcat of tRNA aminoacylation.
19 xisting tRNA(Val(AAC)) accompanied by its de-aminoacylation.
20 id recognition but less efficient in cognate aminoacylation.
21 re delayed relative to the loss of G(-1) and aminoacylation.
22 e tRNA(Phe), which did undergo transport and aminoacylation.
23 olyzed by pyrophosphatase to drive efficient aminoacylation.
24 the 3' terminal CCA nucleotides required for aminoacylation.
25 catalytic efficiency and specificity of tRNA aminoacylation.
26 A at their 3'-ends, representing the site of aminoacylation.
27 is highly sensitive to the kinetics of tRNA aminoacylation.
28 to tyrosine, and significantly reduces tRNA aminoacylation.
29 ted with RNA and thioester cofactor-mediated aminoacylation.
30 ate amino acids that are misactivated during aminoacylation.
31 near the active center of GltX and inhibits aminoacylation, a unique example of an aminoacyl-tRNA sy
32 LeuRS) is a class I enzyme, which houses its aminoacylation active site in a canonical core that is d
33 site is located approximately 30 A from the aminoacylation active site in the canonical core of the
35 o MST1 induces conformational changes in the aminoacylation active site, and it positions a potential
40 tion of dimeric T1 into monomers deprived of aminoacylation activity and simultaneous induction of T2
41 ants S57C and N280S both displayed wild-type aminoacylation activity and stability with respect to th
42 ses TyrRS(Mini), which not only has the same aminoacylation activity as native TyrRS but also has str
44 207A) remained cytosolic and maintained full aminoacylation activity but failed to rescue infectivity
47 owever, previous studies showed that loss of aminoacylation activity is not required to cause CMT.
49 ltered highly conserved amino acids, and the aminoacylation activity of QARS was significantly impair
52 gative effect of the p.His257Arg mutation on aminoacylation activity of TrpRS, which subsequently com
53 ctions in protein synthesis: in the MSC, its aminoacylation activity supports global translation, but
54 east mitochondrial LeuRS has compromised its aminoacylation activity to some extent and adapted its C
57 y is rooted in an ancient adaptation for its aminoacylation activity, these results suggest that the
63 cRNAs could implement all the steps for auto-aminoacylation: amino acid coordination, intermediate ac
64 yzing aminoacyl-adenylate formation and tRNA aminoacylation and a second editing or proofreading site
65 These results suggest a regulatory role for aminoacylation and abortion during stress, and our study
67 ic C-terminal domain in tRNA recognition for aminoacylation and amino acid editing has adapted differ
71 minal domain as LeuRS transitions between an aminoacylation and editing complex or, in the case of ye
73 he function of independent but collaborative aminoacylation and editing domains of alanyl-tRNA synthe
76 TP is utilized in protein synthesis via tRNA aminoacylation and guanosine triphosphate regeneration.
79 two sites: one for amino acid activation and aminoacylation and one for editing misactivated amino ac
80 ion so that, remarkably, two motifs (one for aminoacylation and one for editing) in the same enzyme i
81 ssignment of protein domains associated with aminoacylation and phosphate binding, the HisZ-HisG octa
83 platform for the synthesis by enzymatic tRNA aminoacylation and ribosomal translation of cyclic pepti
84 e A3243G mutation improved the efficiency of aminoacylation and stability of mitochondrial tRNAs and
85 e significant decreases in the efficiency of aminoacylation and steady-state level of mt-tRNA(Asp) in
86 lting from the historical study of tRNA(Cys) aminoacylation and the integrative perspective of sequen
87 tion domains had catalytic functions for the aminoacylation and the molecular switch-driven transport
90 ispairs are significantly more important for aminoacylation and translation than previously realized.
96 for amino acid, ATP and tRNA associated with aminoacylation, and a fourth 'orthogonal' subsite create
97 ia tyrosyl-tRNA synthetase (LdTyrRS) namely, aminoacylation, and as a mimic of host CXC chemokine.
98 two sites lead to rigorous accuracy in tRNA aminoacylation, and both activities are essential to Leu
99 taB2 showed comparable kinetics for in vitro aminoacylation, and both enzymes complemented a defect i
100 own is not attributable to altered tRNA(Gly) aminoacylation, and cannot be rescued by Drosophila Gars
101 both CysRS and tRNA(Cys) for efficient tRNA aminoacylation, and highlight the energetic costs of con
102 ctive site titration, amino acid activation, aminoacylation, and posttransfer editing (deacylation).
104 structure and creates a better substrate for aminoacylation, and thus the UPD and TLS are functionall
108 lthough the nucleotides in tRNA required for aminoacylation are conserved in evolution, bacterial ami
111 functionally active in ATP-PPi exchange and aminoacylation assays, and showed similar Km for L-proli
112 ircular dichroism and NMR spectroscopies and aminoacylation assays, we have investigated the function
113 elopment of tRNA nucleotide determinants for aminoacylation being interdependent with those for ribos
114 evolution of amino acid specificity and tRNA aminoacylation, both essential for expanding the genetic
115 the leucine-specific domain is critical for aminoacylation but not required for editing activity.
116 ed with ATP, yet decreases the efficiency of aminoacylation by 10(3)-fold while significantly elevati
117 peptide reduces the catalytic efficiency of aminoacylation by a factor of 100 that largely results f
124 tRNA are important identity determinants for aminoacylation by cognate aminoacyl-tRNA synthetases.
126 -protein interactions critical for efficient aminoacylation by E. coli HisRS helps to further charact
128 an essential identity determinant for proper aminoacylation by isoleucyl tRNA synthetase (IleRS) and
131 structural requirements of the anticodon for aminoacylation by methionyl tRNA synthetase and IleRS.
135 on of tRNA(ala)(GAC) at a site that prevents aminoacylation by the dicot alanyl-tRNA synthetase, indi
137 th EF-1alpha, suggesting that the product of aminoacylation can be directly handed off to EF-1alpha f
138 he 2'-hydroxyl of A66, are also critical for aminoacylation catalytic efficiency by human ProRS.
139 ayed a refolding defect resulting in reduced aminoacylation compared to wild type after renaturation.
140 s within the RDW peptide are critical to the aminoacylation complex, but impacted amino acid editing
142 Here we identify a new pathway for lipid aminoacylation, conserved in many Actinobacteria, which
143 tRNA acceptor stem end between the canonical aminoacylation core and a separate domain called CP1 tha
144 ta-strands, which link the CP1 domain to the aminoacylation core of LeuRS, are required for editing o
145 ucts are translocated 30A from the canonical aminoacylation core to a hydrolytic editing-active site
146 n bacterial and mammalian systems, errors of aminoacylation could be mutagenic and lead to disease.
148 translational fidelity both by enhancing the aminoacylation efficiencies of the three aaRSs in the co
149 iant enzyme displayed significantly improved aminoacylation efficiency for the G34A mutant, suggestin
150 rminal fragment in trans did not improve the aminoacylation efficiency of the N-terminal fragment to
151 fluence amino acid binding, tRNA binding and aminoacylation efficiency, but they play no role in eith
152 ssociation in the MARS complex enhances tRNA-aminoacylation efficiency, which is in part dependent on
154 tions with the ribosome, with PoxA-catalyzed aminoacylation evolving later as a secondary mechanism t
156 transcriptase polymerase chain reaction and aminoacylation experiments of N. equitans tRNA demonstra
157 -tRNA synthetase (hs mt LeuRS) achieves high aminoacylation fidelity without a functional editing act
158 class of ribozymes (ACT) that catalyze self-aminoacylation from a number of CoA thioesters with cata
159 The same selection also showed that RNA aminoacylation from adenylate is simpler than from CoA t
160 to improve the anticodon specificity of tRNA aminoacylation from bacteria to humans, possibly to acco
161 emoval of 3'-primer before reaction selected aminoacylation from PheAMP in three cycles, yielding act
166 ants were pleiotropic, exhibiting defects in aminoacylation, global structure, and elongation-factor
168 It is hypothesized that KARS variants affect aminoacylation in inner-ear cells by interfering with bi
171 and L570 in E. coli LeuRS) strongly impacts aminoacylation in two ways: it affects both amino acid d
179 eas in the steady state, the overall rate of aminoacylation is limited by amino acid activation to a
180 deacylated tRNA, which accumulates when tRNA aminoacylation is limited by lack of substrates or inhib
182 mechanism suggested by these data to promote aminoacylation is reminiscent of the NAD(+)-dependent me
183 etases (aaRSs), the rate-determining step in aminoacylation is the dissociation of charged tRNA from
184 The catalytic efficiency of steady-state aminoacylation (k(cat)/K(M)) with lysine by LysRS1 varia
185 that the rate of the chemical step for tRNA aminoacylation (k(chem)) exceeds the steady-state rate b
186 stacking interactions with U34 and U35, and aminoacylation kinetics also identified direct interacti
189 te and noncognate reactions by ATP/PP(i) and aminoacylation kinetics strongly suggests that SepRS is
190 tain bacterial and eukaryotic tRNAs enhances aminoacylation kinetics, assists proper codon-anticodon
191 obal translation in this organism; that tRNA aminoacylation levels exert, at most, weak control over
192 eins in response to fluctuating transfer RNA aminoacylation levels under various nutritional states.
193 nd LysRS2 do not drastically impact cellular aminoacylation levels, focusing attention on the mechani
194 84 traps the enzyme-tRNA complex in a novel 'aminoacylation-like' conformation, forming novel interac
196 talytic importance of the A76 2'-OH group in aminoacylation mirrors a similar role for this moiety th
197 splicing, as well as tRNA nuclear export and aminoacylation, occur efficiently when the SEN complex i
198 s is the first example from nature of direct aminoacylation of a tRNA with a non-canonical amino acid
203 nsfer RNA synthetases through their accurate aminoacylation of cognate tRNAs and their ability to cor
204 x and by coupling two stages of translation: aminoacylation of cognate tRNAs and their subsequent cha
206 resistance to antimicrobial peptides through aminoacylation of lipopolysaccharide (LPS), expected to
207 nyl-S-PCP intermediate; (ii) we confirm that aminoacylation of LnmP by LnmQ in trans is the result of
209 drial tRNA by human mtMetRS, the kinetics of aminoacylation of native bovine mtRNA(Met) and of an in
214 expression of AtKRS in carrot cells promotes aminoacylation of such tRNAs in vivo and translational r
218 an be considered allosteric enzymes in which aminoacylation of the tRNA acceptor stem is enhanced upo
219 the unnatural base pair into mRNA and tRNA, aminoacylation of the tRNA with a non-canonical amino ac
222 This TLS not only acts like a tRNA to drive aminoacylation of the viral genomic (g)RNA, but also int
224 ombined accuracy of two basic processes: the aminoacylation of transfer RNAs with their cognate amino
226 ep in protein biosynthesis is the 2(')(3(')) aminoacylation of tRNA by aminoacyl-tRNA synthetases.
227 t t(6)A is a strong positive determinant for aminoacylation of tRNA by bacterial-type but not by euka
232 denylate, inhibits translation by preventing aminoacylation of tRNA(Asp) by aspartyl-tRNA synthetase
236 A(i)(Met) and other tRNA precursors, and the aminoacylation of tRNA(i)(Met) are also strongly impaire
237 he RNA elements required for recognition and aminoacylation of tRNA(Pyl) in vivo by using the Pyl ana
240 y of tyrosyl-tRNA synthetase to catalyze the aminoacylation of tRNA(Tyr), we have expressed each of t
241 l domain of Escherichia coli LeuRS abolished aminoacylation of tRNALeu and also amino acid editing of
243 ility of essential amino acids (EAAs) limits aminoacylation of tRNAs by their cognate EAAs and activa
245 rules of the genetic code are established by aminoacylations of transfer RNAs by aminoacyl tRNA synth
246 on general features, such as the position of aminoacylation on the 3'-terminal tRNA ribose, and the t
247 We identified components of an indirect aminoacylation pathway for Gln-tRNA(Gln) biosynthesis in
248 trate a potential role for the indirect tRNA aminoacylation pathway in regulating translational fidel
249 picoplast proceeds via an essential indirect aminoacylation pathway that is reminiscent of bacteria a
250 te Plasmodium falciparum apicoplast indirect aminoacylation pathway utilizes a non-discriminating glu
255 thanocaldococcus jannaschii tRNA(Cys) in the aminoacylation reaction for the two Methanococcus maripa
256 oduction by a tRNA synthetase is through the aminoacylation reaction intermediate aminoacyl-AMP, thus
257 c aminoacyl-adenylates as substrates in tRNA aminoacylation reaction may provide a way for incorporat
258 xpense of a significantly slower rate in the aminoacylation reaction, suggesting a previously unrecog
259 were otherwise completely inactive in direct aminoacylation reaction, thus bypassing the natural mech
260 cus is able to perform the first step of the aminoacylation reaction, which involves the activation o
267 ive activation of cognate amino acids at the aminoacylation site and hydrolysis of misformed aminoacy
268 usion, we propose that the plasticity of the aminoacylation site in MST1 allows binding of Ser-AMP an
269 ing a structural motif unrelated to that for aminoacylation so that, remarkably, two motifs (one for
272 cence microscopy studies and analysis of the aminoacylation state of nuclear tRNAs have revealed that
279 don of tRNA, while a 3' domain evaluates its aminoacylation status, overcoming an otherwise stable tr
280 ted the impact of hmt-tRNA(Phe) mutations on aminoacylation, structure, and translation elongation-fa
281 Thus, borrelidin competes with all three aminoacylation substrates, providing a potent and redund
282 helices seriously reduces the efficiency of aminoacylation, suggesting that communication requires c
283 ancestral proto-anti-codon RNA (pacRNA) auto-aminoacylation system and show that pacRNAs would natura
284 ere, we used an in vitro reconstituted lipid aminoacylation system to investigate the two phylogeneti
289 ed': one face closely mimics tRNA and drives aminoacylation, the other face diverges from tRNA and en
290 role in the evolution of AlaRSs by coupling aminoacylation to editing to prevent mistranslation.
293 etabolism (3' end cleavage, CCA addition and aminoacylation) toward an understanding of molecular mec
296 her, competition among tRNA isoacceptors for aminoacylation underlies the robustness of protein synth
298 hanges in the steady-state kinetics of LeuRS aminoacylation were observed upon the addition of ProRS.
300 Previous work showed chiral preference of aminoacylation with a nonprotein, nonribozyme, RNA-direc
301 the specificity helix, accelerates tRNA(Trp) aminoacylation with approximately 10-fold specificity to
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