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1 ine 5'-diphospho-beta-(4-deoxy-4-formamido-L-arabinose).
2 tion with 2,3,5-tri-O-benzyl-D-ribose and -D-arabinose.
3 llulose, which is composed of d-xylose and l-arabinose.
4 se, galactose, lactose, fructose, ribose and arabinose.
5 uires the binding of one or two molecules of arabinose.
6 rabinose and the other subunit does not bind arabinose.
7 for pairs of DNA half-sites is controlled by arabinose.
8 r controls antigen gene expression by adding arabinose.
9 d magnitude (K(d)=0.37 mM) in the absence of arabinose.
10 protein and thereby induce CDI by removal of arabinose.
11 in response to the absence or presence of l-arabinose.
12 ossible contribution of the alpha-anomer for arabinose.
13 and not in response to its native effector L-arabinose.
14 on of psl could be controlled by addition of arabinose.
15 uced substantial biofilms in the presence of arabinose.
16 thiazole addition chemistry, starting from L-arabinose.
17 sound-induced whey protein (WP) glycation by arabinose.
18 concentrated acid were rhamnose, mannose and arabinose.
19 sis of cell wall-building components such as arabinose.
20 se, while the R analogue was obtained from L-arabinose.
23 pyruvate (PEP) and the corresponding aldose: arabinose 5-phosphate (A5P) and erythrose 4-phosphate (E
24 DO8P) synthase catalyzes the condensation of arabinose 5-phosphate (A5P) and phosphoenolpyruvate (PEP
25 KDO8P synthase catalyzes the condensation of arabinose 5-phosphate (A5P) and phosphoenolpyruvate (PEP
26 incubated with phosphoenolpyruvate (PEP) and arabinose 5-phosphate (A5P) shows the formed product, 3-
27 densation of phosphoenolpyruvate (PEP) and D-arabinose 5-phosphate (A5P) to produce KDO8P and inorgan
28 the conversion of ribulose 5-phosphate into arabinose 5-phosphate (A5P), the first committed step in
30 quence similarity between GutQ and KdsD, a D-arabinose 5-phosphate isomerase (API) from the 3-deoxy-D
32 combinant c3406 protein, found it to possess arabinose 5-phosphate isomerase activity, and characteri
33 nt homology to the sugar isomerase domain of arabinose 5-phosphate isomerases but lacking the tandem
37 erconversion of d-ribulose-5-phosphate and D-arabinose-5-phosphate, the first step in the biosynthesi
38 n fluorescent proteins, rhamnose, ribose and arabinose, all of which could be related to cellular and
39 se; however, a small amount of xylobiose and arabinose also confirmed the presence of xylosidase and
40 he nucleobases, and instead proceeds through arabinose amino-oxazoline and anhydronucleoside intermed
44 allographic structures of the complexes with arabinose and cellotriose reveal the important role of s
46 xperiments involved reactions of d-xylose, d-arabinose and d-ribose with glycine, alpha-l- or beta-al
47 Transcription of the genes required for l-arabinose and d-xylose consumption is regulated by the s
48 li can rapidly switch to the metabolism of l-arabinose and d-xylose in the absence of its preferred c
51 Mannoproteins and polysaccharides rich in arabinose and galactose (PRAG) were poor foam formers bu
52 II (RG-II), but only Polysaccharides Rich in Arabinose and Galactose (PRAGs) were considered in the f
53 d that the cell walls are highly enriched in arabinose and galactose, two major residues of arabinoga
55 iffusion of L-glutamine, the monosaccharides arabinose and glucose, and the tetrasaccharide stachyose
56 iffusion of L-glutamine, the monosaccharides arabinose and glucose, the disaccharide sucrose, and eve
58 d to activate transcription in response to D-arabinose and not in response to its native effector L-a
61 s in which one subunit is capable of binding arabinose and the other subunit does not bind arabinose.
62 -epimerase gene correlated with increases in arabinose and uronic acid content in seedling cell walls
63 ), Tyr(92), or Asn(139), which interact with arabinose and xylose side chains at the -2* subsite, abr
68 e utilization, fermentation of salicin and d-arabinose, and expression of beta-glucosidase activity,
69 ngs cooperatively incorporated xylose (Xyl), arabinose, and glucuronic acid residues from their corre
71 ce the response of the reported mutants to D-arabinose, and the mutants are not induced by other suga
73 the toolkit, particularly those recognizing arabinose- and/or galactose-containing structures, are p
75 luding unique Hep and 4-amino-4-deoxy-beta-L-arabinose (Ara4N) monosaccharides and branched Hep-Hep d
76 e positively charged sugar 4-amino-4-deoxy-l-arabinose (Ara4N) to lipid A in their outer membrane.
82 strate specificity is conferred by a shallow arabinose binding pocket adjacent to the deep active sit
84 ive subsites in the catalytic cleft and an l-arabinose-binding pocket at the bottom of the cleft.
85 namics that accompany the interaction of the arabinose-binding protein (ABP) with its ligand, d-galac
88 lved the crystal structures of the apo and L-arabinose-bound BtAraR proteins, as well as the complex
90 ching angiosperms and eudicot xylan, lacking arabinose but possessing acetylation on alternate xylosy
91 e-Drosophila melanogaster prefers D- over L- arabinose, but forms long-term memories of L-arabinose m
94 genes, many of which are involved in xylose, arabinose, cellobiose, and hemicellulose metabolism.
95 ective in arabinosyltransferases that extend arabinose chains, indicating that CLV3 must be fully ara
96 e co-utilized and utilization of mannose and arabinose commences before glucose and xylose are exhaus
101 ium smegmatis resulted in a reduction of the arabinose content of both AG and LAM that accompanied th
103 position of the NTP, including 2',3'-ddCTP, arabinose-CTP, and 2'-O-methyl-CTP, inhibit polymerase,
104 with a wide range of substrates, including L-arabinose, D-fucose, D-galactose, D-glucose, and D-xylos
107 GH43 enzymes, suggesting that the extensive arabinose decorations appended to pectins and xylans may
110 rate, comparable to the recently described L-arabinose degradation pathway of Azospirillum brasilense
111 rmediates to catabolize L-arabinose via an L-arabinose dehydrogenase, AraA(At), encoded at the Atu111
113 M by AraC, in contrast to the well-described arabinose-dependent activation of other target genes.
114 ive rfaH promoter with the tightly regulated arabinose-dependent araC P(BAD) promoter so that rfaH ex
118 rsinia pseudotuberculosis mutant strain with arabinose-dependent regulated and delayed shutoff of crp
120 s KIM5+, a Deltacrp mutant and a mutant with arabinose-dependent regulated delayed-shutoff crp expres
122 is described starting from D-mannnose and L-arabinose derivatives for the D- and L-series, respectiv
124 lective 1,3-dipolar cycloadditions between d-arabinose-derived nitrones and d-mannitol-derived trans-
125 siological recordings indicate that L- and D-arabinose differentially activate Gr43a-expressing neuro
127 reorient DPA to the periplasm, allowing this arabinose donor to then be used in the buildup of the ar
128 Mutations in decaprenylphosphoryl-beta-D-arabinose (DPA) biosynthetic and utilization pathway gen
129 ormation of decaprenyl-monophosphoryl-beta-D-arabinose (DPA) in the genome of M. tuberculosis led us
130 sweet and chemically similar sugars-L- and D-arabinose-Drosophila melanogaster prefers D- over L- ara
131 s composed of glucose, galacturonic acid and arabinose; for amaranth, xylose was also a major constit
134 ,(1 --> 4)-beta-D-glucans, a gradual loss of arabinose from glucuronoarabinoxylans, and an increase i
135 decaprenyl phosphate-4-amino-4-deoxy-alpha-l-arabinose from undecaprenyl phosphate-4-deoxy-4-formylam
138 both E. coli EDL933 and E. coli MG1655 used arabinose, fucose, and N-acetylglucosamine in the intest
139 d structurally related carbohydrates such as arabinose, fucose, methyl galacturonate and N-acetylgala
140 lbatana terroirs wines, and it modified the (Arabinose+Galactose)/Rhamnose ratio in Canada Judio, Alb
141 y and fraction 10R was composed of rhamnose, arabinose, galactose and uronic acid in 2.8:65.8:28.5:3M
144 he most abundant monosaccharide present with arabinose, galactose, xylose and mannose as minor consti
145 The use of commercial enzyme modified the Arabinose/Galactose and the Rhamnose/Galacturonic acid r
147 n the extracted polysaccharides, followed by arabinose, glucose, galacturonic acid, rhamnose, mannose
148 termined monosaccharides (fucose, galactose, arabinose, glucose, rhamnose, xylose, mannose, fructose
151 by total acid hydrolysis, resulting in a Xyl:arabinose:glucuronic acid molar ratio of approximately 1
153 evidence for a diversity of chlorogenic acid-arabinose hybrids formed during roasting, opening new pe
154 (1) was synthesized from readily available d-arabinose in 11% overall yield and >99.5/0.5 dr (diaster
155 enyl phosphate-4-deoxy-4-formylamino-alpha-l-arabinose in polymyxin-resistant strains of E. coli and
159 y sulfated 3-linked beta-arabinan (Ab1) with arabinose in the pyranose form was obtained from green s
161 en added by loxP/Cre recombination using the arabinose inducible cre gene in the EL350 bacteria.
162 s cloned and placed under the control of the arabinose-inducible ara promoter and transformed into a
163 the hypoxia-responsive fdhF promoter, or the arabinose-inducible araBAD promoter, the bacteria invade
165 The complete genetic program containing an arabinose-inducible FimE controlling CheW/CheW* (and con
167 he oriV origin, this vector is capable of an arabinose-inducible increase in plasmid copy number.
169 (P(R)), which is negatively regulated by an arabinose-inducible P22 c2 gene located on both the plas
170 ked to MG_454, we cloned this gene behind an arabinose-inducible PBAD promoter in plasmid pHERD20T an
171 ENTR/SD/D-TOPO and transferred to a low copy arabinose-inducible pBAD/Myc-HisA expression plasmid con
172 cells carrying adrA under the control of an arabinose-inducible promoter produced substantial biofil
173 H15) containing surA under the control of an arabinose-inducible promoter restored in vivo binding an
176 uction of Dam in A. hydrophila SSU, using an arabinose-inducible, P(BAD) promoter-based system, reduc
179 drolyzable branched RNA analogues containing arabinose instead of ribose at the branchpoint junction
180 ment of recombinant organisms that convert l-arabinose into fuels and chemicals using the fungal l-ar
181 ral small molecules (glucarate, acrylate and arabinose) into the production of green fluorescent prot
184 ndicated that its cleavage pattern producing arabinose is associated with the chemical recognition of
185 arm of the AraC gene regulatory protein when arabinose is bound to the protein and the dramatically d
187 onic substituents, such as 4-amino-4-deoxy-L-arabinose (L-Ara4N) and phosphoehthanolamine (pEtN) at t
188 ontaining residues such as 4-amino-4-deoxy-l-arabinose (l-Ara4N) and phosphoethanolamine (pEtN) to Es
189 the addition of the sugar 4-amino-4-deoxy-L-arabinose (L-Ara4N) is a strategy adopted by pathogenic
190 cation of lipid A with the 4-amino-4-deoxy-L-arabinose (L-Ara4N) moiety is required for resistance to
191 ated that incorporation of 4-amino-4-deoxy-l-arabinose (l-Ara4N) to the lipid A moiety of lipopolysac
193 ll walls of other organs and cells had lower arabinose levels in roots and pollen tubes, but no diffe
194 omers, including the d and l enantiomers for arabinose, lyxose, ribose, xylose, ribulose, and xylulos
195 A gguC deletion affected growth only on L-arabinose medium, suggesting that gguC encodes an enzyme
196 ng that gguC encodes an enzyme specific to L-arabinose metabolism, and this gene was renamed araD1.
197 , only ytfQ has an established connection to arabinose metabolism, suggesting that AraC has a broader
202 idopsis (Arabidopsis thaliana) low cell wall arabinose mutant murus5 (mur5) encodes a defective allel
203 t alleles of RGP2, a gene that encodes a UDP-arabinose mutase that interconverts UDP-arabinopyranose
204 rabinofuranosidase that hydrolyses O3-linked arabinose of doubly substituted xylans, a feature of the
206 protein, which regulates expression of the l-arabinose operon in Escherichia coli, is a dimer whose D
207 onstructed a new strain containing a tunable arabinose operon promoter PBAD to quantitatively control
209 cell cultures were incubated with l-[1-(3)H]arabinose or (E)-[U-(14)C]cinnamate (radiolabelling the
210 minaceous monocots, over the O-2 position of arabinose or the O-6 position of galactose residues.
211 on the dimerization domain's ability to bind arabinose or to dimerize the protein or on the DNA-bindi
212 n free energy of transfer between ribose and arabinose or xylose are attributed, at least in part, to
213 ransport shows interesting overlaps to the D-arabinose pathway, representing another example for path
214 alactan and EmbC is involved in transferring arabinose, perhaps in the early stage of arabinan synthe
217 t of most carbohydrates; although ribose and arabinose produced more PhIP (44-46 pmol of PhIP/mumol o
218 were inserted between the Escherichia coli l-arabinose promoter and bgaB (beta-galactosidase from Bac
220 misL gene was driven by the Escherichia coli arabinose promoter, MisL could be detected in the S. Typ
225 ll on a variety of carbon sources, including arabinose, pyruvate, succinate, and malate, but, unlike
226 sory neurons communicate information about L-arabinose quality and concentration-features relevant fo
229 m strain chi8937, with deletions of asdA and arabinose-regulated expression of murA, two genes requir
231 hat encodes a domain that contributes to the arabinose-regulated lysis phenotype but has a eukaryotic
232 component is plasmid pYA3681, which encodes arabinose-regulated murA and asdA expression and C2-regu
233 o the presence of its cognate sugar than the arabinose-regulated promoter ParaBAD and provided tighte
237 wed that Rv3792 gene product can transfer an arabinose residue to the C-5 position of the internal 6-
238 known mechanisms, such as those occurring in arabinose residues of coffee arabinogalactan side chains
239 anosidase, removing single terminally-linked arabinose residues, decreased the extent of B cell activ
240 , these results show the relevance of single arabinose residues, present at the non-reducing end of p
241 rulic acid esterified to the O-5 position of arabinose residues, typical of graminaceous monocots, ov
245 e have addressed the question of whether the arabinose response of AraC requires the binding of one o
247 al analysis revealed a dramatic reduction of arabinose resulting in a novel truncated AG structure po
248 molecular weight of 2720kDa, are composed of arabinose, rhamnose, glucose, fructose, galactose and xy
249 ncluding selectivity toward pentoses such as arabinose, ribose, and xylose to the exclusion of the ex
250 made up approximately 40-60% of the SDF and arabinose-rich pectic polysaccharides represented approx
251 ermentabilities in human faecal cultures and arabinose-rich POS2 had the greatest prebiotic potential
252 s high in IL 6-3, IL 7-2 and IL 6-2, whereas arabinose showed a low content in IL 10-2, IL 6-3 and IL
253 s showed that this strain could use both the arabinose side chains and xylose backbones up to xylotet
254 The arabinoxylan backbone is decorated with arabinose side chains that may be substituted with ferul
256 logous O-antigens, whereas in the absence of arabinose, SLT16 (pCZ1) mainly expressed the heterologou
257 wt% aldose (for example, glucose, xylose or arabinose) solution with a 4:1 aldose:sodium tetraborate
260 ve site are solvent exposed, indicating that arabinose substituents can be accommodated in the glycon
261 the product profile showed that it produced arabinose substituted oligosaccharides (AXOS) having 2-1
262 d different requirements for the lengths and arabinose substitution pattern of the oligosaccharides t
264 ease to be synthesized due to the absence of arabinose such that attenuation is gradually manifest in
265 plant-specific glycosyltransferases that add arabinose sugars to diverse proteins including cell wall
270 inans releasing arabino-oligosaccharides and arabinose, the second most abundant pentose in nature.
272 raC gene no longer require the presence of l-arabinose to convert AraC from its repressing to its ind
274 the enzyme that transfers 4-amino-4-deoxy-l-arabinose to lipid A in polymyxin-resistant strains.
275 ment of the cationic sugar 4-amino-4-deoxy-l-arabinose to lipid A, a reaction catalyzed by the integr
276 eterminants responsible for isomerization of arabinose to ribulose in vivo and galactose to tagatose
277 ecular weights of 620,000 and 470,000Da with arabinose to xylose ratio of 0.7 and 0.6, respectively.
278 had lower endoxylanase activities and higher arabinose-to-xylose ratios of WU-AX than those of corres
283 selectable markers (sacB, pheS, gat and the arabinose-utilization operon) and lambda-Red mutant prot
285 phosphorylated intermediates to catabolize L-arabinose via an L-arabinose dehydrogenase, AraA(At), en
286 evented the excess DNA replication only when arabinose was added to the medium to induce the synthesi
288 colonization of host lymphoid tissues, where arabinose was not available, the P(BAD) promoter was no
289 tant harboring pHERDMG454, when induced with arabinose, was able to reverse its sensitivity to organi
291 utilization of glucose, xylose, fucose, and arabinose, which are also substrates for the ChvE-MmsAB
292 ctions as a replicon only in the presence of arabinose, which is not present in significant levels in
294 including glucose, galactose, xylose, and L-arabinose, with a requirement for the glucose stereo con
296 e profile of the wheat bran was dominated by arabinose, xylose, and glucose, whereas mannose and gala
298 s based on the simultaneous determination of arabinose, xylose, xylo-oligosaccharides (XOS), and AXOS
299 he Lewis acid mediated reduction of ribose-, arabinose-, xylose-, and lyxose-derived methyl and pheny
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