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1 o the delivery of p62 and its cargoes to the autophagosome.
2 proteins to allow growth and closure of the autophagosome.
3 ed to encapsulate autophagic cargo within an autophagosome.
4 f VZV particles housed in a double-membraned autophagosome.
5 formed from the fusion of an endosome and an autophagosome.
6 contents into a double-membrane vesicle, the autophagosome.
7 f-eating by a double-membrane organelle, the autophagosome.
8 called the phagophore that matures into the autophagosome.
9 entriolar satellites colocalize with forming autophagosomes.
10 uitment and defective formation of canonical autophagosomes.
11 ve LC3, suggesting that they originated from autophagosomes.
12 mentin cage independent of MAP1LC3B positive autophagosomes.
13 ntation, disorganised cristae, and increased autophagosomes.
14 response by localizing ER-resident STING to autophagosomes.
15 malian target of rapamycin with LC3-positive autophagosomes.
16 sicles; viral particles were not observed in autophagosomes.
17 ron microscopy we identified double-membrane autophagosomes.
18 omal dysfunction and impaired degradation of autophagosomes.
19 , which led to the association of TRAF6 with autophagosomes.
20 AB11-positive recycling endosomes to forming autophagosomes.
21 ysosomes for degradation via double-membrane autophagosomes.
22 rom the axon combined with locally generated autophagosomes.
23 livered to lysosomes for degradation through autophagosomes.
24 )P and promoting actin nucleation at nascent autophagosomes.
25 positively regulates RAB7 recruitment to LE/autophagosomes.
26 n its host cells, including the induction of autophagosomes.
27 ght to act as a membrane carrier for forming autophagosomes.
29 c constituents, leading to generation of the autophagosome, a double-membrane vesicle, which is targe
33 LIV pathology, including the contribution of autophagosome accumulation to muscle dystrophy and the r
34 FLT3-ITD molecules were detectable within autophagosomes after bortezomib treatment indicating tha
35 ses, including endosome formation, fusion of autophagosomes/amphisomes with lysosomes, and apoptosis.
36 rane trafficking and remodelling to form the autophagosome and deliver its contents to lysosomes for
37 her small GTPase, Rab2, is also required for autophagosome and endosome maturation and proper lysosom
38 biogenesis, loss of all Atg8s yields smaller autophagosomes and a slowed initial rate of autophagosom
39 duced LC3-II formation and a lower number of autophagosomes and autolysosomes during both basal and s
40 ated using electron microscopic detection of autophagosomes and by measuring LC3B protein lipidation
41 tion increased the formation of LC3-positive autophagosomes and degradation of cargo both in human ce
42 gy, in which mitochondria are sequestered by autophagosomes and delivered to lysosomes for degradatio
43 developed a procedure to purify HCV-induced autophagosomes and demonstrated that HCV could induce th
44 hesize that CFS1 acts at the intersection of autophagosomes and endosomes and contributes to cellular
46 aneously monitoring different populations of autophagosomes and identified 34 out of 186 Rab GTPase,
47 8 (PNPLA8) gene, and PNPLA8 associates with autophagosomes and is associated with a decrease in cell
48 n-binding protein that aggregates protein in autophagosomes and is degraded upon autophagy that was r
49 njugation system in mediating the closure of autophagosomes and its implication in the study of autop
50 is caused by perturbed delivery of cargo via autophagosomes and late endosomes to SiNP-filled catheps
55 vacuolar compartment or VAC) in turnover of autophagosomes and persistence during neural infection.
58 the formation of double-membrane autophagic autophagosomes, and this process is operational in airwa
59 n of double-membrane-bound structures called autophagosomes (AP), which engulf material to be degrade
63 vity, and proximal tubular mitochondrial and autophagosome area and number (by transmission electron
67 as localized in the cell nuclei, ~30% was in autophagosomes/autophagolysosomes and the remainder was
70 tion of SNARE priming, the initial stages of autophagosome biogenesis and autophagosome expansion rem
71 that both of these proteins cause increased autophagosome biogenesis and compromised lysosomal activ
73 Neurons are highly polarized cells in which autophagosome biogenesis is spatially compartmentalized.
74 taining vesicles is considered a key step in autophagosome biogenesis, aided by Atg1 complexes (ULK1
75 centrosome occurs during starvation-induced autophagosome biogenesis, but how centrosomal proteins r
76 berrant Atg8 puncta and drastically impaired autophagosome biogenesis, leading to severe defects in n
77 h neither GABARAPs nor LC3s are required for autophagosome biogenesis, loss of all Atg8s yields small
78 the ATG4 protease, an essential protein for autophagosome biogenesis, plays a central role for the r
79 mainly in yeast, including the mechanism of autophagosome biogenesis, the function of the core macro
83 pro-LC3 and the de-lipidation of LC3-PE from autophagosomes, both executed by the same cysteine prote
85 bules when in tight association with forming autophagosomes, but independently of the mitochondrial d
86 is replicates both in the cytosol and within autophagosomes, but the bacteria failed to replicate whe
87 protein FUNDC1 interacts with LC3 to recruit autophagosomes, but the mechanisms integrating these pro
88 eins are attached to the membrane of nascent autophagosomes, but their functions during autophagy are
89 romises autophagy at the maturation stage of autophagosomes by interacting with Beclin 1/Rab7 and dys
90 ysis of proteins associated with HCV-induced autophagosomes by proteomics led to the identification o
91 esult in reduced processing of the excessive autophagosomes by the rate-limiting lysosomal activity.
92 on and maturation of the phagophore into the autophagosome, by facilitating the recruitment of the At
93 Moreover, there was evidence of impaired autophagosome clearance after chloroquine administration
94 reased glucocerebrosidase activity, impaired autophagosome clearance by the lysosome, and decreased m
95 also demonstrate that RAB2A is required for autophagosome clearance in human breast cancer cells.
96 hanistic explanation for the coordination of autophagosome completion and fusion with the vacuole.
98 93A)), we show that motor neurons form large autophagosomes containing ubiquitinated aggregates early
101 we show that CCT integrity is essential for autophagosome degradation in cells or Drosophila and thi
102 osomes in many cellular functions, including autophagosome degradation, cholesterol homeostasis, anti
103 state, the cell soma contains populations of autophagosomes derived from distinct neuronal compartmen
105 tly unfused to lysosomes (or accumulation of autophagosomes) directly induces cellular toxicity, and
106 ave been implicated as a membrane source for autophagosomes, distinct organelles that engulf cellular
108 we showed recently that vaccines composed of autophagosomes (DRibbles) derived from syngeneic sarcoma
110 We propose that the acute need to produce autophagosomes during starvation drives the interaction
114 ngly, the autophagy product ATG5 involved in autophagosome elongation positively regulated TG2/NF-kap
115 f Atg5, an E3 ubiquitin ligase essential for autophagosome elongation, in macrophages impaired the re
116 breakdown of mitochondrial inner membranes, autophagosome enclosure of paternal mitochondria, and PM
117 s a significant increase in puncta of LC3(+) autophagosomes, endogenous levels of LC3-II, and ultrast
120 itial stages of autophagosome biogenesis and autophagosome expansion remain resistant to its loss.
121 c components by multilayered vesicles called autophagosomes, followed by lysosomal fusion and degrada
122 condary receptor to assist RIG-I delivery to autophagosomes for degradation in a p62-dependent manner
125 y induce the association of lipid rafts with autophagosomes for its RNA replication.IMPORTANCE HCV ca
127 ine that, in Caenorhabditis elegans neurons, autophagosomes form near synapses and are required for n
128 onse, whereas chronic alcohol exposure slows autophagosome formation along with an elevation of gut-d
129 n 1, known to play an important role in both autophagosome formation and autolysosome fusion, in indu
130 rfering RNA-mediated WNK1 knockdown, we show autophagosome formation and autophagic flux are accelera
132 PCM1 enhances GABARAP/WIPI2/p62-positive autophagosome formation and flux but has no significant
133 DAC cells, chemotherapeutic agents triggered autophagosome formation and increased LC3 expression thr
134 in ubiquitin binding, was also defective in autophagosome formation and recruitment to the Atg12-5-1
137 anes, where they have been proposed to drive autophagosome formation and selective sequestration of c
139 t LC3/GABARAP proteins are not essential for autophagosome formation but are critical for autophagoso
140 phosphorylation at Ser-177 was required for autophagosome formation but not for Optn recruitment to
141 ective hepatocytes was not due to defects in autophagosome formation but was due to impairment of lip
146 lated 7 (Atg7) and Atg16L1 and the status of autophagosome formation in the hippocampus of immature r
150 Our findings provide key insights into how autophagosome formation is regulated by a novel negative
152 pharmacologic treatments that either inhibit autophagosome formation or block the fusion of autophago
154 that ULK1, a protein kinase activated at the autophagosome formation site, phosphorylates human ATG4B
156 e fusion, in induction of LC3II, a marker of autophagosome formation, and in induced degradation of p
157 d conversion of LC3B-I to LC3B-II, decreased autophagosome formation, and increased p62 level compare
158 lly tethers ER and mitochondria also reduces autophagosome formation, and that this artificial tether
160 nt in isolation membrane (or phagophore) and autophagosome formation, maturation, or autophagosome-ly
161 d with ATG8-family-specific functions during autophagosome formation, on residues absent in the LC3 f
162 of the cellular sites believed to engage in autophagosome formation, review basic mechanisms used to
163 ecause AP1S3 encodes a protein implicated in autophagosome formation, we next investigated the effect
164 as Orencia), demonstrated reduced levels of autophagosome formation, while DCs from CTLA4-Ig-treated
183 the phagophore assembly site (PAS), where an autophagosome forms, at a very early stage of autophagy,
184 n that was accompanied by increased podocyte autophagosome fractional volume and p62 aggregation, whi
187 inity chromatography for the purification of autophagosomes from cells that harbor an HCV subgenomic
189 erization is necessary for the biogenesis of autophagosomes from the endoplasmic reticulum (ER) membr
196 Recent studies established that nascent autophagosomes in distal axons move predominantly in the
198 dition, electron microscopy showed increased autophagosomes in rod inner segments with HDAC inhibitor
200 ated substrates in an expanded population of autophagosomes in the absence of greater autophagy induc
206 n of IBTKalpha helps prevent accumulation of autophagosome intermediates stemming from exposure to sa
210 noparticles were localized within macrophage autophagosomes, leading to a 4-fold enhancement of mitoc
211 agy, manifested by an accumulation of sealed autophagosomes located in close proximity to lysosomes b
213 s in the first intron of genes that regulate autophagosome/lysosomal degradation, mitochondrial traff
215 as recently emerged as a master regulator of autophagosome-lysosome function, controlling the express
216 regulation of syntaxin 17, a SNARE promoting autophagosome-lysosome fusion and cargo degradation.
217 has an antiamyloidogenic function, promoting autophagosome-lysosome fusion and increasing betaCTF deg
219 ic capacity but has no significant effect on autophagosome-lysosome fusion or autolysosomal clearance
220 lso demonstrated that IBDV infection induced autophagosome-lysosome fusion, but without active degrad
221 us the Ccz1-Mon1-Rab7 module is required for autophagosome-lysosome fusion, whereas Rab5 loss interfe
222 ily promotes PLEKHM1 recruitment and governs autophagosome-lysosome fusion, whereas the LC3 subfamily
230 estingly, the majority co-localizes with the autophagosome marker ATG8, and anti-NAP1 identifies auto
232 ulation of lipidated light chain 3 (LC3), an autophagosome marker, by Western blotting and confocal f
233 NOD1 promoted pro-IL-1beta restriction and autophagosome maturation arrest, while NOD2 promoted cas
235 d interference with cellular membrane fusion/autophagosome maturation could have unfavorable conseque
238 By slowing substrate delivery to lysosomes, autophagosome maturational delay, as further confirmed b
240 iquitin (UB)-like proteins conjugated to the autophagosome membrane and are thought to facilitate car
242 milieu, gangliosides are constituents of the autophagosome membrane, a subset of proteins composing t
245 vae administered ALA + DFO showed hepatocyte autophagosomes, nuclear membrane ruffling, and porphyrin
247 g autophagy, Sec24 phosphorylation regulates autophagosome number and its interaction with the C-term
248 hanced gut-derived LPS decreases the hepatic autophagosome numbers in response to alcohol exposure, a
251 on co-expressed beclin-1 or LC3, markers for autophagosome or autophagolysosome formation, and perili
254 ating the PA content of the ATG16L1-positive autophagosome precursor membranes through PLD1 activity
256 3 is localized to ATG16L1- and ATG9-positive autophagosome precursors and we show that HS1BP3 binds p
257 n complex translocates to the ATG9A-positive autophagosome precursors in a PI3P-dependent manner.
258 ine TG neurons triggered unusual clusters of autophagosomes, predominantly in neurons lacking detecta
260 nally, serine 34/35 phosphorylation enhances autophagosome recruitment to mitochondria in HeLa cells.
262 The role of cytotoxicity in accumulating autophagosomes (representing synthesis of autophagosomes
265 data suggest that production/accumulation of autophagosomes subsequently unfused to lysosomes (or acc
266 ng autophagosomes (representing synthesis of autophagosomes subsequently unfused to lysosomes) has no
269 In certain stress conditions, increased autophagosome synthesis may be associated with decreased
270 ATG14 contains a C-terminal Barkor/ATG14(L) autophagosome-targeting sequence (BATS) domain that sens
271 mine (PE) on the inner and outer membrane of autophagosomes to allow cargo selection and autophagosom
272 tophagosome formation or block the fusion of autophagosomes to endolysosomal compartments caused an i
273 pairs FA turnover and decreases targeting of autophagosomes to FAs, whereas ectopic expression of aut
274 ggest that FoxO3 stimulates the formation of autophagosomes to increase autophagic capacity but has n
277 double- or multiple-membrane vesicles termed autophagosomes to remove protein aggregates and damaged
281 TT patients display a defective formation of autophagosomes under conditions of nutrient starvation a
282 eads to a rapid increase in the formation of autophagosomes, unique organelles that replenish the cel
283 hat, in DC, specific targeting of HIV Ags to autophagosomes using a microtubule-associated protein L
284 and other short-lived proteins (SLiPs) into autophagosomes via sequestosome (SQSTM1, p62) mediated a
286 association of lipid rafts with HCV-induced autophagosomes was confirmed by Western blotting, immuno
288 ogether, these data support a model in which autophagosomes were directed to the LDs via SQSTM1, whic
289 novo formation of a new organelle called the autophagosome, which either surrounds and sequesters ran
290 a de novo double-membrane vesicle termed the autophagosome, which matures by fusing to the lysosome.
291 in a transient double-membrane organelle, an autophagosome, which subsequently fuses with a lysosome
292 Thus, Trib3 was required for formation of autophagosomes, which accumulated in neurons as autophag
293 of cytoplasmic components in double-membrane autophagosomes, which are delivered to lysosomes for deg
294 pendent recruitment of Rab7 to PI3P-positive autophagosomes, which are generated by the action of the
296 of LC3-II(+) cytosolic structures resembling autophagosomes, which seem to form an intracellular comp
299 or Atg31, leads to a defect in the fusion of autophagosomes with the vacuole and decreased autophagy
300 gen species, leading to sequestration by the autophagosome within approximately 45 min after insult.
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