ライフサイエンスコーパス: bacterial

1 Bacterial 6S RNAs globally regulate transcription by bin

2 tality was 2.9% and was higher in those with bacterial (8.2%), fungal (8.2%), or arboviral (8.9%) dis

3 Bacterial accommodation inside living plant cells is res

4 glycoprotein fibronectin, which facilitates bacterial adherence to host cells.

5 s strains lacking expression of pertactin, a bacterial adhesin and vaccine target, are emerging.

6 Bacterial adhesion to surfaces occurs ubiquitously and i

7 Products of bacterial anaerobic metabolism, like butyrate and other

8 transition zone below the photic zone, where bacterial and archaeal genomes and proteomes undergo a c

9 lity, but the fundamental drivers that shape bacterial and archaeal genomic properties remain uncerta

10 lustered operational taxonomic units, enable bacterial and archaeal ribosomal RNA gene sequences to b

11 rogen sources stimulated bulk phytoplankton, bacterial and DOM production and enriched Synechococcus

12 and assessed rhizosphere and root endosphere bacterial and fungal communities.

13 characterized by recurrent life-threatening bacterial and fungal infections and aberrant inflammatio

14 nt of polymorphonuclear neutrophils (PMN) to bacterial and fungal pathogens as well as to model infla

15 ch, with rapid diagnostic techniques of both bacterial and host factors and high throughput screening

16 cles with lipid compositions that mimic both bacterial and mammalian cell membranes.

17 Encapsulins can be found in fifteen bacterial and two archaeal phyla.

18 est a general mechanism for TSS selection by bacterial, archaeal, and eukaryotic RNAP.

19 Here, we measured fecal-associated bacterial, archaeal, and fungal communities of dairy cow

20 y of Xenopus tropicalis genomic sequences in bacterial artificial chromosomes (BAC) to analyze the ge

21 e the proportion of patients with documented bacterial aspiration pneumonia among comatose ICU patien

22 ICU patients with symptoms suggesting either bacterial aspiration pneumonia or non-bacterial aspirati

23 either bacterial aspiration pneumonia or non-bacterial aspiration pneumonitis.

24 at these particle-associated and free-living bacterial assemblages are functionally different and tha

25 variation between the volatile compounds and bacterial assemblages in meerkat paste, particularly in

26 ed in early infection to initiate the insect-bacterial association.

27 cificity was not due to sterol dependence of bacterial attachment to host cells, which was similar wi

28 membrane interface and are important for the bacterial attachment.

29 n order to manipulate beneficial and harmful bacterial behaviors.

30 lo[4,3-c]quinolines acting as a new class of bacterial betaG-specific inhibitors in a pH-dependent ma

31 l properties, including the ability to alter bacterial biofilm formation.

32 Bacterial biofilms are recalcitrant to antibiotic therap

33 rence tomography (OCT) was used to visualise bacterial biofilms inside the nasogastric feeding tubes.

34 ial microbial processes; and the analysis of bacterial biofilms, where nonspecific methods based on p

35 no such study has utilized RNA derived from bacterial biofilms, which have potentially higher rRNA:m

36 Resource Integration Center (PATRIC) is the bacterial Bioinformatics Resource Center.

37 measurements of carbohydrates, amino acids, bacterial biomarkers (D-amino acids), and plant protein

38 compartments of the protozoa, but not in the bacterial biomass.

39 i subsp. malvacearum (Xcm) are essential for bacterial blight of cotton (BBC).

40 Bacterial bloodstream infection is a common cause of mor

41 Bacterial burden and pulmonary immunopathology of chimer

42 culosis-infected IL-21R KO mice had enhanced bacterial burden and reduced infiltration of Ag-specific

43 s required to modulate lung inflammation and bacterial burden in TB.

44 riaxone)-treated mice, we further reduce the bacterial burden in the brain.

45 Z B cells, preserves IgM levels, and reduces bacterial burden.

46 ol were sufficient to significantly increase bacterial burdens and kidney pathology in mice infected

47 to biochemically isolate host receptors for bacterial cdNs, and we identified the oxidoreductase REC

48 of antibiotic resistance mechanisms at both bacterial cell and community levels.

49 zes to form a discontinuous ring that drives bacterial cell division by directing local cell wall syn

50 study evaluates the impact of intravascular bacterial cell numbers (ie, the level of bacteremia), in

51 ting showed that IFN-beta interacts with the bacterial cell surface.

52 rial peptidoglycan (PG), the coat woven into bacterial cell wall.

53 pproach to eliminating confinement errors in bacterial cells is to analyze molecule displacements onl

54 o fluorescently label the mature PG in whole bacterial cells of Bacillus subtilis.

55 f the macrophages that contained only 1 to 5 bacterial cells.

56 host various types of genetically engineered bacterial cells.

57 a significant protection in mice against the bacterial challenge was observed at a micromolar concent

58 r the full-length wild-type KcsA, a pH-gated bacterial channel, in membrane bilayers.

59 study of a challenging set of sequences-the bacterial chemotaxis protein CheY, the N-terminal receiv

60 ntial for fast and high-throughput screening bacterial chemotaxis.

61 w that V. fischeri, purified EroS, and other bacterial chondroitin lyases induce S. rosetta mating at

62 anscription conflict is especially bitter in bacterial chromosomes, explaining why actively transcrib

63 Several phototrophic bacterial clades are thought to have evolved before oxyg

64 rent understanding of the specificity of the bacterial class I release factors (RFs) in decoding stop

65 of these proinflammatory cytokines impaired bacterial clearance and eliminated host protection confe

66 d host cells, which indicates LegC4 augments bacterial clearance by the host immune system.

67 eas treated animals showed slightly improved bacterial clearance during the bacteremic stage compared

68 P. aeruginosa died earlier and showed slower bacterial clearance than males (P < 0.0001).

69 orably the course of infection, by improving bacterial clearance while limiting inflammation.

70 Screening of bacterial colonies to identify new biocatalytic activiti

71 th A. actinomycetemcomitans and analyzed for bacterial colonization at various time points.

72 he dose response, dynamics, and stability of bacterial colonization in the fruit fly (Drosophila mela

73 et, exposure to environmental tobacco smoke, bacterial colonization, and breastfeeding were associate

74 fication leads to a phenotypic switch in the bacterial colonizers.

75 We show that within-lineage bacterial communities are similar, but are distinct amon

76 Bacterial communities from individual egg clutches also

77 arative study on the diversity of dust-borne bacterial communities in dust storms from three distinct

78 In view of the functional importance of bacterial communities in the phyllosphere and rhizospher

79 d neuropeptide modulates the distribution of bacterial communities on the body surface during develop

80 dge about the impacts of invasive species on bacterial communities remains sparse.

81 nd Saudi Arabia) and compare them with local bacterial communities sampled on clear days, all collect

82 f the soil conditions, trees enrich variable bacterial communities to maintain the functions necessar

83 om different dust origins exhibited distinct bacterial communities, with signature bacterial taxa.

84 ts, it is unclear whether both species share bacterial communities.

85 variability in water quality parameters and bacterial community composition.

86 ell speed were most important in determining bacterial community composition.

87 t the dominant members of the amphibian skin bacterial community may be functionally important in ter

88 the beetle of mite-associated changes to the bacterial community on the carcass.

89 ation with SUCRAM affected mucosa-associated bacterial community structure along the length of the in

90 i) and the Bacteroidales (HF183 marker) with bacterial community structure determined by next-generat

91 Two major vaginal bacterial community types-one dominated by Lactobacillus

92 lf-assembling protein cages is a hallmark of bacterial compartments that function as counterparts to

93 ow here that diabetes causes a shift in oral bacterial composition and, by transfer to germ-free mice

94 ntified 3 groups of infants defined by their bacterial composition.

95 The bacterial condensin MukB and the cellular decatenating e

96 ic or prophylactic administration of defined bacterial consortia to individuals with compromised micr

97 With bacterial contamination, surgical site infections (SSI)

98 ion of stomatal aperture that is hijacked by bacterial COR to promote infection.

99 2,3-diol, and propane-1,3-diol in cheese and bacterial cultures was developed.

100 mination in pure cultures; analysis of mixed bacterial cultures, where examining one species in the p

101 associated DNABII proteins transit from the bacterial cytoplasm to the periplasm via an inner-membra

102 situ minerals, and C2H2 is known to inhibit bacterial dechlorination.

103 Biosensors can deliver the rapid bacterial detection that is needed in many fields includ

104 cess benefits the pathogen since it enhances bacterial dispersal, but is detrimental to the host.

105 Bacterial diversity (Faith phylogenetic diversity, P = .

106 lonization explained the association between bacterial diversity and asthma to a large extent.

107 rient stoichiometry is a strong predictor of bacterial diversity and composition at a regional scale.

108 in adult frogs: adult frogs that had reduced bacterial diversity as tadpoles have three times more wo

109 In contrast, adult bacterial diversity during parasite exposure is not corr

110 In cross-sectional studies increased vaginal bacterial diversity has been associated with vaginal inf

111 We find that tadpole bacterial diversity is negatively correlated with parasi

112 been demonstrated by the presence of similar bacterial DNA in both prostatic secretion and subgingiva

113 Bacterial DNA was isolated, and the 16S ribosomal RNA ge

114 This RNA is found throughout much of the bacterial domain of life, where it commonly controls the

115 apeutic materials, whether they would induce bacterial drug resistance needs to be determined, which

116 isting of the PtdIns4P-binding domain of the bacterial effector SidM.

117 he Yersinia outer protein J (YopJ) family of bacterial effectors depends on a novel acetyltransferase

118 Bacterial efflux pumps confer multidrug resistance by tr

119 increased risk for eye infections including bacterial endophthalmitis.

120 Conversion of the bacterial endosymbionts into cell organelles involved th

121 g and particle-tracking methods for studying bacterial-endothelial interaction biomechanics.

122 antisecretory therapy of diarrheas caused by bacterial enterotoxins.

123 These genes included several involved in bacterial envelope biogenesis, protein translocation, an

124 share the common function of penetrating the bacterial envelope.

125 that uses custom fluorogenic substrates for bacterial enzymes allows rapid and specific detection of

126 Bacterial enzymes are an important target for antibacter

127 developed for quantifying the activities of bacterial enzymes using a highly sensitive Fluorescence

128 Filopodia supported the phagocytic uptake of bacterial (Escherichia coli) particles by (i) capturing

129 d DNA and RNA sequence data of (i) archaeal, bacterial, eukaryotic and viral genomes from cultured or

130 the genomic and phenotypic underpinnings of bacterial evolution.

131 The bacterial flagellar filament has long been studied to un

132 ility, we look at the response of individual bacterial flagellar motors under stepwise changes in ext

133 TLR5 agonists, bacterial flagellin and engineered flagellin derivatives

134 (+) at 1.8 A resolution, providing the first bacterial FNO structure.

135 This work identifies bacterial formate oxidation and oxygen respiration as me

136 de to understand the molecular signatures of bacterial fouling.

137 the human gut microbiome also includes a non-bacterial fraction represented by eukaryotic cells and v

138 thogenic and lethal infections stemming from bacterial, fungal, and viral origins.

139 finity cytochrome bd oxidase as an essential bacterial gene product for mosquito growth.

140 determined, in part, by a trade-off between bacterial genome size and local variation in climatic co

141 parative phylogenomic analyses of fungal and bacterial genomes are consistent with an ancient origin

142 Twitching bacterial groups also produce traction hotspots, but wit

143 Transporters are essential players in bacterial growth and survival, since they are key for up

144 tion by acting either on extracellular M. tb bacterial growth only, or both intracellularly on infect

145 ize control and the cell cycle dependence of bacterial growth using multigenerational cell growth and

146 ed macrophages as well as extracellularly on bacterial growth with very low toxicity towards host mac

147 ersion rates along the reaction pathway of a bacterial homodimeric enzyme, fluoroacetate dehalogenase

148 Current models of bacterial homologous recombination (HR) posit that exten

149 TP-bound BiP that distinguishes BiP from its bacterial homologue DnaK.

150 the transcription start site and akin to its bacterial homologue NusG.

151 Based on nine bacterial host genera with at least 45 infectious viruse

152 s in both photoautotrophic and heterotrophic bacterial hosts.

153 rform at a similar level to well-established bacterial human-associated fecal-source-identification a

154 ion Time-of-Flight (MALDI-TOF) technique for bacterial identification after culture in anaerobic and

155 Paired use of mass spectrometry (MS) for bacterial identification and automated-system-based susc

156 mprehensive diagnostic information including bacterial identity and antimicrobial susceptibility, but

157 se strategies are often inadequate to detect bacterial infection and are not specific for living bact

158 Syphilis is a chronic bacterial infection caused by Treponema pallidum that is

159 tagging (IT) has revolutionised the study of bacterial infection dynamics in laboratory animal models

160 on for active drug delivery to treat gastric bacterial infection in a mouse model using clarithromyci

161 Rapid identification of bacterial infection is essential to ensure early appropr

162 During bacterial infection of macrophages, RECON antagonized ST

163 , POP2 transgenic mice are more resistant to bacterial infection than wild-type mice.

164 myositis model, [(18)F]FPTMP identified live bacterial infection without demonstrating confounding in

165 ut not GBP2 KO mice were more susceptible to bacterial infection, and small interfering RNA treated-m

166 Here we show that during bacterial infection, lysozyme is rerouted via secretory

167 d inflammatory cytokine responses to LPS and bacterial infection, POP2 transgenic mice are more resis

168 wever, their regulation and functions during bacterial infections are unclear.

169 Chronic bacterial infections associated with biofilm formation a

170 Tg(+)) mice successfully cleared spontaneous bacterial infections by PND22, the SHS-exposed Scnn1b-Tg

171 his condition is characterized by fungal and bacterial infections caused by impaired generation of TH

172 of antiretroviral therapy on risk of severe bacterial infections in people with high CD4 cell counts

173 odern patient is increasingly susceptible to bacterial infections including those due to multidrug-re

174 ontrol immune responses in the resolution of bacterial infections is critical for the development of

175 the host immune response to prevent serious bacterial infections, and represent a significant advanc

176 ity and the healthcare costs associated with bacterial infections, including the implementation of lo

177 m infections as well as to systemic and oral bacterial infections.

178 al susceptibility pattern of external ocular bacterial infections.

179 s has therapeutic potential for clearance of bacterial infections.

180 ve for the treatment of antibiotic-resistant bacterial infections.

181 mprove disease outcomes during intracellular bacterial infections.

182 in three distinct co-occurrence networks of bacterial interactions revealed both common and unique f

183 e the efficiency, strength, and stability of bacterial interactions with vascular surfaces.

184 e-independent genomes to existing genomes of bacterial isolates acquired from a sponge, sea slug, and

185 entous fungal keratitis and 24 patients with bacterial keratitis (as controls).

186 de of proliferation is widespread in diverse bacterial lineages, the underlying mechanisms are still

187 ome by Toll-like receptor (TLR) agonism with bacterial lipopolysaccharide (LPS) and the synthetic acy

188 No such difference in bacterial load or lesion size was detected in galectin-3

189 ally led to enhanced protection with reduced bacterial load, decreased chemokine expression, and redu

190 further phagocytosis, resulting in elevated bacterial load.

191 Hi phagocytosis and increased nasopharyngeal bacterial loads in ccl3(-/-) mice.

192 . typhi and develop comparable pathology and bacterial loads in the organs, demonstrating that the pl

193 these genes, we constructed a classifier for bacterial LRTI with 90% (79% CV) sensitivity and 83% (76

194 previously identified as discriminatory for bacterial LRTI.

195 However, bacterial lysis typically requires at least a 10-fold hi

196 osphorylated in vivo upon treatment with the bacterial MAMP flg22.

197 Escherichia coli is a leading cause of bacterial mastitis in dairy cattle.

198 he incorporation of this compound into model bacterial membrane.

199 hat lack such persistence selectively attack bacterial membranes without oligomerizing into visible p

200 ming size-selective pores that permeabilized bacterial membranes.

201 Neisseria meningitidis is a major cause of bacterial meningitis and sepsis worldwide.

202 he encapsulation of heterologous pathways in bacterial microcompartments might yield significant bene

203 These bacterial microcompartments share a common architecture

204 a digestion of the epithem cells and a high bacterial multiplication.

205 althy house finches, we identified 526 total bacterial operational taxonomic units (OTUs, 97% similar

206 The complexes were nontoxic to either bacterial or mammalian cells.

207 tinct from that in the well-studied nuclear, bacterial, or bacteriophage transcription systems but th

208 l fluorescent imaging of the dynamics of the bacterial outer membrane as cells divide.

209 se incorporating lipopolysaccharide, a major bacterial outer membrane component) and induce a compara

210 Here Llorente et al. show that PPIs induce bacterial overgrowth of enterococci, which, in turn, exa

211 type differentiation in vitro in response to bacterial pathogen infection.

212 Borrelia burgdorferi, the bacterial pathogen responsible for Lyme disease, modulat

213 IsdB is a receptor on the surface of the bacterial pathogen Staphylococcus aureus that extracts h

214 l for studying host-microbe interactions and bacterial pathogenesis in the upper FRT.

215 Bacterial pathogens are increasingly antibiotic resistan

216 The high prevalence of MRSA and MDR bacterial pathogens dictate the need for effective preve

217 Bacterial pathogens recruit circulating proteins to thei

218 n this review, we focus on how intracellular bacterial pathogens target innate immune signaling, the

219 ota is unable to prevent colonization by two bacterial pathogens that cause mortality in neonates.

220 for the isolation and detection of multiple bacterial pathogens via magnetic separation and SERS.

221 n, upper respiratory tract colonization with bacterial pathogens, or both.

222 with the intracellular survival of multiple bacterial pathogens.

223 stant and susceptible to infection with oral bacterial pathogens.

224 way has been shown to suppress the growth of bacterial pathogens; however, the identification and mod

225 tective postsynthetic modifications onto its bacterial peptidoglycan (PG), the coat woven into bacter

226 ion plays a detrimental role by facilitating bacterial persistence via the same mechanism of controll

227 This high antibiotic tolerance is related to bacterial persisters, a sub-population of bacteria pheno

228 nfectious site, the AMPs can be activated by bacterial phosphatase to restore the helical structure,

229 We detected organisms from 24 known bacterial phyla and one archaeal phylum.

230 as13a protein family occurs across different bacterial phyla and varies widely in both protein sequen

231 e targeting and translocation of RodZ to the bacterial plasma membrane in an obligatorily cotranslati

232 Bacterial pneumonia is a significant healthcare burden w

233 s of spatial disturbance, the ability of the bacterial population to cooperate is perturbed.

234 nship between host and microbiota, depleting bacterial populations critical for the maintenance of mu

235 give rise to abrupt and severe collapses of bacterial populations whenever they become sufficiently

236 n of genetic elements between individuals in bacterial populations.

237 This domain, which was only found in bacterial proteasomal ATPases, buries the carboxyl termi

238 Therefore, a single bacterial protein drives a multistep biochemical pathway

239 ing and will be critical for elucidating the bacterial protein transport mechanism.

240 roposed for actin filament nucleation by the bacterial proteins VopL/F.

241 hese results show that an animal manipulates bacterial quorum-sensing signals and that this modificat

242 athways may further aid in understanding the bacterial reductive dehalogenation at the molecular leve

243 Our study illustrates the elasticity of the bacterial regulatory network, which can be rewired by a

244 g of Mtb-infected macrophages and subsequent bacterial release enabled rifampicin to effectively kill

245 that includes presynaptic stimulation of the bacterial repair pathway perhaps by contributing to the

246 eased IL-6, increased nitrite, and decreased bacterial replication.

247 constantly at a concentration that prevents bacterial replication.

248 nt class of enzymes that plays a key role in bacterial resistance to antibiotics.

249 With the increasing prevalence of acquired bacterial resistance to existing classes of antibiotics

250 r to the active state of receiver domains of bacterial response regulators.

251 gs accentuate the regulatory complexities of bacterial response to antimicrobials that involve multip

252 The probe incorporated into the bacterial ribosomal RNA decoding site, fluorescently rep

253 sults propose a wide repertoire of potential bacterial RNA capping molecules, and provide mechanistic

254 the AR9 nvRNAP does not contain homologs of bacterial RNAP alpha subunits, it contains, in addition

255 establish the mechanism of TSS selection by bacterial RNAP and suggest a general mechanism for TSS s

256 The bacterial Sec-dependent system is the major protein-biog

257 This rapid determination of bacterial sensitivity to different antibiotics could hav

258 Bacterial sepsis triggers robust activation of the compl

259 Using a mouse model of bacterial sepsis, we found that the numbers of B-1a cell

260 to understand the connections between QS and bacterial sociality.

261 y profiles were obtained by HOMINGS, and 408 bacterial species and 84 genus probes were assigned.

262 strains, and they were selective over other bacterial species and eukaryotic cells, metabolically st

263 to changes in the coral pathobiome (multiple bacterial species associated with disease) and general h

264 n biomarker levels (IL-1beta and sRANKL) and bacterial species between peri-implant and periodontal s

265 cid-producing and acid-tolerating (aciduric) bacterial species within dental biofilms.

266 ed instead of methods specific to individual bacterial species.

267 change non-specialized genetic cargo between bacterial species.

268 tive whole-genome data sets from six diverse bacterial species: Staphylococcus aureus, Streptococcus

269 Bacterial sporulation allows starving cells to different

270 The precise mechanism by which the bacterial SRP receptor, FtsY, interacts with and is regu

271 th less proinflammatory cytokine response to bacterial stimulation and less human leukocyte antigen -

272 on efficiency, and it is not uncommon that a bacterial strain forms functional (Fix(+)) nodules on on

273 icrobial engineering applications, including bacterial strain typing, immunization of cultures, autoi

274 Newly isolated Enterococci faecalis bacterial strains AIM06 (DSM100702) and SR14 (DSM100701)

275 ith an increased antibiotic activity against bacterial strains possessing high level vancomycin resis

276 chnologies and tested against drug-resistant bacterial strains.

277 es induced the fixation of complement on the bacterial surface, promoted phagocytosis by macrophages

278 ificity for carbohydrate determinants on the bacterial surface.

279 culosis (Mtb) and is an essential enzyme for bacterial survival and persistence in vivo.

280 s subsp. aureus strain NCTC8325-4 attenuated bacterial survival in human whole blood ex vivo, which w

281 on of PG in Gram (-) bacteria, which aids in bacterial survival, as it prevents autolysins such as ly

282 mes that form indeterminate nodules in which bacterial symbionts undergo terminal differentiation.

283 New research documents this process in a bacterial system.

284 The abundance of a number of bacterial taxa in house dust was associated with increas

285 f the microbiota, the presence of 3 distinct bacterial taxa was correlated with protection against CD

286 stinct bacterial communities, with signature bacterial taxa.

287 Information to predict bacterial therapy outcomes was provided by pretreatment

288 catalytic process of TMA oxidation by marine bacterial Tmm and first show that NADP(+) undergoes a co

289 dded by other enzymes, including sirtuins or bacterial toxins.

290 maternal component of the disease as well as bacterial transmission to the placenta and fetus.

291 The bacterial tubulin FtsZ polymerizes to form a discontinuo

292 A particularly promising target is the bacterial two-component system.

293 n of sporulation in Bacillus subtilis and in bacterial two-component systems.

294 Conventional bacterial typing methods lack the discriminatory power t

295 f bacteria but are antagonized by IpaH9.8, a bacterial ubiquitin ligase secreted into the host cytoso

296 extreme genital inflammation and persistent bacterial vaginosis (BV); this subtype could be predicte

297 mong African women with a high prevalence of bacterial vaginosis and high adherence to PrEP, the effi

298 and which has been shown to be important for bacterial viability.

299 flies are hematophagous insects that harbor bacterial, viral and parasitic agents like Bartonella sp

300 ical (icosahedral) and nonspherical (tailed) bacterial viruses were experimentally determined by meas