ライフサイエンスコーパス: bacterial species

1 ation is fundamental to the survival of many bacterial species.

2 s the phylogenetic tree that relates all the bacterial species.

3 of nitro drugs as antibacterials in various bacterial species.

4 zyme-mediated lytic activity against several bacterial species.

5 effects and epistasis across a wide range of bacterial species.

6 ng and decay in Escherichia coli and related bacterial species.

7 enome-wide sweeps can limit diversity within bacterial species.

8 ation and horizontal gene transfer within 79 bacterial species.

9 s elegans can be induced to settle by single bacterial species.

10 762 isolates from 13 genera constituting 41 bacterial species.

11 t-transcriptional gene regulation throughout bacterial species.

12 ellins is a well recognized property of many bacterial species.

13 alternative start codon can be used in other bacterial species.

14 direct RS complexation by LS cages in other bacterial species.

15 g our hypothesis, robust coexistence of both bacterial species.

16 epression of frmRA(B) expression in numerous bacterial species.

17 rk proposed transfer methods across pairs of bacterial species.

18 l transfer of genes, both within and between bacterial species.

19 e 16 to 48 h of incubation, depending on the bacterial species.

20 ts swarming and biofilm formation in various bacterial species.

21 systems are a feature of a diverse range of bacterial species.

22 t as nitric oxide (NO) sensors among various bacterial species.

23 progressive enrichment of a small number of bacterial species.

24 lism across the major obligate intracellular bacterial species.

25 ns are conserved in KpsC homologs from other bacterial species.

26 r biotechnologically and clinically relevant bacterial species.

27 aracterize inter-individual variation in gut bacterial species.

28 le to similar MDR lineages emerging in other bacterial species.

29 n modification strategy found in a number of bacterial species.

30 otif in colicin-like ORFs from 13 additional bacterial species.

31 to be widely distributed among Gram-negative bacterial species.

32 r clindamycin treatment differed for various bacterial species.

33 dious Gram-negative, atypical, and anaerobic bacterial species.

34 d in polyreactive clones recognizing various bacterial species.

35 s of synthesis of HPF-like proteins in other bacterial species.

36 a family of NAPs that are widespread across bacterial species.

37 evelop a novel assay for profiling different bacterial species.

38 he generation of comparable models for other bacterial species.

39 of thiazolyl peptide gene clusters in other bacterial species.

40 NA transformation and genetic engineering of bacterial species.

41 family and hundreds of nitrogen (N2)-fixing bacterial species.

42 illi and concomitant overgrowth of anaerobic bacterial species.

43 highly diverse and widely distributed among bacterial species.

44 lthy/cancerous liver tissues and between the bacterial species.

45 nderstand surface motility patterns of other bacterial species.

46 ell conserved among phylogenetically distant bacterial species.

47 cated in the virulence of several pathogenic bacterial species.

48 plaques were analyzed for the presence of 18 bacterial species.

49 , which included all coding sequences of 100 bacterial species.

50 presence has also been confirmed in several bacterial species.

51 gene for identification, we cultured 329 new bacterial species.

52 ed instead of methods specific to individual bacterial species.

53 e levels of genetic cohesion associated with bacterial species.

54 change non-specialized genetic cargo between bacterial species.

55 in Mie scatter spectra created by different bacterial species.

56 isolated from various Gram (+) and Gram (-) bacterial species.

57 ingerprints for identification of individual bacterial species.

58 d define speciation trajectories in multiple bacterial species.

59 thod for the counting and differentiation of bacterial species.

60 nd the corresponding sensory network in many bacterial species.

61 te small ecosystems that accommodate several bacterial species.

62 hat Nus factor autoregulation occurs in many bacterial species.

63 escence signal profile that is unique to the bacterial species.

64 l wall linkage has not been described in any bacterial species.

65 arding (1) antimicrobial effect on different bacterial species, (2) efficacy on biofilms, and (3) eff

66 lain the experimental data on four different bacterial species [4-7].

67 identification panel (BCID) that included 19 bacterial species, 5 Candida spp., and 4 antimicrobial r

68 rated computational pipeline for quantifying bacterial species abundance and strain-level genomic var

69 l donors, we found that correlations between bacterial species abundances and transit times are diet

70 using the phenotypic profiles of 40 diverse bacterial species across more than 60 growth conditions.

71 n of axenic embryos at 1 dpf with individual bacterial species Aeromonas veronii or Vibrio cholerae w

72 rmatitis, and antibiotics specific for these bacterial species almost completely reversed dysbiosis a

73 y profiles were obtained by HOMINGS, and 408 bacterial species and 84 genus probes were assigned.

74 uctures of DfsB homologues from a variety of bacterial species and a surprising version present in th

75 ghts into the key community role of specific bacterial species and also indicates the therapeutic pot

76 ition of the membrane, which differs between bacterial species and can be heterogeneous even within a

77 This suggests changes to the ways we define bacterial species and describe bacterial communities.

78 Depending on the bacterial species and environments, the acyl chain numbe

79 strains, and they were selective over other bacterial species and eukaryotic cells, metabolically st

80 our inability to genetically manipulate new bacterial species and experimentally assess the function

81 differences in the alpha diversity of faecal bacterial species and found that richness and diversity

82 These findings suggest that bacterial species and functional genes absent in the gut

83 years of antibiotic resistance data from 10 bacterial species and genera of clinical interest from o

84 w growth inhibitors and their targets across bacterial species and in higher organisms.

85 d underlying mechanisms of action vary among bacterial species and remain incompletely understood.

86 preserve the physiological state of selected bacterial species and seawater bacterial community in co

87 ein interactions (PPIs) across 349 different bacterial species and strains to determine their conserv

88 onocolonized mice with each of 53 individual bacterial species and systematically analyzed host immun

89 t RNase HI.SSB complexes are present in many bacterial species and that retaining the interaction is

90 a demonstration, we correctly identified the bacterial species and their antimicrobial susceptibility

91 based on the relative abundance of only two bacterial species and two antibiotic resistance (AR) gen

92 ndent interactions with aggressive competing bacterial species and viruses can induce production of R

93 reportedly vary between RNAPs from different bacterial species and, probably, different types of tran

94 Nus factors are broadly conserved across bacterial species, and are often essential for viability

95 gut microbes), animals colonized by a single bacterial species, and conventionally reared animals, an

96 ost stringent cut-off can represent multiple bacterial species, and that at least for the case of Str

97 expressed on the surface of a vast number of bacterial species, and their role in surface adhesion is

98 PHMB, we observed cell entry into a range of bacterial species, and treated bacteria displayed cell d

99 six bacterial phyla, 17 bacterial genera, 23 bacterial species, and two genera of viruses.

100 BefA are present in several human-associated bacterial species, and we show that they have conserved

101 the genes coding the DNA uptake system, most bacterial species appear non-transformable under laborat

102 d that T3SS inner rod proteins from multiple bacterial species are also detected.

103 ious studies have demonstrated that multiple bacterial species are associated with lesions, with spir

104 Many bacterial species are highly social, adaptively shaping

105 How and which relevant bacterial species are involved in tumor immunosurveillan

106 The classical Bordetella bacterial species are known to be auxotrophic for nicoti

107 ilayers of 21 distinct lipid A types from 12 bacterial species are modeled and simulated to investiga

108 tective factors and mechanisms of individual bacterial species are not fully characterized.

109 On the basis of genomic evidence, 116 other bacterial species are putative DAR producers, among them

110 le and fast detection and differentiation of bacterial species are required, for instance, in medicin

111 drug action and its effect on FtsZ in other bacterial species are unclear.

112 sts are conducted simultaneously to identify bacterial species associated with a phenotype of interes

113 to changes in the coral pathobiome (multiple bacterial species associated with disease) and general h

114 The main bacterial species associated with peri-implantitis are r

115 Presence of 40 periodontal bacterial species at baseline and 3 months was semiquant

116 ne the cause, the prevalence and quantity of bacterial species at the infected and uninfected sites w

117 ted into the peptidoglycans (PGs) of diverse bacterial species at the sites of PG biosynthesis, allow

118 oach for "omics-driven" classification of 15 bacterial species at various taxonomic levels achieving

119 , yet prediction of unknown classes, such as bacterial species, at upper hierarchy levels may be suff

120 ation experiments with eight health-relevant bacterial species (Bacteroides thetaiotaomicron, Campylo

121 germ-free mice, which are colonized with two bacterial species, Bacteroides thetaiotaomicron and Bifi

122 and a machine learning algorithm to identify bacterial species based on melt-curve profiles of the 16

123 n biomarker levels (IL-1beta and sRANKL) and bacterial species between peri-implant and periodontal s

124 ical evidence to support exchange of vaginal bacterial species between women and the concept that BV

125 gase C (LigC) complex also co-exists in many bacterial species but its function is unknown.

126 Gardnerella vaginalis is a predominant bacterial species, but BV is also associated with other

127 Bacteriophages (phages) infect many bacterial species, but little is known about the diversi

128 d to transfer regulatory information between bacterial species, but the paucity and distributed natur

129 the applicability of this approach to other bacterial species by predicting sRNA-mRNA binding region

130 pendent on the initial identification of the bacterial species by use of a kmer-based approach.

131 loying only seven primer sets, more than 100 bacterial species can be identified.

132 Individual bacterial species can be sorted with up to 96% efficienc

133 We find that different bacterial species can increase the response to one drug

134 Synergistical bacterial species can perform more varied and complex tr

135 However, about 95% of bacterial species cannot be cultured in labs.

136 Across bacterial species, chemoreceptor arrays (both transmembr

137 Many bacterial species colonize surfaces and form dense 3D st

138 the microbial metabolic exchange between two bacterial species, commensal Streptococcus gordonii and

139 by the diagnosis of infections caused by two bacterial species commonly associated with PJI, namely,

140 fferences in carriage prevalence of the four bacterial species compared with controls (n = 72 analyze

141 Whilst most bacterial species contain a single ClpP protein that is

142 rch of sequenced genomes, we found that many bacterial species contain putative ethylene receptors.

143 Because at least 777 different bacterial species contain the genetic requirements of th

144 A gradient of bacterial species (difference of the sum of the relative

145 Within each bacterial species, different strains may vary in the set

146 ted on plasmids or on the chromosome from 53 bacterial species distributed across different ecologica

147 erns but still conferred distinct effects on bacterial species diversity and microbiota stability lar

148 The bacterial species diversity was significantly reduced by

149 ze daily quantitative measurements of 11 key bacterial species during metronidazole treatment for 15

150 ate that the abundance of specific commensal bacterial species enhances the anti-cancer activity of i

151 Here, we identified two bacterial species, Enterococcus hirae and Barnesiella in

152 idyl ester dilution assays) and 9 intestinal bacterial species (Escherichia coli, Lactobacillus acido

153 (Danio rerio and Caenorhabditis elegans) and bacterial species (Esherichia coli, Bacillus cereus, and

154 that are effective against a broad range of bacterial species, especially multidrug resistant ones.

155 hly important target for PF orthologs of the bacterial species examined.

156 Although it is widely appreciated that some bacterial species express glycosidases, previous studies

157 haracterization of several hundred commensal bacterial species facilitated studies of the microbiota

158 animal guts are largely composed of resident bacterial species, forming communities that often provid

159 ously regulated via an RNA regulator in many bacterial species; four apparently distinct regulators h

160 ll possible pairwise interactions between 67 bacterial species from 8 different environments: 2,211 p

161 mass to confirm the ability to detect intact bacterial species from a swab.

162 oach to healthy individuals, we isolated 137 bacterial species from characterized and candidate novel

163 and its ability to differentiate all tested bacterial species from each other, including members of

164 In vitro culture of select bacterial species from respiratory specimens has been us

165 iches in different bloom phases, and certain bacterial species from the Pseudoalteromonadaceae might

166 ed Clostridium immunis, a previously unknown bacterial species from this family, that-when administer

167 sing orthogonal Cas9 proteins from different bacterial species fused to different fluorescent protein

168 d to investigate their associations with the bacterial species, genotypes, and epidemiological origin

169 m Escherichia coli, and recent work in other bacterial species has isolated and quantified different

170 Closely related bacterial species have a tendency to exhibit a similar r

171 The protein interactomes of several bacterial species have been completed, including several

172 interactome studies: more than six different bacterial species have been the subjects of comprehensiv

173 sed gene content to show that many prevalent bacterial species have population structure that correla

174 In addition to FliI homologs from diverse bacterial species, high affinity binding was also observ

175 -TOF MS) has become the standard for routine bacterial species identification due to its rapidity and

176 l agent of dental caries and one of the many bacterial species implicated in infective endocarditis.

177 ly episodes on the complex interplay between bacterial species implicated in otitis media.

178 We performed DNA sequence analyses to detect bacterial species in 945 CF sputum samples that had been

179 terium nucleatum is among the most prevalent bacterial species in colorectal cancer tissues.

180 However, given the near-exclusive focus on bacterial species in establishing these protective benef

181 S. simulans was the predominant bacterial species in fetal brain after hypoxia, but was

182 spp. population imbalances relative to other bacterial species in gut systems.

183 f sulfhydryl sites on EPS molecules of other bacterial species in order to determine the effect of ba

184 achieved 95% accuracy in differentiating 89 bacterial species in our library using leave-one-out cro

185 They raise the possibility that other bacterial species in these communities modulate the abil

186 quences, suggesting a high number of unknown bacterial species in these habitats.

187 calis is one of the most frequently isolated bacterial species in wounds yet little is known about it

188 Here, we identified human symbiont bacterial species, in particular Bifidobacterium adolesc

189 been identified and characterized in diverse bacterial species, including human pathogens.

190 In a number of bacterial species, including Streptococcus pneumoniae, t

191 ere selective for M. tuberculosis over other bacterial species, including the closely related Mycobac

192 ger that appears to be essential in multiple bacterial species, including the Gram-positive facultati

193 genome sequences of several plant-associated bacterial species indicate the presence of multiple chem

194 Different bacterial species induce distinct immune cell population

195 of Staphylococcus aureus strains, and other bacterial species inhibited epithelial cell migration.

196 colonization resistance to VRE, the specific bacterial species involved remain undefined.

197 The genome of about 10% of bacterial species is divided among two or more large chr

198 descent of progeny; however, a truly clonal bacterial species is extremely rare.

199 , which drives locomotion in a wide range of bacterial species, is more dynamic than previously belie

200 wage and identified resistance in individual bacterial species isolated from environmental water sour

201 rastructure can be a source of iron ions for bacterial species, leading to microbiologically influenc

202 ing environments and of a novel biodegrading bacterial species, likely a new genus in the order Bacil

203 elaborate fruiting body development of this bacterial species, M. xanthus has served as a model orga

204 re abundant in both pathogenic and commensal bacterial species, mediate early attachment to host cell

205 witches that are transferable across diverse bacterial species, modulating either transcription or tr

206 have implications for other biofilm-forming bacterial species.Most bacteria live in biofilms, surfac

207 ubstantially disparate microenvironments for bacterial species not from the Staphylococcus genus.

208 ical sutures have antimicrobial activity for bacterial species of direct relevance to postoperative i

209 transformation of a pORTMAGE plasmid allows bacterial species of interest to become an efficient hos

210 Our analysis identifies 178 bacterial species, of which 51 were not found using shot

211 The bacterial species or communities underlying BCO pathogen

212 predicted dual binding modes across multiple bacterial species, our approach opens up new possibiliti

213 re to the TopoI-CTD found in the majority of bacterial species outside Actinobacteria, including Esch

214 2014) find they resist infection by multiple bacterial species pathogenic to humans, Drosophila and C

215 subject and analyzed for their content of 20 bacterial species/phylotypes through the RNA-oligonucleo

216 However, unlike E. coli, some bacterial species possess multiple FNR proteins that pre

217 the host innate immune system and almost all bacterial species possess systems that defend against th

218 rtantly, our findings show that sRNAs across bacterial species potentially may qualify as targets of

219 unity, Daillere et al. (2016) identified two bacterial species potentiating the anti-tumor effect of

220 ct humans is largely dependent on protective bacterial species present in the microbiome.

221 near-complete genome reconstruction of five bacterial species previously found in biomass-degrading

222 which acidogenic, aciduric, and acid-adapted bacterial species promote a pathogenic environment, lead

223 composed of diverse populations of commensal bacterial species, provides resistance against colonizat

224 ns (ANR, PP_3233, and PP_3287) from a single bacterial species, Pseudomonas putida KT2440, have been

225 The adhesion behaviors of five bacterial species, Pseudomonas putida KT2440, Salmonella

226 In many bacterial species, quorum sensing controls virulence fac

227 d viable P. acnes was one among 10 different bacterial species recoverable in culture.

228 is capable of detecting 4mC directly for any bacterial species regardless of whether an assembled gen

229 ing for both Gram-positive and Gram-negative bacterial species requires at least 48-72 h.

230 o a broad, but specific, array of individual bacterial species-requires the transcription factor Rorg

231 ally distinct surfaces, suggesting that this bacterial species responds to mechanical properties of i

232 hylococcus epidermidis is one of the primary bacterial species responsible for healthcare-associated

233 , comparative analysis of genomes from 1,167 bacterial species reveals that rrn copy number predicts

234 Many bacterial species show high intraspecific diversity of a

235 In contrast, the bacterial species showed little protein synthesis using

236 A comparison of 11 abundant gut bacterial species showed that the gene content of strain

237 creen to study around 200 effectors from six bacterial species, showing that over 30% of them interac

238 Phylogenetic analysis reveals other bacterial species simultaneously encode TFP, the Chp sys

239 any cases, gene blocks are conserved between bacterial species, sometimes as operons, when genes are

240 for the identification of five Gram-positive bacterial species (Staphylococcus aureus, Staphylococcus

241 tive whole-genome data sets from six diverse bacterial species: Staphylococcus aureus, Streptococcus

242 gy methods, the detailed study of individual bacterial species still relies on having pure cultures i

243 The cariogenic bacterial species Streptococcus mutans metabolizes sucro

244 ies of Ti-Cu alloy against the oral specific bacterial species, Streptococcus mutans and Porphyromona

245 reasonably predict fluxomes as a function of bacterial species, substrate types, growth rate, oxygen

246 r, it has been observed that strains of some bacterial species, such as Acinetobacter baumannii strai

247 The emergence of antibiotic-resistant bacterial species, such as vancomycin-resistant enteroco

248 Many bacterial species swim by rotating single polar helical

249 frequencies of 40-4000 per million for each bacterial species tested.

250 ntified far more alcohol-drinking associated bacterial species than traditional methods.

251 ylogenomics and metabolic modeling to detect bacterial species that are evolving by gene loss, with t

252 o shapes gut bacterial ecology, resulting in bacterial species that are more effective for inflammaso

253 Ongoing studies are identifying commensal bacterial species that can be developed into next-genera

254 n artificial community composed of human gut bacterial species that directly correlate with recovery

255 Clostridium acetobutylicum is a bacterial species that ferments sugar to a mixture of or

256 of Magnetosprillum gryphiswaldense MSR-1, a bacterial species that is amendable to genetic mutations

257 Haemophilus parasuis is a diverse bacterial species that is found in the upper respiratory

258 se of eukaryotic OGTs are predicted for many bacterial species, the cellular roles of these OGTs are

259 provides a competitive advantage to certain bacterial species, the presence of a larger number of ch

260 In diverse bacterial species, the turnover and processing of many R

261 aintenance, and eradication of BV-associated bacterial species, thereby improving treatment outcomes.

262 h macrophages were largely activated by both bacterial species, they lack the phagocytic activity dem

263 chain, was found to incorporate into several bacterial species through cell wall remodeling, with par

264 PS molecules may vary significantly from one bacterial species to another, thus it is crucial to quan

265 system (T6SS) is used by many Gram-negative bacterial species to deliver toxic effector proteins int

266 IV effector proteins from six Gram-negative bacterial species to interact with the eukaryotic plasma

267 microbial resistance (AMR), the ability of a bacterial species to resist the action of an antimicrobi

268 infection, and the contributions of specific bacterial species to resistance are being discovered and

269 To test this, we exposed diverse bacterial species to sublethal concentrations of a cell

270 T6SS) is a versatile weapon deployed by many bacterial species to target either host cells or rival b

271 guts are often colonized by host-specialized bacterial species to the exclusion of other transient mi

272 Fifty-two of the 65 urine samples (80%) grew bacterial species using EQUC, while the majority of thes

273 We perform genetic screens in two bacterial species using three chemotherapeutic drugs: 5-

274 Relative abundance of bacterial species was highly comparable between sampling

275 No cross-reactivity with isolates from other bacterial species was observed.

276 ty of the method for analysis of mixtures of bacterial species was shown with ternary mixtures of Bac

277 By borrowing information from neighboring bacterial species, we are able to improve the statistica

278 tructural and functional conservation across bacterial species, we show that vacuole lysis is not a c

279 Levels of bacterial species were already relatively low at baselin

280 In 1,188 subgingival plaque samples, 11 bacterial species were assessed at baseline, including A

281 In this study, five bacterial species were cultured in M9 minimal media cont

282 After 24 h of infection, 1228 and 1109 bacterial species were identified in the uninfected and

283 Eleven bacterial species were identified.

284 When these bacterial species were placed in close spatial proximity

285 Unknown bacterial species were probabilistically assigned with 1

286 ance, MscL, is found in the vast majority of bacterial species, where it serves as an emergency relea

287 e m(6)A/A ratio in mRNA from a wide range of bacterial species, which demonstrates that m(6)A is an a

288 real-time metabolic interactions between two bacterial species, which would not otherwise be achievab

289 he statistical power of detecting associated bacterial species while controlling the FDR at desired l

290 We selected 20 bacterial species with 25 patterns of acquired resistanc

291 reveals the genome-wide locations of 4mC for bacterial species with an available assembled reference

292 ions may be a general feature of free-living bacterial species with huge populations in highly mixed

293 vealed after a 24-h recovery period: several bacterial species with metabolic dependency or physical

294 inducing the replacement of thermosensitive bacterial species with more thermotolerant forms.

295 dependent biofilm formation in two different bacterial species with no apparent bactericidal or bacte

296 cid-producing and acid-tolerating (aciduric) bacterial species within dental biofilms.

297 sregulated neutrophilic response to specific bacterial species within the subgingival plaque biofilm.

298 esignations involving clinically significant bacterial species would benefit clinical microbiologists

299 ers for Pel biosynthesis are present in >125 bacterial species, yet little is known about how this bi

300 Previous experiments using a single bacterial species yielded a delay in the onset of transm