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   1 usiformis expressed on the surface of the fd bacteriophage.                                          
     2 late cycle, and reduce infection activity of bacteriophage.                                          
     3  self-assembly of genetically engineered M13 bacteriophage.                                          
     4  a 936-type Lactococcus lactis subsp. lactis bacteriophage.                                          
     5 oducts conferred resistance to a WTA-binding bacteriophage.                                          
     6 y of DNA modifications found in bacteria and bacteriophages.                                         
     7 ing motor assembly, as predicted for several bacteriophages.                                         
     8 each other and from previously described RNA bacteriophages.                                         
     9 iruses, including the herpesviruses and many bacteriophages.                                         
    10 ems benefit bacteria by protecting them from bacteriophages.                                         
    11 promote DNA transfers between eukaryotes and bacteriophages.                                         
    12 ontext of the arms race between bacteria and bacteriophages.                                         
    13 vention, including vaccines, probiotics, and bacteriophages.                                         
    14 ses frequently encoded in the genome of many bacteriophages.                                         
    15 nting protein similar to those found in many bacteriophages.                                         
    16 proteins or cross-linking, as occur in other bacteriophages.                                         
    17 ymptoms of CDI showed a complex signature of bacteriophages.                                         
  
    19 otably in the form of viral pathogens termed bacteriophages (8-12) , which are the most abundant repl
    20 bov1, is derepressed by the dUTPase (Dut) of bacteriophage 80alpha (Dut80alpha) and its phage varphi1
    21 guanosine, was found in the Escherichia coli bacteriophage 9 g, as predicted from the presence of hom
    22 nal import (TAxI), that enriched recombinant bacteriophage accumulation and delivered protein cargo i
    23 aging motors, including those of dsDNA/dsRNA bacteriophages, adenoviruses, poxviruses, herpesviruses,
  
    25 galactosylated WTA was directly required for bacteriophage adsorption and that mutant WTA lacked appr
    26 s spectrometry to monitor the replication of bacteriophage after it is used to infect samples thought
    27 idermidis, Saccharomyces cerevisiae, and MS2 Bacteriophage after light treatment of a medical grade s
  
    29 properties were then used to isolate His6-T7 bacteriophage and His6-GroEL directly from cell lysates.
    30 ired through horizontal gene transfer from a bacteriophage and is classified as an atypical A-family 
    31 alyzed a deep DNA sequence dataset of active bacteriophages and available metagenomic datasets of the
    32 cs studies and discusses the contribution of bacteriophages and eukaryotic viruses to human health.  
    33 ource tracking (MST) tools using enterococci bacteriophages and evaluated their performance with univ
  
  
    36 eformed protein capsid exemplified by tailed bacteriophages and herpesviruses.IMPORTANCE Adenovirus i
    37 e proteins related to D10 in archaebacteria, bacteriophages and in viruses known to infect a range of
  
    39 RISPR-Cas systems defend prokaryotes against bacteriophages and mobile genetic elements and serve as 
  
  
  
    43  systems capture DNA fragments from invading bacteriophages and plasmids and integrate them as spacer
  
  
    46  have never before been reported in packaged bacteriophages and their phylogeny, distribution and seq
    47 primarily to be part of an arms race between bacteriophages (and other genomic parasites) and their h
    48 ases to defend against infection by viruses, bacteriophages, and mobile elements, while these foreign
  
  
  
  
  
  
    55 e specificity and rapid-acting properties of bacteriophages as a potential prophylaxis therapy for ch
    56  performed human subject studies using three bacteriophages as pathogenic virus surrogates: nonenvelo
    57 ings provide novel insights into the role of bacteriophages as potentially pathogenic for mammals and
  
    59 itous in nature, because they are present in bacteriophage, bacteria, archaea, and simple and complex
  
    61 roof-of-concept study was conducted using T2 bacteriophage-based biosensors for electrochemical detec
    62 hat low concentrations (0.09 mg/mL of the R5 bacteriophage, below the concentration range used in oth
    63 nomic diversification of naturally occurring bacteriophages by analyzing the full genomic sequences o
  
  
    66 ture which is composed of functionalized M13 bacteriophage can simultaneously improve the sensitivity
  
    68  protocol to the 3.3-A map of the mature P22 bacteriophage capsid, a large and complex macromolecular
  
  
  
    72 ing a WIG1 tethering system based on the MS2 bacteriophage coat protein and a reporter construct cont
    73 el, we examined the effects of exposure to a bacteriophage cocktail on intestinal permeability and re
  
  
  
  
    78 ysis, we identified disease-associated viral bacteriophage contigs after subtraction of age-associate
  
    80 nase from the Geobacillus stearothermophilus bacteriophage D6E shows a unique relative orientation of
  
    82 eaving the polysialic acid moiety, using the bacteriophage-derived enzyme endoneuraminidase N, comple
  
  
  
  
  
  
    89 orm of the host RNAP can also be targeted by bacteriophage-encoded transcription regulatory proteins.
    90  temperature during infection, the truncated bacteriophage endolysin CHAPK and the staphylococcal bac
    91     As an alternative mode of treatment both bacteriophage endolysins and bacteriocins have been show
  
    93  to detect different bacteria using specific bacteriophages engineered with gene encoding for appropr
    94 n of Escherichia coli (E. coli) using the T7 bacteriophages engineered with lacZ operon encoding for 
  
    96 quimolar mixtures of genomic DNA from lambda bacteriophage, Escherichia coli (strain K12, MG1655) and
  
  
    99 ate immunity centered on Argonaute proteins, bacteriophage exclusion, and new types of CRISPR-Cas sys
   100 resent a new approach to phage therapy where bacteriophages exert selection for MDR bacteria to becom
  
   102 ases, DNA site-specific recombinases used by bacteriophages for integration and excision of their DNA
   103 l observations of single-cell lysis times in bacteriophage [Formula: see text] Here, lysis of an infe
   104 than one-half of all people, a common set of bacteriophages found in 20-50% of individuals, and a set
  
  
   107 rge terminase nuclease from the thermophilic bacteriophage G20c show that it is most similar to the R
   108 ial RNAP to allow the temporal regulation of bacteriophage gene expression often target the activity 
   109 ine nucleotide biosynthetic pathway using T4 bacteriophage genes to achieve approximately 63% replace
  
  
   112 a-proteobacteria and are encoded on multiple bacteriophage genomes, also accumulate in the predivisio
   113 C-terminal domain, that are uninterrupted in bacteriophage genomes, enriched with eukaryotic protease
   114 standing the structure and origin of natural bacteriophage genomic diversity is important in elucidat
  
   116 roperties using a MST toolbox containing two bacteriophage groups (phage infecting GB-124 and ARABA-8
  
  
   119 ted proteins present in various bacteria and bacteriophages have diverged from msRNAPs before the Las
  
   121 binding peptide (His Pro Gln: HPQ) gives M13 bacteriophage high selectivity for the streptavidin.    
  
   123 manifest as a complex of insertions around a bacteriophage HK97 gp5-like domain, which gives rise to 
   124 amine against murine norovirus (MNV) and MS2 bacteriophage in secondary effluent MWW and phosphate bu
  
  
  
   128 RT-PCR)-based screening for two specific RNA bacteriophages in stool samples from a longitudinal coho
  
   130 role of bacteriophages with RNA genomes (RNA bacteriophages) in these processes is poorly understood,
   131 or commensals, including bacteria, fungi and bacteriophages, in modulating skin functions in health a
  
   133 f a unique protein product resulting from T7 bacteriophage infection of E. coli, illustrating that na
   134 ch as twitching motility, biofilm formation, bacteriophage infection, surface attachment, virulence, 
  
  
  
  
   139 s with higher restriction efficiency against bacteriophage infections exhibit a higher rate of self-r
  
  
   142 ic diversity is important in elucidating how bacteriophages influence the mortality rates and composi
  
   144 g protein [gene product 32 (gp32)] of the T4 bacteriophage is a central integrating component of the 
  
  
   147 ctural tail protein of Klebsiella pneumoniae bacteriophage KP32, and is responsible for adhering the 
   148  as an example the directed evolution of the bacteriophage lambda cI TF against two synthetic bidirec
   149 witches for orthogonal logic gates, based on bacteriophage lambda cI variants and multi-input promote
   150 tions affects the lysis-lysogeny decision of bacteriophage lambda despite variable infection times be
  
  
  
  
   155  relief of TI by CI or Cro repressors in the bacteriophage lambda PR-PRE system show strong relief of
   156 component of the Red recombination system of bacteriophage lambda that promotes a single strand annea
   157 ightly regulated pathway for the excision of bacteriophage lambda viral DNA out of the E. coli host c
  
   159 he bacterium Escherichia coli and its virus, bacteriophage lambda, is paradigmatic for gene regulatio
  
  
  
  
  
   165 argeting various positions in the genomes of bacteriophages lambda, T5, T7, T4 and R1-37 and investig
   166 PIs), such as SaPI1, exploit specific helper bacteriophages, like 80alpha, for their high frequency m
   167 oduce gene transfer agents (GTAs), which are bacteriophage-like particles that exclusively package pi
  
   169 s that bacterial components, metabolites, or bacteriophages mediate many of the effects of FMT, and t
   170 vo, and are applicable to both bacterial and bacteriophage-mediated laboratory evolution platforms.  
  
  
   173  the viral genome, as exemplified by the RNA bacteriophage MS2 and as proposed for other RNA viruses 
   174 sed RNA oligomer segments from the genome of bacteriophage MS2 to UV254, simulated sunlight, and sing
   175 surrogate viruses murine norovirus (MNV) and bacteriophage MS2 under identical experimental condition
   176 xtrinsic controls (phocine herpesvirus 1 and bacteriophage MS2) were included to ensure extraction an
   177 f of concept for the label-free detection of bacteriophage MS2, a model indicator of microbiological 
   178 igated the inactivation of Escherichia coli, bacteriophage MS2, and Bacillus subtilis spores as surro
   179 single-stranded RNA (ssRNA) viruses, such as bacteriophage MS2, co-assemble their capsid with the gen
  
  
   182 ynamics of negatively charged viruses (i.e., bacteriophages MS2, fr, GA, and Qbeta) and polystyrene n
   183 ruses (MHV and varphi6) and two nonenveloped bacteriophages (MS2 and T3) in raw wastewater samples.  
   184 ystematically studied the adsorption of four bacteriophages (MS2, fr, GA, and Qbeta) to five model su
  
   186 e exception of the tailed viruses related to bacteriophages of the order Caudovirales and the familie
   187 h a management strategy, we isolated a lytic bacteriophage, OMKO1, (family Myoviridae) of Pseudomonas
  
   189  can be transferred into chromosomes by: (i) bacteriophage P1 transduction; and (ii) transformation o
   190 ural evidence that the portal protein of the bacteriophage P22 exists in two distinct dodecameric con
  
   192 acteriophage T7 tail protein gp11 and gp4 of bacteriophage P22, but TTPA contains an additional antip
  
   194 ese methods to new cryoEM maps of the mature bacteriophage P22, reconstructed without imposing icosah
   195 harge-directed, orientated immobilization of bacteriophage particles on carbon nanotubes was achieved
  
  
  
  
  
  
  
  
  
   205 he three-way junction (3WJ) of the pRNA from bacteriophage phi29 DNA packaging motor were examined pr
  
  
  
   209 ction of Pseudomonas aeruginosa by the giant bacteriophage phiKZ is resistant to host RNA polymerase 
  
  
  
   213 identify partial genome sequences of 122 RNA bacteriophage phylotypes that are highly divergent from 
   214 bI expression caused restriction of incoming bacteriophage/plasmid DNA and endogenous chromosomal DNA
  
  
  
   218 nd another member of the structural lineage, bacteriophage PM2, extends to the capsid organization (p
   219 e characterized the inactivation kinetics of bacteriophage PR772, a member of the Tectiviridae family
  
   221 ses have been observed in the genomic DNA of bacteriophages, prokaryotes, and eukaryotes that play a 
  
   223 detailed interactions between SP and CP in a bacteriophage, providing unique insights into macromolec
  
  
  
   227  could be effectively replaced by those from bacteriophage RB69, and could carry out chromosomal DNA 
   228 s to identify an expansive, diverse group of bacteriophages related to crAssphage and predict the fun
  
   230 netic modification of functional peptides of bacteriophage results in structures that can be used as 
  
  
  
   234 te atomic model of the headful DNA-packaging bacteriophage Sf6 at 2.9 A resolution determined by elec
  
   236 is a mixture of three classes: a set of core bacteriophages shared among more than one-half of all pe
  
   238 he structural particle of bacterial viruses (bacteriophages) specifically infecting Gram-positive bac
  
  
   241 n of molecular networks consisting of entire bacteriophage structure, displaying specific peptides, d
   242 eralizing peptide component displayed on the bacteriophage surface, we found that low concentrations 
   243     In a process called sigma appropriation, bacteriophage T4 activates a class of phage promoters us
   244 ingle-stranded DNA-binding protein gp32 from bacteriophage T4 and a strand-displacing DNA polymerase.
   245 al for efficient homologous recombination in bacteriophage T4 and is the functional analog of the euk
  
   247 ty DNA polymerases such as pol delta and the bacteriophage T4 DNA polymerase replicating 8-oxo-G in a
  
  
  
   251 lf of the ribosomes translating a particular bacteriophage T4 mRNA bypass a region of 50 nt, resuming
  
  
  
  
   256 in Ocr (overcome classical restriction) from bacteriophage T7 acts as a mimic of DNA and inhibits all
   257 pproximately 650-kDa functional replisome of bacteriophage T7 assembled on DNA resembling a replicati
  
  
  
   261 talytic activity is known to increase during bacteriophage T7 infection, reflecting the expression of
   262  The single-subunit RNA polymerase (RNAP) of bacteriophage T7 is able to perform all steps of transcr
  
   264 expression levels in 6,348 experiments using bacteriophage T7 polymerase to synthesize messenger RNA 
  
   266 proach to visualize this coordination in the bacteriophage T7 replisome by simultaneously monitoring 
   267  developed to control the expression of both bacteriophage T7 RNA polymerase and recombinant gene(s) 
   268 tal structure of TTPA resembles those of the bacteriophage T7 tail protein gp11 and gp4 of bacterioph
  
   270 )CACONH, and (H)CBCANH spectra of the 20 kDa bacteriophage tail-tube protein gp17.1 in a total time o
  
   272  that YonO is a bona fide RNAP of the SPbeta bacteriophage that specifically transcribes its late gen
   273 found in 20-50% of individuals, and a set of bacteriophages that are either rarely shared or unique t
   274 f tailless, icosahedral, membrane-containing bacteriophages that can be divided into two groups by th
   275 sly, we discovered small proteins encoded by bacteriophages that inhibit the CRISPR-Cas systems of th
  
  
   278 is cell rescue program, and the induction of bacteriophages, the movement of pathogenicity islands, a
  
  
  
   282  bacterial virulence factors, utilization of bacteriophages to kill bacteria, and manipulation of the
   283 complex molecular architectures ranging from bacteriophages to nuclear pores, cilia, and synaptonemal
   284 t in the well-studied nuclear, bacterial, or bacteriophage transcription systems but that similaritie
   285 ments and occurs primarily by conjugation or bacteriophage transduction, with the latter traditionall
   286 rther, this material rapidly inactivates MS2 bacteriophage under sunlight illumination, oxidizes vari
  
   288 he ATPase ring in the DNA packaging motor of bacteriophage varphi29 is regulated by an arginine finge
  
  
   291 of the C-dots and the DNA fragment of lambda bacteriophage was performed, and the DNA binding resulte
   292 elbrueckii subsp. bulgaricus (Ldb)-infecting bacteriophages, was shown to hydrolyze, besides the simp
  
  
  
  
  
  
   299 we report a metagenomic analysis of purified bacteriophage WO particles of Wolbachia and uncover a eu
  
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