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1 represents any aromatic amino acid and B any basic amino acid.
2 )P2-(Ser)P1(Arg) P1'(Ala)), where X is a non-basic amino acid.
3 interaction motif (PIP box) and an adjacent basic amino acid.
4 ard mixtures containing acidic, neutral, and basic amino acids.
5 of such singly charged complexes except for basic amino acids.
6 es with substrate specificity for a range of basic amino acids.
7 rate polypeptides primarily between pairs of basic amino acids.
8 n signal of TBX5, we searched for cluster of basic amino acids.
9 and a broadened activity for cleavage after basic amino acids.
10 racellular, juxtamembrane region composed of basic amino acids.
11 hat they all possess a subdomain composed of basic amino acids.
12 n can also accept Gln and Asn in addition to basic amino acids.
13 polyprotein precursor at sites following two basic amino acids.
14 signal (NLS), composed of short stretches of basic amino acids.
15 to the N terminus released peptides rich in basic amino acids.
16 eceptor is preferentially tuned to recognize basic amino acids.
17 erse mixture of polar, nonpolar, acidic, and basic amino acids.
18 educed by mutation of additional clusters of basic amino acids.
19 recognition motif consisting of a cluster of basic amino acids.
20 sic residues followed by a tail of scattered basic amino acids.
21 phobic phenylalanine residues and flanked by basic amino acids.
22 ((273)GSIIRKWN(280)) that contains only two basic amino acids.
23 uires a region with an overrepresentation of basic amino acids.
24 Integrin beta TMDs have such conserved basic amino acids.
25 s altering potential M1 RNA-binding regions (basic amino acids 101RKLKR105 and the zinc finger motif
27 ion of CobB(L) is amphipathic, containing 18 basic amino acids (12 of which are Arg) and 13 hydrophob
28 s exceptionally efficient PCNA binding and a basic amino acid 4 residues downstream of the PIP box, w
29 rected mutagenesis, SET binding sites to the basic amino acids (66)KRKK(69) and (246)RK(247), located
30 e-rich region, a region (BR) that is rich in basic amino acids, a longer serine-rich region and a C-t
31 domain revealed that a conserved block of 22 basic amino acids (aa 365-386; exons 5-6) is sufficient
32 to heparin, and each contained a cluster of basic amino acids; among them, an intact R(282)VSR(285)S
33 the fusion cleavage site identified multiple basic amino acids and a phenylalanine at position 117, i
34 e protein are novel, with a small stretch of basic amino acids and a putative leucine zipper motif.
36 ol gradients, showed a high concentration of basic amino acids and inorganic phosphate, and were able
38 I prefers to cleave on the C-terminal end of basic amino acids and produced the highest number of fra
39 alpha-helical hydrophobic domain followed by basic amino acids and proline in the same relative genom
41 ies adjacent to the three-residue cluster of basic amino acids and thus may moderate the combined loc
43 ubstrates occurred on the C-terminal side of basic amino acids, and Km for this reaction was approxim
45 ion signals; one is composed of a stretch of basic amino acids, and the other is a bipartite signal l
46 ess, the C- and N-terminal parts are rich in basic amino acids, and these are interspersed with other
48 anhydride, peptides that contain C-terminal basic amino acids are isolated by affinity chromatograph
52 and by the electrostatic interactions of two basic amino acids, Arg(62) and Lys(64), with the phospho
53 n-binding activity of FNIII1 to a cluster of basic amino acids, Arg613, Trp614, Arg615, and Lys617.
55 5 and H7 subtypes typically possess multiple basic amino acids around the cleavage site (MBS) of thei
56 ntrol peptides containing the same number of basic amino acids as TP but lacking disulfide constraint
57 amino acid repeats with a high percentage of basic amino acids, as well as an amino-terminal extensio
59 nd in vivo by the insertion of an additional basic amino acid at the HA cleavage site and not by the
60 owever, the TX/04 isolate had one additional basic amino acid at the HA cleavage site, which could be
62 hydrophobic and bulky amino acids at P2 and basic amino acids at P3 display better binding activity
63 hogenicity (i.e., their HA contains multiple basic amino acids at the cleavage site and has glycosyla
64 downward arrowFA) (underlining indicates the basic amino acids at the F protein cleavage site, and th
67 olume and a severe growth defect specific to basic amino acid availability for btn1-Delta, but not wi
69 cterization of two Arabidopsis mitochondrial basic amino acid carriers (BAC), AtmBAC1 and AtmBAC2, wh
70 current study, a mutant trypsinogen (paired basic amino acid cleaving enzyme (PACE)-trypsinogen), wh
71 Several PCs, including furin, PC5/6, paired basic amino acid-cleaving enzyme 4, and PC7, are able to
72 folded structure together with three or more basic amino acids closely packed in a charged region in
73 e C-terminal region of NSm, which contains a basic amino acid cluster and a putative transmembrane do
75 ino acids 208 to 236, containing a bipartite basic amino acid cluster, is able to mediate nuclear loc
76 demonstrated that mutating one of the three basic amino acid clusters (R or K --> A) leads to signif
81 oylated cysteines and the presence of nearby basic amino acids determine polarized targeting by these
84 at replacement of a hydrophobic residue by a basic amino acid enabled the meprin alpha protease to cl
86 d MAPK includes residues 128-133 (KGFFRR), a basic amino acid-enriched motif novel for MAPK substrate
87 a heart-shaped homodimer with a ridge of six basic amino acids extending diagonally across the apolar
88 ormation of salt bridges between SRP RNA and basic amino acids facilitates the binding of a distinct
89 and builds upon previous studies implicating basic amino acids flanking the zinc finger as important
90 a structural motif composed of a cluster of basic amino acids followed by Ser or Thr dramatically re
91 s pinpointed the association to a histidine (basic amino acid) for aspartic acid (acidic amino acid)
92 ween negatively charged PM phospholipids and basic amino acids found in K-Ras4B (K-Ras) but not in H-
94 these enzymes in mouse serum can remove the basic amino acids from the C-terminus of CCK5-GRR and LH
97 )Q sequence have a positive influence, while basic amino acids have a negative influence on substrate
98 utamate residues at positions 9 and 13 and a basic amino acid (HKH) motif at positions 15-17 on the a
99 r basis for block, we mutated a portion of a basic amino acid (HKH) motif on the Cx40 amino-terminal
101 phase basicities than the side chains of the basic amino acids (i.e., those of histidine, lysine, or
102 minal amino group and the side chains of the basic amino acids, i.e., the favorable sites for binding
103 glutamic acid, but not to several neutral or basic amino acids, impedes protease autoprocessing in ba
105 irected mutagenesis targeting each conserved basic amino acid in RAG2 revealed several separation-of-
106 the R174W mutation neutralizes the innermost basic amino acid in the voltage-sensing S4 helix of the
107 itionally, statistics on the distribution of basic amino acids in a data set of membrane-binding doma
108 possibility we examined the degree to which basic amino acids in a signal peptide influence the targ
109 trahymena 40 S.eIF1 complex revealed several basic amino acids in eIF1 contacting 18 S rRNA, and we t
113 5, it appears that the C-terminal stretch of basic amino acids in Rac is required for a high affinity
116 lity that electrostatic interactions between basic amino acids in signal peptides and the phosphate b
117 Cumulatively, the results demonstrate that basic amino acids in the autolysis loop of fXIa are impo
119 eric and octameric CK: (a) presence of seven basic amino acids in the C-terminal end thought to be im
121 s dependent on the integrity of a stretch of basic amino acids in the carboxy terminus of Chp and tha
125 rat neuroendocrine cells, we find that a few basic amino acids in the cysteine-rich region of SNAP25
126 front-to-back arrangement, with a cluster of basic amino acids in the front of the MEKK2 PB1 domain b
127 ructure of 12 amino acid residues flanked by basic amino acids in the HIV-1 MSD that function to anch
134 predicted by identifying groupings of nearby basic amino acids in the positive mode or acidic amino a
135 in nature, and is facilitated by a region of basic amino acids in the tail and the acidic E-hook at t
136 apoE to its receptor binding domain and the basic amino acids in this domain are important for its a
139 N-terminal 15 amino acids, particularly six basic amino acids, in the C-terminal PA-X-specific regio
140 yzed peptide bonds on the C-terminal side of basic amino acids, including a bond located within the C
141 resented results further our knowledge about basic amino-acid insertion into bilayers, and may lead t
142 physiological role of SLC25A29 is to import basic amino acids into mitochondria for mitochondrial pr
143 sport of, or regulation of the transport of, basic amino acids into the vacuole or lysosome for yeast
144 ly, our results suggest that cleavage at all basic amino acids is suppressed when a mobile proton is
145 utant Gap1p(A297V), which does not transport basic amino acids, is also not regulated by these amino
149 of gentamicin and the clinically compatible basic amino acid L-arginine against planktonic and biofi
150 of gentamicin and the clinically compatible basic amino acid L-arginine increases in vitro planktoni
151 We determined that the incorporation of basic amino acids led to analogues with improved inhibit
152 rges, particularly those with three or fewer basic amino acids, led to a significant decrease in pote
155 cation designed to predict cleavage sites at basic amino acid locations in neuropeptide precursor seq
157 e sequences that contain a single cluster of basic amino acids (Lys/Arg) or bipartite sequences that
159 ncentrations of Zn2+, high concentrations of basic amino acids (lysine and arginine), and heparin.
160 was coincident with an arginine (or another basic amino acid, lysine) at a position corresponding to
161 ct primary preference for cleavage after the basic amino acids, lysine and arginine, with only a slig
163 Ins(3)P and that this interaction requires a basic amino acid motif (KKPAKK) within the cytosolic reg
164 minus (NLS-c), which consists of a bipartite basic amino acid motif plus the last 39 residues of ADAR
165 nes of these H5N1 viruses possessed multiple basic amino acid motifs at the cleavage site, were HP fo
167 ediated by one or more specific stretches of basic amino acids-nuclear/nucleolar localization signals
169 signaling, suggesting a role for N-terminal basic amino acids of alpha(q) beyond simple plasma membr
170 ular modelling suggests that interactions of basic amino acids of the enzyme with the carboxyls on th
172 contacts that primarily involve clusters of basic amino acids on actin subdomains 1 and 3 juxtaposed
175 n binders as they do not contain clusters of basic amino acids or other known features associated wit
176 was mutated to contain increased numbers of basic amino acids or to mimic the naturally occurring cl
178 overexpression of Can1p, the plasma membrane basic amino acid permease, results in increased cell vol
179 d residues within the amphipathic helix (the basic amino acid PI(4,5)P2 pincer domain) was required f
182 of the hydrophobic patch or the surrounding basic amino acids prevents PM localization of GRK5-GFP.
183 nd in combination with previously identified basic amino acid probes can be used to examine molecular
184 nkephalin sequence flanked by sets of paired basic amino acid proteolytic cleavage sites and two C-te
185 Using large-scale mutagenesis, acidic and basic amino acids putatively involved in ion transport m
187 al series of amino acids bounded by pairs of basic amino acids, raising the possibility that addition
191 ly protonated glycopeptide ions containing a basic amino acid residue almost exclusively resulted in
193 of its homologs in other bacteria, there are basic amino acid residues (Arg, Lys, and Gln) immediatel
195 ally pronounced with peptide ions containing basic amino acid residues (for example, tryptic peptides
196 ling and mutagenesis identified a cluster of basic amino acid residues (Lys(51), Arg(56), and Arg(80)
197 itively charged clusters, involving up to 11 basic amino acid residues (mostly arginines with their p
198 ion near the C-terminal domain enriched with basic amino acid residues also affected the nuclear impo
199 nism involves protein electrostatics between basic amino acid residues and acidic lipids such as phos
200 sphatase domain and an N-terminal cluster of basic amino acid residues conforming to a nuclear locali
201 peptides HA and BMP2, which contained highly basic amino acid residues either at the N-terminus (BMP2
202 sheet of kallistatin containing clusters of basic amino acid residues has been identified as a hepar
203 bridge the ribose zipper chain segments with basic amino acid residues hydrogen bonding to the RNA ba
204 hibition of TRPML1 were mediated by distinct basic amino acid residues in a common PIP(2)-interacting
205 R1 from PLDbeta or mutation of the conserved basic amino acid residues in PBR1 (K437G/K440G) abolishe
206 all, our results support the notion that the basic amino acid residues in the C-terminal domain provi
207 n studies indicate that two highly conserved basic amino acid residues in the C-terminal region, Lys3
208 Conserved in the ErbB family is a cluster of basic amino acid residues in the cytoplasmic juxtamembra
209 de levels in mice and that a substitution of basic amino acid residues in the region 61-66 of the fra
211 occur by interaction of sulfate groups with basic amino acid residues on the surface of the enzyme,
213 amino acid sequence containing two groups of basic amino acid residues separated by eight amino acid
214 r the derivatization step removes C-terminal basic amino acid residues such as arginine and lysine.
218 rboxyl-terminal domain, whereas a cluster of basic amino acid residues within the N-terminal domain i
221 s, with most of these sites being flanked by basic amino acid residues, and predicted to be solvent e
222 most aspartic proteases from other origins, basic amino acid residues, particularly lysine, were fou
223 oposed to be a consequence of the absence of basic amino acid residues, promoting a mobile proton-lik
224 Mutational analyses showed that a cluster of basic amino acid residues, which is conserved among many
225 peptides centers on alternating aromatic and basic amino acid residues, with dimethyltyrosine providi
226 charged peptides, including those harboring basic amino acid residues--a crucial feature in the cont
232 previously, a cleavage position between two basic amino-acid residues, was extended to a three amino
236 the extent to which a cis-acting CD3epsilon basic amino acid-rich stretch (BRS), with its unique pho
238 no acid positions 148 to 162 and a series of basic amino acids (RKLKR) at amino acid positions 101 to
239 no acid positions 148 to 162 and a series of basic amino acids (RKLKR) at amino acid positions 101 to
240 arbors a putative NLS with three clusters of basic amino acids (RRRHIVRKRTLRR (amino acids 645-657))
241 the TGF-beta propeptide-binding domain and a basic amino acid sequence (hinge domain) with ECM target
242 nts with [(14)C]-labeled neutral, acidic and basic amino acids showed significantly reduced uptake of
243 ally unstructured portion of Scr so that two basic amino acid side chains can insert into the minor g
244 e stations for the positioning of acidic and basic amino acid side chains for use in proton shuttling
246 the precursor ion as well as the presence of basic amino acid side chains, phosphate transfer reactio
248 rchetype of the entire family, OccD1, from a basic amino acid-specific channel into a channel with a
250 at positions 101 to 105, M1 contains another basic amino acid stretch at positions 76-78 that is high
255 The OFQ peptide sequence contains paired basic amino acids, suggesting the possibility of posttra
256 acids on the opposite face, and a number of basic amino acids surrounding the hydrophobic patch.
257 tution mutagenesis demonstrated that R327, a basic amino acid that is highly conserved in CfrA, plays
259 ational data, highlight five acidic and four basic amino acids that are likely to comprise the LEF4 t
260 f the carboxyl terminus containing clustered basic amino acids that bear resemblance to proposed hepa
261 on factors (bZIPs) contain a segment rich in basic amino acids that can bind DNA, followed by a leuci
262 PTDs usually consist of short stretches of basic amino acids that can cross the plasma membrane and
264 to heparin binding formed a cluster of five basic amino acids that presented toward the icosahedral
265 he structure revealed a cluster of conserved basic amino acids that protrude from the surface of Hha
267 ontrast to the classic NLSs that are rich in basic amino acids, the novel NLS identified in this stud
268 her organisms can synthesize polyamines from basic amino acids, the protozoan parasite Trypanosoma cr
270 natomy of RAG-1, we mutated all 86 conserved basic amino acids to alanine and evaluated the mutant pr
271 transporter system function in the uptake of basic amino acids to support growth of M. catarrhalis.
272 group acts in conjunction with a cluster of basic amino acids to target Nullo to the plasma membrane
275 ransmembrane protein involved in neutral and basic amino acid transport and in cell fusion events.
277 ation of L-arginine occurs via the saturable basic amino acid transporter that has specificity for am
278 g glucose transporter 2 (Glut2), neutral and basic amino acid transporter, liver pyruvate kinase (L-P
280 he N terminus of the proteinase containing a basic amino acid triplet (Arg8-Lys9-Lys10) that forms mu
281 terestingly, in the most central position, a basic amino acid triplet of p135H peptide was found to b
284 ergy (BE) of protonated amines, pK values of basic amino acids were calculated by plotting the fracti
285 in the carboxy terminus of Chp and that the basic amino acids were not simply part of a palmitoyl ac
286 is is a new chemical synthesis of one of the basic amino acids which had not been synthesized prebiot
287 P1 N terminus contains a number of groups of basic amino acids which resemble classical nuclear local
288 sites on TG2 mainly comprise two clusters of basic amino acids, which are distant in the linear seque
289 quence near the N terminus comprised of four basic amino acids, which in a peptide can act to transpo
292 E12 and E47 each contain two regions of basic amino acids, which, when mutated, lead to cytoplas
293 the PB1-F2 reveals that replacement of five basic amino acids with Ala abolishes mitochondrial targe
297 his purpose, we substituted alanines for two basic amino acids within NS1 (R38 and K41) that were pre
300 d a 13-residue sequence of basic-hydrophobic-basic amino acids within the putative PH domain that may
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