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1 and genetic evidence support an overlapping binding site of 1 with the anti-cancer compound didemnin
2 and applied both to predict the genome-wide binding sites of 1312 TFs available from protein interac
4 he D-helix of CD81, which coincides with the binding site of 1D6, a monoclonal anti-CD81 antibody kno
6 and DNA shape features surrounding the core-binding sites of 239 and 56 TFs extracted from in vitro
9 the pT1471 phosphate occupies the phosphate-binding site of a canonical pY complex, while Y1473 occu
10 tem, GABA was placed quasi-randomly near the binding site of a GABAA-R homology model, and atomistic
11 s, Ncd and KIFC3, to determine the potential binding site of a known KIFC1 ATPase inhibitor, AZ82.
12 T cells is a means of combining the antigen-binding site of a monoclonal antibody with the activatin
13 dues W(437)LAGLF(442), which encompasses the binding site of a neutralizing monoclonal antibody, mAb4
16 entially able to interact at two orthosteric binding sites of a heterodimer simultaneously, possibly
17 ectroscopy (SRCS) process to determine which binding sites of a molecule preferentially bind to a pla
19 sly and cooperatively bind the CD4- and CCR5-binding sites of a single gp120 monomer of the HIV-1 env
20 y that binds adjacent to the heparan sulfate binding site of A27, likely affecting ligand binding.
24 umanizing mutations in the vestibule-located binding site of AChBP to improve its suitability as a mo
25 its two-fold symmetry in the vicinity of the binding site of adamantyl inhibitors, and steric constra
31 bly, there is no overlap between the primary binding site of alphaXbeta2 and the binding site of alph
32 he N terminus of chECL1, suggesting that the binding site of ALV-J gp85 on chNHE1 is probably located
33 immunoprecipitation (iCLIP) to identify the binding sites of ALYREF, an mRNA export adaptor in TREX,
34 cytosolic leaflet enter the empty G-protein binding site of an activated beta2 adrenergic receptor a
35 tained in the lipidic cubic phase reveal the binding site of an endogenous porphyrin ligand and confo
36 gical catalysis within the natural substrate binding site of an enzyme that can be subjected to direc
37 tors, to identify a component of the odorant-binding site of an OR from the malaria vector, Anopheles
40 main linker of one molecule in the substrate binding site of another, attenuating the chaperone funct
42 nalysis, we identified several P. gingivalis-binding sites of ArcA, which led to the discovery of an
44 rmethylated enhancer regions overlapped with binding sites of B cell-specific transcription factors (
45 odimer was formed involving the nucleic acid binding site of BolA and the C-terminal tail of Grx.
49 her than APC/C(Cdh1), and interacts with the binding sites of both the C-box and Ile-Arg tail motifs.
51 molecular modeling study demonstrated that A binding sites of BSA play the main role in the interacti
55 id monolayers are used to characterize local binding sites of calcium in zwitterionic and anionic mod
56 rst molecular insights into the phospholipid binding site of calreticulin as a key anchor point for t
57 h affinity ligands on GC B-cells unmasks the binding site of CD22 relative to naive and memory B-cell
58 that favor competitive inhibition at the ATP binding site of CDK2 were identified and typically exhib
59 em is governed by two binding sites: The key binding site of CFTR (pS768) occupies one groove of the
61 nity labeling (PAL) was used to identify the binding site of chroman-4-one-based SIRT2-selective inhi
63 wild-type 46-residue peptides containing ATP-binding sites of Class I and II synthetases and those co
64 ate-dependent reduction of the dicarboxylate-binding site of complex II (site IIf); (b) pore opening
68 the type of complexes formed may affect the binding sites of Cu(2+) available to catalyse the format
69 two reducing-end mannoses into the domain A binding site of CV-N than with the nonreducing end unit.
71 previously been shown to contain the ICAM-1 binding site of DBLbeta domains, suggesting that the mAb
74 y or by competition interactions, either for binding sites of dissolved organic carbon or for biotic
75 nd supposed to interact with the orthosteric binding site of dopamine receptors, was actually a negat
80 reference compound (Erlotinib) into the ATP binding site of EGFR-TK domain (PDB ID:1M17) to elucidat
86 centers on a dynamic hub near the nucleotide-binding site of Galphas, and radiates to helix alpha4.
90 ype-associated SNPs were present in microRNA-binding sites of genes involved in energy metabolism and
92 utralization spectrum, interact with the CD4 binding site of gp120, with a contact dominated by CDRH3
93 to other Hsp90 isoforms, the N-terminal ATP-binding site of Grp94 possesses a unique hydrophobic poc
94 Three nitrated tyrosines reside in the heme-binding site of hemopexin, and we found that one, Tyr-19
95 Ps are significantly over-represented in the binding sites of HNF4 and FOXA families of liver transcr
97 erent positions within the central substrate-binding site of hSERT, while no crosslinking is observed
99 ation in the peptide YYCFQGNQFLR in the heme-binding site of human hemopexin, which was similarly nit
101 a cysteine-to-serine mutation in BTK at the binding site of ibrutinib in five patients and identifie
104 F) at selected positions in hSERT to map the binding site of imipramine, a prototypical tricyclic ant
105 revealed NLS2 primarily binds the major-NLS binding site of importin alpha, unlike NLS1 that associa
107 sitive hits exclusively when a ligand at the binding site of interest is displaced; it mitigates fals
108 bias in ChIP-seq is challenging because the binding sites of interest tend to be more common in high
110 In contrast, staurosporine binds at the ATP-binding site of IRE1alpha, resulting in a dimer consiste
111 to a monoglycopeptide shows that the GalNAc-binding site of its lectin domain is rotated relative to
112 portant for the stabilization (first calcium binding site) of its zymogenic form and the possible mod
114 ealed specific RNA cleavages, localizing the binding sites of L7Ae to the RPR's catalytic and specifi
116 restingly, all proteins bound at the heparin-binding sites of laminin, including the globular domains
117 m mice harboring a mutation at the PLCgamma1 binding site of LAT (Y136F) have impaired calcium flux a
119 of mutations in both actin- and tropomyosin-binding sites of leiomodin affected its localization at
120 ynamic complex, we first mapped the adjacent binding sites of light chains MLC1 and ELC1 on the MyoA
121 ion NMR experiments, we were able to map the binding site of LOC14 as being adjacent to the active si
123 technology such as ChIP-seq, the genome-wide binding sites of many proteins have been profiled under
124 not in those of Fmr1 KO neurons or when the binding site of miR125a, previously shown to bind PSD-95
125 roach, MBSTAR (Multiple instance learning of Binding Sites of miRNA TARgets), for accurate prediction
126 and (S)-17b, which bind within the substrate-binding site of MMP-13 and surround the catalytically ac
127 site shows structural similarity to the GTP-binding site of MoaA, suggesting that the viperin substr
128 bout the underlying molecular mechanisms and binding sites of modulatory compounds, we know just the
129 ug-like compounds able to target the antigen-binding sites of most or all patients in a stereotyped s
130 nt with its repressive function, the genomic binding sites of Myt1l are similar in neurons and fibrob
131 substitutions that are found in the 2nd SIA-binding site of NA proteins of avian-derived IAVs that b
132 , with striking parallels to the glutathione binding site of NaAtm1, a transporter that functions in
134 inding modes are made possible by the C-lobe-binding site of NCS-1, which adopts alternative conforma
137 zed the specific amino acids involved in the binding site of nNOS-PDZ with dystrophin R16-17 using co
139 both VEGFR2 and NRP1, including the VEGF164-binding site of NRP1 and the NRP1 cytoplasmic domain (NC
140 say showed that PL directly binds to the DNA binding site of nuclear factor-kappaB (NF-kappaB) p50 su
141 th regulatory (i.e., allosteric) Mg(2+)-dNTP-binding sites of nucleos(t)ide-metabolizing enzymes susc
142 ed CpGs downstream from SALL4 TSS are within binding sites of octamer-binding transcription factor 4
143 f neuronal genes, partially co-localizing at binding sites of OLIG2, a key activator of motor neuron
144 resent structural data that reveal the viral binding site of one of the first HIV-1-neutralizing anti
148 ination with previous studies evaluating the binding sites of other protective antibodies, our result
149 ct binding modes to the choline/ethanolamine-binding site of P. falciparum choline kinase, reflecting
150 The WW domain of Rsp5 binds to the viral RNA-binding sites of p33 and p92 replication proteins and bl
151 The compounds bind competitively to the ATP binding site of p38alpha but unexpectedly with higher af
155 ar docking studies suggested that the ligand binding site of PEDF-R interacts with the neurotrophic r
158 Here we present the mutations in the ATP-binding site of PI3Kalpha to progressively transform the
159 ydrophobic binding cleft adjacent to the ATP binding site of PI3Kgamma, and achieves its selectivity
161 s, alpha2AP can no longer bind to the lysine binding sites of plasmin(ogen) and is only a kinetically
163 at the information freely transfers from the binding site of preQ1 to the expression platform of the
165 Furthermore, the structure revealed (i) the binding site of proMPO-processing proconvertase, (ii) th
166 that stolonidiol binds to the phorbol ester binding site of protein kinase C (PKC), induces transloc
167 ional suppressor mutations in the acetyl-CoA binding site of pyruvate carboxylase (PycA) rescued cefu
168 lection of a nucleotide change at the miR172 binding site of Q contributed to subcompact spikes and f
170 rmation of RapA, define the binding mode and binding site of RapA on RNAP, and show that the binding
171 ding site of RapA on RNAP, and show that the binding sites of RapA and sigma(70) on the surface of RN
172 tructural binding preferences and predicting binding sites of RBPs, which takes (predicted) RNA terti
174 ore stable interactions at the secondary RNA binding sites of Rho, which reduced the lag in initiatin
176 r EDC/GEE, are used together to pinpoint the binding sites of rifamycin SV, doxycycline, and another
177 ions between m5C and micro RNA target sites, binding sites of RNA binding proteins, and N6-methyladen
179 l structural changes that open the substrate binding site of Rv2466c allowing the release of the acti
180 dence that SA acts at or near the ubiquinone binding site of SDH to stimulate activity and contribute
183 faces the outside of the protein and is the binding site of several animal toxins, and the palm, a c
185 ific hypomethylated regions are enriched for binding sites of similar transcription factors, suggesti
186 steric binding site of NMS overlaps with the binding site of some allosteric, ectopic and bitopic lig
187 tent cyclic peptidomimetic bound to the iNOS binding site of SPSB2 with low nanomolar affinity (KD 29
191 an SULT allosteric binding site-the catechin-binding site of SULT1A1 bound to epigallocatechin gallat
192 tructure of an NSAID allosteric site-the MEF-binding site of SULT1A1-is determined using spin-label t
195 In contrast to T1 sigma1, the carbohydrate-binding site of T3 sigma1 is located in the tail domain,
197 expression and genetic variation in microRNA-binding sites of target genes on growth and muscle quali
198 region homologous to the muscarinic receptor-binding site of Tau suggests that MAP2c also may regulat
202 by the binding of alternative factors to the binding sites of TFs whose activity has been ablated.
204 and HS is strong, the conformational heparin binding site of TG2 is not conserved, suggesting that TG
206 ibiting protein biosynthesis by blocking the binding site of the A-tRNA elbow, a mechanism not shared
208 2A (SV2A) isoform has been identified as the binding site of the antiepileptic levetiracetam (LEV), m
209 cificity, CD-160130 did not bind to the main binding site of the arrhythmogenic KV11.1 blockers (the
210 raphic fragment screening to map the protein-binding site of the aspartic protease endothiapepsin by
211 that oxygen penetrates spontaneously the Qo binding site of the bc1 complex in the presence of an in
212 r KCa3.1 over KCa2.3, we first localized the binding site of the benzothiazoles/oxazoles to the CaM-B
213 ophore that is positioned in vicinity of the binding site of the binding protein using unnatural amin
214 an inactive conformation in which the UbcH10-binding site of the catalytic module is inaccessible.
215 nd therefore is sensitive to changes in both binding site of the cation and chromophore orientation.
216 es had a high binding affinity for the oxLDL binding site of the CD36 receptor and participated in CD
218 f the 3-benzazepin-1-ols into the ifenprodil binding site of the crystallized GluN1b/GluN2B N-termina
219 To test this hypothesis, we blocked the CD4 binding site of the envelope antigen and compared it to
221 A triple mutation in the phosphopeptide-binding site of the forkhead-associated (FHA) domain dis
224 es, which recognize the conserved coreceptor-binding site of the HIV-1 envelope glycoprotein (Env), c
226 169R mutation located at the second receptor binding site of the HN protein contributed to a complex
227 nd the ligand binding site is similar to the binding site of the homologous receptors for the calcito
233 interact either with the phencyclidine (PCP) binding site of the N-methyl-d-aspartate (NMDA) receptor
235 no terminus and with the substrate/inhibitor-binding site of the opposite protomer at its carboxyl te
236 a structural model that places the receptor-binding site of the PDZ domain and membrane-binding surf
237 addition to a PIP3 molecule at the canonical binding site of the PH domain, we observe additional PIP
238 ereas the composition of the aromatic H3K4me-binding site of the PHD fingers appears to have no effec
239 n at the VWF A1 domain, corresponding to the binding site of the platelet glycoprotein Ibalpha (GPIba
241 presence of ice-like water layers at the ice-binding site of the protein in aqueous solution at tempe
242 atic potential in the secondary quinone (QB) binding site of the reaction center (RC) of the photosyn
243 an avian-like glycine at the HA 228 receptor binding site of the reassortant H3N2 virus with 5 A(H1N1
244 he two most common are binding to the ligand-binding site of the receptor and, conversely, binding to
245 by ligands interacting with the orthosteric binding site of the receptor to incorporate concepts of
246 nd kinase domains and to the phosphotyrosine-binding site of the SH2 domain, respectively, inhibits t
249 (a) and an antibody targeting ligand-induced binding sites of the activated GPIIb/IIIa receptor (MBDu
250 omosome, constrained by interactions between binding sites of the chromosomal condensin complex, a ke
253 iation in mice, we characterised genome-wide binding sites of the forkhead/winged helix transcription
254 cers active in liver cells, enriched for the binding sites of the FOXA1, FOXA2 and HNF4A transcriptio
255 graft survival, estimated AA MMs at peptide-binding sites of the HLA-DRB1 molecule account for an im
256 teins in pressurised meat affected the water binding sites of the myofibrillar proteins and, thereby,
260 nine nucleotides to the canonical nucleotide binding sites of the regulatory Bateman domain induces d
261 llicKZ, this protein associates with two RNA binding sites of the RNase E component of the Pseudomona
262 CRS regions (1) colocalize consistently with binding sites of the same RNA binding proteins (RBPs) or
264 H3K27ac after nerve injury are enriched for binding sites of the Sox10 and early growth response 2 (
265 lications of this finding on identifying the binding sites of the substrate and the subsequent mechan
266 ns of the FGF12-FGFR1c2 and FGF22-FGFR1c2 HS binding sites of the symmetric FGF2-FGFR2-HS2 signal tra
269 ions of active promoters, CpG island shores, binding sites of the transcription factor CTCF and brain
273 ynaptic membrane surface whenever the ligand-binding sites of their synaptic receptors are buried in
274 r dynamics simulation studies elucidated the binding site of these aniline-based influenza fusion inh
276 ophysical analyses revealed that two antigen-binding sites of these antibodies form a head-to-head di
278 l analyses using agonists to map the odorant-binding sites of these receptors have been limited becau
282 res of prototypical members bound to the ATP-binding site of TNNI3K reveal two anchoring hydrogen bon
283 clude is Avo3, occludes the FKBP12-rapamycin-binding site of Tor2's FRB domain rendering TORC2 rapamy
284 ification marks, chromatin accessibility and binding sites of transcription factors and co-activators
285 functional subsets in vivo were enriched for binding sites of transcription factors known to regulate
286 n is non-random, being strongly enriched for binding sites of transcription factors specifying chroma
287 , immune function, stem cell maintenance and binding sites of transcription factors that drive cellul
288 strate for the ATPase and that the substrate-binding site of TRIP13 is composed of subsites specific
289 small molecule ligands within the thyroxine binding site of TTR can stabilize the tetrameric integri
290 h revealing the ability of the two thyroxine binding sites of TTR to discriminate between different l
291 n be properly accommodated in the colchicine binding site of tubulin as well as in the ATP binding cl
292 toichiometry of K2hPg/VKK38, with the lysine-binding sites of two K2hPg domains anchored to two regio
293 sing synthetic Phl p 1-derived peptides, the binding sites of two ScFvs were mapped to the N terminus
294 nts by phage display that bind the back side binding site of Ubc9 and function as SUMO-based Ubc9 inh
297 The identification of similarities between binding sites of various proteins is a useful approach t
299 ds to the identification of a potential drug-binding site of ZIKV NS5, which might facilitate the dev
300 stidine-rich motifs, which are the predicted binding site of Zn(2+) in the Zn-deficiency response.
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