ライフサイエンスコーパス: bp.

1 tions (an average of one insertion every 6.0 bp).

2 e form of relatively small fragments (<1,000 bp), making its isolation challenging.

3 d and analyzed intermediate length (10-1,000 bp) insertions in plants.

4 nd soft-clipped tails of long reads (>10,000 bp) to identify structural variants.

5 The delivery of large DNA vectors (>100 000 bp) remains a limiting step in the engineering of mammal

6 with both short (<600 bp) and long (>35 000 bp) insert sizes producing high-quality scaffolds.

7 s containing viruses with genomes of <40,000 bp, and 4 of 6 specimens positive for large-genome virus

8 , 15,027 bp) and Florida (mt-FLpsy, 15,012 bp), USA, were acquired.

9 sequences from California (mt-CApsy, 15,027 bp) and Florida (mt-FLpsy, 15,012 bp), USA, were acquir

10 s) had genome lengths of 178,262 bp, 171,045 bp, and 171,454 bp, respectively, and were phylogenetica

11 rdB copies were in long form (nrdB(L), 1,059 bp) and two were in short form (nrdB(S), 378 bp).

12 egulatory region of the SLC25A19 gene (1,080 bp).

13 es of the landscape at a smaller scale (5-10 bp) could be recovered in favorable regions at the begin

14 iation for both short (<10 bp) and long (>10 bp) DNA duplexes.

15 t describes dissociation for both short (<10 bp) and long (>10 bp) DNA duplexes.

16 fragment containing the five motifs (the 10-bp, 10-bp-like, 10-bp-related, Region 2 and Fifth motifs

17 islands are quite short ( approximately 100 bp), are enriched near active genes, and often occur at

18 re observed with small DNAs and RNAs (10-100 bp): high voltages and short run times produced sharper

19 rage depth using longer reads (e.g., >/= 100 bp).

20 A becomes fragmented and damaged (often <100 bp) and may persist in the environment for more than hal

21 Short indicator RNA sequences (<100 bp) persist after autoclaving and are recovered intact b

22 eed to be either long reads (longer than 100 bp) or joined paired-end reads.

23 iscovery, in particular for indels of 30-100 bp, the 'NGS twilight zone of indels', in the Genome of

24 mplify fragments (horse; 85 bp, soybean; 100 bp, sheep; 119 bp, poultry; 183 bp, pork; 212 bp and cow

25 However, for DNA fragments shorter than 100 bp, all sets of parameters performed poorly yielding res

26 SVs, especially in the range from 30 to 100 bp, which we call the next-generation sequencing (NGS) t

27 ied out with short (36-50 bps), long (75-100 bps), single-end, or paired-end reads, the impact of the

28 nt distances ( approximately 20, 50, and 100 bps), we analyzed the repair outcomes by deep sequencing

29 nd STAT1 sites located between -777 and -105 bp (region A) and -921 and -796 bp (region B), respectiv

30 to assays with larger amplicon sizes (>/=105 bp) (P < .001).

31 east 8 bp or a DNA-RNA duplex of at least 11 bp; RNA-RNA duplexes were more effective than DNA-RNA.

32 s (horse; 85 bp, soybean; 100 bp, sheep; 119 bp, poultry; 183 bp, pork; 212 bp and cow; 271 bp) of th

33 ngth, and 10 dsRNA segments ranged from 1192 bp (S4) to 3958 bp (L1), encoding 12 viral proteins.

34 rmed Site 4 (bp -7997 to -7988) and Site 12 (bp -7835 to -7826).

35 o different DNA regions in beef (106 and 120-bp) and buffalo (90 and 138-bp) mitochondrial genes to d

36 tal monitoring) and long amplicons (800-1200 bps, designed to cover the entire resistance genes).

37 The two amplicons generated span 7,124 bp, providing substantial sequence length and numbers of

38 varies orders of magnitude in size from 125 bp (budding yeast) to several megabases (human).

39 dem sites (two binding sites separated by 13 bp).

40 8 bp) and one large single copy (LSC; 89,132 bp).

41 CENP-A protects DNA lengths centered on 133 bp, consistent with octameric nucleosomes with DNA unwra

42 SCAR primers gave amplicon of 415 bp and 134 bp, respectively, in authentic species.

43 eef (106 and 120-bp) and buffalo (90 and 138-bp) mitochondrial genes to discriminate beef and buffalo

44 bp) and subnucleosome-sized (such as 101-140 bp) peaks of digested chromatin fragments with MPE-seq b

45 pulations we have sequenced a portion (8,141 bp) of the mitochondrial (mt) genome in 28 specimens of

46 dobrensis and L. bryoniae, which were 16,141 bp, 16,236 bp and 16,183 bp in length, respectively.

47 size, and thus the CyHV3 genome, at 295,146 bp, remains the largest recorded among the herpesviruses

48 lysis of the assembled draft genome (1462509 bp) revealed the presence of 29 putative reductive dehal

49 engths (of 4-5 bp) and stem lengths (of 7-15 bp).

50 tively large minimum sequence lengths (>/=15 bp) compared with the average length of known transcript

51 nome sequencing using short-read (e.g., <150 bp), next-generation sequencing technologies has reinvig

52 or R-loop elongation, whereas a longer (150 bp) insertion impairs both.

53 When homology at the matched end is </=150 bp, efficient repair depends on the recombination enhanc

54 When homology at the second end is </=150 bp, second-end capture becomes inefficient and repair sh

55 Here we used short (150-bp) and long (multi-kb) synthetic reads to evaluate stra

56 osomal DNA sizes varying between 147 and 155 bp, with positions of the MNase cuts reflecting position

57 suggests an effective nucleosome size of 158 bp, instead of the commonly perceived 147 bp.

58 imately ten petabases of DNA sequence (10 16 bp).

59 atosome, containing H1 and approximately 160 bp, and then converts it to a core particle, containing

60 ) within the TNFA promoter (at -163 and -161 bp) displayed increased methylation in CP samples compar

61 intermediate particles containing 154 or 161 bp, corresponding to 7 bp protruding from one or both si

62 onths (16 of 21 patients; mean increase, 175 bp [95% CI, 79 to 271]) and 12 months (16 of 18 patients

63 ence of croaker elovl4, which contained 1794 bp (excluding the polyA tail), including 909 bp of codin

64 ted p53 REs contain spacers between 1 and 18 bp; however, their functional significance is unclear at

65 soybean; 100 bp, sheep; 119 bp, poultry; 183 bp, pork; 212 bp and cow; 271 bp) of the mitochondrial c

66 bp (nucleosome repeat length (NRL) = 160-184 bp).

67 r various PCR products consisting of 180-190 bp (dsDNA) were recorded by Osteryoung square-wave volta

68 requently observed nucleosome-sized (141-190 bp) and subnucleosome-sized (such as 101-140 bp) peaks o

69 the mammal-specific Area II (-2139 to -1958 bp) affects minor or major aspects of organogenesis.

70 and PRS2 hotspots encompassing 1026 and 1976 bp, respectively.

71 ir has a unique 93 base pair (bp)-long (+/-2 bp) ArgR-binding sequence containing two ARG boxes (39 b

72 We examined the activity of a 2-bp, rNMP-dependent deletion hotspot [the (TG)2 hotspot]

73 ndicate a mutation rate of 2.94 indels (1-20 bp) and 0.16 SVs (>20 bp) per generation.

74 e of 2.94 indels (1-20 bp) and 0.16 SVs (>20 bp) per generation.

75 e show that fragmented DNA molecules (>/= 20 bp) that additionally may contain abasic sites, cross-li

76 npaired guanosines flanking short (12- to 20-bp) dsDNA (Y-form DNA) were highly stimulatory and speci

77 tory mechanisms presented include long (>200 bp) noncoding RNAs that function as an additional regula

78 , and designed short (~60 bp) and long (~200 bp) amplicons for each of them.

79 or relatively short amplicons (less than 200 bp).

80 ntain insertions from nearby DNA (within 200 bp) and can contain multiple donor sources--some distant

81 When read length increases above 200 bp, smaller gains in mappability are expected.

82 binding sites, while separated by nearly 200 bp, appear to communicate in order to provide full YqjI-

83 ith both short amplicons ( approximately 200 bps, representative of ARG amplicon lengths commonly use

84 metagenomes of varied read length (100-2000 bp) revealed that it correctly classified at least 5% mo

85 ites in long introns (especially those >2000 bp) have significantly lower pi (nucleotide diversity) a

86 MuGENT require large arms of homology (>2000 bp) surrounding each genome edit, which necessitates lab

87 e mitogenomes were 15,188, 15,235 and 15,207 bp, respectively.

88 mutation in CAPN3 could be identified; a 21-bp, in-frame deletion (c.643_663del21).

89 of short scaffolds (N50 = approximately 2200 bp).

90 rom Illumina reads alone impossible (N50=222 bp).

91 open reading frames of 2289, 2268, and 2277 bp, were isolated.

92 (+76 bp) and decreased in the controls (-23 bp) (p=0.050).

93 Species-specific SNP position (230 bp) in the matK region that is characteristic of D. hami

94 ic amplification of yfiR (375 bp), hlyA (234 bp) and eaeA (151bp), being one of the primers for each

95 son to that for a distal ( approximately 250 bp) location of the same sequence.

96 uencing data, EBNA3C sites coincided (+/-250 bp) with RUNX3 (64%), BATF (55%), ATF2 (51%), IRF4 (41%)

97 paired-end tags is increased (up to 2 x 250 bp).

98 largest bacteriophage genes to date (14,256 bp).

99 ruses (YSLPVs) had genome lengths of 178,262 bp, 171,045 bp, and 171,454 bp, respectively, and were p

100 , poultry; 183 bp, pork; 212 bp and cow; 271 bp) of the mitochondrial cyt b, lectin, 12S rRNA, 12S rR

101 The adenoviral constructs contained -2871 bp, -750 bp or -232 bp of the ovine FSHB promoter.

102 The PCR products (294 bp) was subsequently digested with HinfI (New England Bi

103 g (NHEJ) with deletions and/or small (1 to 3 bp) insertions.

104 the nuclease domains are too far apart (>30 bp) to dimerise and produce a double-strand DNA break us

105 trated Scalpel's power to detect long (>/=30 bp) transmitted events and enrichment for de novo likely

106 those of the GATK for indels shorter than 30 bp, achieving up to 90% precision overall, with >80% of

107 With read lengths of currently up to 2 x 300 bp, high throughput and low sequencing costs Illumina's

108 V1 and CyHV2 genomes are 291,144 and 290,304 bp, respectively, in size, and thus the CyHV3 genome, at

109 ove our highest-confidence resolution (6,305 bp) and an additional 111 SVs per genome below this reso

110 ntifies binding specificity over a large (31-bp) binding site by iteratively fitting a feature-based

111 equires a DNA-binding site separation of 310 bp, much longer than the length needed for natural loops

112 arcode primer pairs targeting short (127-314 bp) fragments of the cytochrome c oxidase I (CO1) DNA ba

113 ime-stamped second hypervariable region (330 bp) of G-gene sequence data (global, n = 483; and Ontari

114 e length in CD8(+) T cells (2225 versus 3397 bp; P<0.001).

115 tric GUS assays showed that the shorter (345 bp) and medium (827 bp) fragments of nsLTP promoter func

116 mitochondrial genome is comprised of 16,345 bp, and contains the expected 37 genes and control regio

117 cline in telomere length over the year of 35 bp (P<0.05).

118 2G results in two DNA fragments (418 and 350 bp) and of 23S rDNA A2143G results in three DNA fragment

119 different insertion sizes (approximately 350 bp, 600 bp, 3 kb, and 10 kb) of a Tennessee-accessed, gl

120 cing technologies produced reads of 25 or 36 bp, and only from a single-end of the library sequence.

121 onths (16 of 18 patients; mean increase, 360 bp [95% CI, 209 to 512]).

122 variable regions 1 and 2 ( approximately 360 bp) with a de-noising pipeline that significantly improv

123 some fibers with short DNA linkers L = 13-37 bp (nucleosome repeat length (NRL) = 160-184 bp).

124 romoter or mutating AP-1 binding site at -37 bp (A>G) and -38 bp (C>T) reduces the TBP promoter activ

125 for the specific amplification of yfiR (375 bp), hlyA (234 bp) and eaeA (151bp), being one of the pr

126 bp) and two were in short form (nrdB(S), 378 bp).

127 ng AP-1 binding site at -37 bp (A>G) and -38 bp (C>T) reduces the TBP promoter activity.

128 s compared with baseline (mean increase, 386 bp [95% CI, 178 to 593]); in exploratory analyses, simil

129 inding sequence containing two ARG boxes (39 bp) and residual sequences.

130 NA segments ranged from 1192 bp (S4) to 3958 bp (L1), encoding 12 viral proteins.

131 ed with rapid, large-scale ( approximately 4 bp) variations in DNA length.

132 e to the transcription start site (-17 to -4 bp).

133 an patients with small or no deletions (</=4 bp; 59 of 77 patients, 76.6%) in multivariate analysis (

134 f cognitive control was approximately 3 to 4 bps, demonstrating that cognitive control as a higher-le

135 ific cis-activation elements, termed Site 4 (bp -7997 to -7988) and Site 12 (bp -7835 to -7826).

136 Nucleotide sequence analysis revealed a 4-bp (AGTC) insertion in the oprD gene, resulting in a fra

137 , in part, to the small DNA fragments (</=40 bp) directly produced by high LET radiation, the size of

138 eferentially to DNA molecules longer than 40 bp, and two CAF1-H3-H4 complexes concertedly associate w

139 othesis, BoHV-1 DNA fragments (less than 400 bp) containing potential GR and KLF binding sites were i

140 s A23 has a linear compact genome of 395,405 bp, with a 33.62% G+C content.

141 The completed 629,409-bp 'Mnola' genome (Candidatus Mycoplasma girerdii str.

142 We also sequenced the complete mtDNA (16,423 bp) of four animals, two from each soil type.

143 oS transcription initiation sites located 43 bp (P1) and 63 bp (P2) upstream of the rpoS start codon.

144 At 263 431 bp, Uzinura has an extremely reduced genome that is comp

145 ngths of 178,262 bp, 171,045 bp, and 171,454 bp, respectively, and were phylogenetically closely rela

146 vel enhancer, located between +4517 and 4662 bp, but the luciferase reporter assay demonstrated that

147 Polymorphic small repeats (1-5 bp) had also higher expression divergence compared with

148 ured with short TRs (repeat unit length, 1-5 bp).

149 ion of hairpins such as loop lengths (of 4-5 bp) and stem lengths (of 7-15 bp).

150 ation events at both short ( approximately 5 bp) and long ( approximately 1 kb) genomic distances, sh

151 to the TSS, with 38 preferences tight (+/-5 bp).

152 ercoiling in fibers with L = 10n and 10n + 5 bp, different flexibility of the two types of fibers, an

153 DNA packaging step-size of approximately 2.5 bp, such that the step-size is probably determined by th

154 f nucleosomes separated by approximately 4/5 bp, placing nucleosomes on opposite faces of the DNA.

155 y and had large HSP110 T(17) deletions (>/=5 bp; 18 of 77 patients, 23.4%) had longer times of relaps

156 novel large insertions, small indels (10-50 bp), and short tandem repeat expansions and contractions

157 ttP and attB attachment sites are small (<50 bp), there are no host factor or DNA supercoiling requir

158 variants (SNVs) plus 0.7 million small (1-50 bp) insertions and deletions (indels) that are consisten

159 30,275 larger TRs (repeat unit length, 2-50 bp).

160 explore melting properties for short (</=50 bp) double-stranded DNA homopolymers.

161 short average length of approximately 25-50 bp, which is significantly shorter than the length of CO

162 Once single-end reads are at a length of 50 bp, the results do not change substantially for any leve

163 eriments to be carried out with short (36-50 bps), long (75-100 bps), single-end, or paired-end reads

164 Cost-saving short (50-bp) single-end reads and Nextera (R) library preparation

165 eccDNAs (<500 bp) than the larger ones (>500 bp) (p < 0.01).

166 ng mitochondrial DNA (mtDNA) haplotypes (500 bp), microsatellite genotypes (17 loci) and sex from 128

167 in human cells at the 1-3 nucleosome (50-500 bp) scale, obtained using ionizing radiation-induced spa

168 y higher GC content in smaller eccDNAs (<500 bp) than the larger ones (>500 bp) (p < 0.01).

169 ccumulation over the first approximately 500 bp, suggesting that Spt5 is required for transcription p

170 genomic DNA (gDNA) fragments of length >500 bp, and it can successfully discriminate single mismatch

171 n (2.7), and low linkage disequilibrium (500-bp) were observed in Chikhwawa District, Malawi, an area

172 f 31 BFU-E were heterozygous for CALR del 52 bp, and 1 of 31 BFU-E was homozygous for CALR del 52 bp.

173 -order repeat structure, named Nazca, of 528 bp, whereas CentPv2 is composed of tandemly organized mo

174 B virus (WSHBV) has a circular genome (3,542 bp) with the prototypical codon organization of hepadnav

175 e chromosome's relatively small size (16,569 bp) necessitates the ability to detect extremely focal e

176 ontaining variant T alleles at -1018 and -57 bp) exhibited the highest promoter activity.

177 bp (k'on = 2.1(1) x 10(6) M(-1) s(-1)) and 6 bp (k'on = 5.0(1) x 10(6) M(-1) s(-1)) sequences.

178 over the same 9 bp (koff = 0.024 s(-1)) to 6 bp (koff = 14 s(-1)) range.

179 aling of short regions of microhomology (2-6 bp) across the break-site.

180 sional diffusion constant, 26+/-1.8 x 10(6) (bp)(2) s(-1).

181 s highly enriched in short-size cfDNA (30~60 bp).

182 s) from literatures, and designed short (~60 bp) and long (~200 bp) amplicons for each of them.

183 s able to handle reads with both short (<600 bp) and long (>35 000 bp) insert sizes producing high-qu

184 ion involves step-like events of 200 nm (600 bp) size and is strongly suppressed by forces above 1 pN

185 t insertion sizes (approximately 350 bp, 600 bp, 3 kb, and 10 kb) of a Tennessee-accessed, glyphosate

186 ged on one long ribosomal RNA operon of 6000 bp) and clusters of such clusters (perhaps reflecting a

187 e and consists of a unique sequence (174,601 bp) flanked by a terminal direct repeat (2,910 bp).

188 nnealing linked with NHEJ, inserting 4 to 61 bp, mostly originating from the surrounding of breakpoin

189 n initiation sites located 43 bp (P1) and 63 bp (P2) upstream of the rpoS start codon.

190 n that it requires a minimal sequence of >65 bp; however, other than a GAGA motif, the three Fab-7 LB

191 anti-silencing properties for the small (679 bp) CBX3-UCO element and we now confirmed this observati

192 t to generate high-quality large-insert (680 bp) paired-end libraries using a range of 50 pg to 50 ng

193 is gene, the DNA sequence from -2612 to +682 bp (relative to the transcription start site) of the JDP

194 urth (YSLGV), with a genome length of 73,689 bp, was related to group III in the extended family Mimi

195 on, and had a mean fragment size of only 699 bp--close to single-enhancer resolution.

196 Targeted genomic deletion (<7 bp) of the MITF motif within the MET enhancer suppressed

197 A conjugative plasmid of 55,706 bp (pBRZ01) carrying the vanA cluster was identified and

198 e used 344 mitochondrial control region (717 bp) sequences from the finless porpoise (genus Neophocae

199 etic enhanced green fluorescent protein (720 bp) clones from 0.93% to 83.22%, corresponding to a decr

200 cies, Diabrotica virgifera virgifera (16,747 bp) and Diabrotica barberi (16,632; Insecta: Coleoptera:

201 arated by one small single copy (SSC; 18,758 bp) and one large single copy (LSC; 89,132 bp).

202 2, TL increased in the intervention arm (+76 bp) and decreased in the controls (-23 bp) (p=0.050).

203 777 and -105 bp (region A) and -921 and -796 bp (region B), respectively, as responsible for the high

204 fficient TALE-VP64s bound around -120 to -80 bp, while highly effective sgRNAs targeted from -147 to

205 one pair of inverted repeats (IRs) of 26,819 bp, which were separated by one small single copy (SSC;

206 ed that the shorter (345 bp) and medium (827 bp) fragments of nsLTP promoter function as grain-specif

207 onstructed HBV haplotypes in a region of 836 bp, which contains the major immune epitopes and drug re

208 ic primers that amplify fragments (horse; 85 bp, soybean; 100 bp, sheep; 119 bp, poultry; 183 bp, por

209 Unambiguously aligned sequences (13,872 bp) from those 16 species plus 78 percomorphs and two ou

210 s produced 16,115 contigs with an N50 of 889 bp, over 90% of which has significant sequence similarit

211 sly reported enhancer region (-9435 to -8922 bp).

212 e duplex, with a 2.5-fold increase between 9 bp (k'on = 2.1(1) x 10(6) M(-1) s(-1)) and 6 bp (k'on =

213 , varying by nearly 600-fold over the same 9 bp (koff = 0.024 s(-1)) to 6 bp (koff = 14 s(-1)) range.

214 Here, we show that small (5-9 bp) inverted repeats drive the formation of large palind

215 order of magnitude when positioned close (9 bp) to the promoter, in comparison to that for a distal

216 edian deletion size using single sgRNAs is 9 bp, we also obtain large deletions of up to 600 bp.

217 using de novo assembly of massive short (90 bp), paired-end or single-end reads.

218 recognition sites are separated by up to 90 bp, Fis represses IHF binding and weak DnaA interactions

219 he model yields a speed of DNA uptake of 900 bps(-1) and a reversal force of 17 pN.

220 ) flanked by a terminal direct repeat (2,910 bp).

221 utions per site within the concatenated (945 bp) nucleotide dataset, implying that probabilistic phyl

222 SuRCA), with an N50 scaffold size of 464 955 bp (based on a genome size of 606 Mbp), 221 640 contigs

223 hs of TmELO1 and TmELO2 were 1005 bp and 972 bp, respectively and the corresponding peptide sequences

224 a hypoxia response element (HRE) located at bp -190 upstream of the transcription start site.

225 ously explained by an initial >457 basepair (bp) HSV-1 x HSV-2 crossover followed by back-recombinati

226 y Huguet et al., the reconstructed basepair (bp) free energies agree with the running average of the

227 large soil metagenomes totaling 398 billion bp (equivalent to 88,000 Escherichia coli genomes) from

228 ding stronger preferences for A*T versus G*C bps, TA versus GG steps, and also suggests enrichment at

229 ttery dating from about 15,000 to 11,800 cal bp (the Incipient Jomon period), the oldest pottery so f

230 12,000 calibrated years before present (cal bp), towards the end of the Late Pleistocene epoch, a pe

231 s in an increase of approximately 1 degrees /bp (or a superhelical density of Deltasigma approximatel

232 th an array of Shockley partial dislocations bp:-bp on every basal plane and the 30 degrees twist GB

233 als that in both cases, m1A forms a m1A*T HG bp, which is accompanied by local and global structural

234 ere, we use structural features unique to HG bps (syn purine base, HG hydrogen bonds and constricted

235 To gain insights into transient HG bps, we used solution-state nuclear magnetic resonance s

236 anscription, which are found within areas I (bp -2694 to -2561), II (bp -2139 to -1958), III (bp -187

237 ound within areas I (bp -2694 to -2561), II (bp -2139 to -1958), III (bp -1879 to -1799), and IV (bp

238 pairs (bp) -8118/-7750) of MafA and Area II (bp -2153/-1923) of the Pdx1 gene.

239 2694 to -2561), II (bp -2139 to -1958), III (bp -1879 to -1799), and IV (bp -6200 to -5670).

240 Mean TL (in bp) was associated with exclusive breastfeeding at 4-6 w

241 to -1958), III (bp -1879 to -1799), and IV (bp -6200 to -5670).

242 , many of which became extinct around 10 kyr bp (before present).

243 lilee, Israel) and dated to 54.7 +/- 5.5 kyr bp (arithmetic mean +/- 2 standard deviations) by uraniu

244 During the Last Glacial Maximum (25-15 kyr bp), diversity declined markedly, although forbs remaine

245 d radiocarbon years before present (cal. kyr bp), glacial retreat opened an approximately 1,500-km-lo

246 Much changed after 10 kyr bp, with the appearance of moist tundra dominated by woo

247 ence of moose and elk at about 11.5 cal. kyr bp, and boreal forest approximately 10 cal. kyr bp.

248 glaciated North America before 12.6 cal. kyr bp, are unlikely to have travelled by this route into th

249 n and mammoth by approximately 12.6 cal. kyr bp, followed by open forest, with evidence of moose and

250 the stabilization of low-boiling point (low-bp) perfluorocarbons (PFCs) at physiological temperature

251 assemblies (3 M bp) and Mongolian horse (2 M bp) were also sequenced and de novo assembled.

252 Y chromosome from wild horse assemblies (3 M bp) and Mongolian horse (2 M bp) were also sequenced and

253 These multi-bp, compound steps are comprised of 1 bp substeps.

254 Both sets of genes share an 11-base pair (bp) activator motif.

255 The 4292 base pair (bp) cDNA includes a 3510 bp open reading frame encoding

256 d dystrophy (adCORD) caused by 12 base pair (bp) deletion at proline 351 of hAIPL1 (P351Delta12) muta

257 rmed that cats homozygous for a 2 base pair (bp) deletion within IQ calmodulin-binding motif-containi

258 We oxidized a 32 base pair (bp) double-stranded (ds) oligonucleotide representing ex

259 d complexed with two different 22-base pair (bp) double-stranded operator sequences (oligos AT and AA

260 We discovered a 73-base pair (bp) insertion in the cDNA of the resistant strain that g

261 associated with approximately 80 base pair (bp) of DNA, which is located at a position that correspo

262 compared the processing of a 460 base pair (bp) perfect palindrome in the Escherichia coli chromosom

263 to evaluate whether the HLA-G 14-base pair (bp) polymorphism (rs16375) has an impact on human immuno

264 sing optical tweezers with single base pair (bp) resolution, we analyzed DNA unwinding by XPD helicas

265 e, recognizes a palindromic eight base pair (bp) symmetric sequence, 5-ATTTAAAT-3, and cleaves that t

266 Each peak-pair has a unique 93 base pair (bp)-long (+/-2 bp) ArgR-binding sequence containing two

267 We found a rare noncoding 12-base-pair (bp) deletion (del12) in intron 4 of ASGR1, which encodes

268 xon 18 of BRCA1, we replace a six-base-pair (bp) genomic region with all possible hexamers, or the fu

269 ptical-trapping assay featuring 1 base-pair (bp) precision.

270 lite sequences, including the 359-base-pair (bp) repeat sequence, recruited HP1a at the MBT.

271 nding within conserved Region 3 (base pairs (bp) -8118/-7750) of MafA and Area II (bp -2153/-1923) of

272 es short paired-end tags (2 x 20 base pairs (bp)) to detect two genomic loci that are far apart on li

273 N cDNA sequence consists of 4226 base pairs (bp), comprising a 522-bp 5' untranslated region (UTR), a

274 of intervention (difference -163 base pairs (bp), p=0.001).

275 Importantly, Hmo1 extended 20-50 base pairs (bp) downstream from Fhl1.

276 ble-stranded DNA (dsDNA) over 40 base pairs (bp) in length has been considered immunostimulatory.

277 pproximately 99% and length 6050 base pairs (bp) in the human genome, and 16 Tol2 elements of identit

278 protein (ZF6-DB) that targets 20 base pairs (bp) of a RHOcis-regulatory element (CRE) and demonstrate

279 nslocations have between 0 and 4 base pairs (bp) of microhomology (n = 26), short inserted sequences

280 ajority of the approximately 270 base pairs (bp) of vector space required for shRNA expression.

281 encing short fragments of 50-100 base pairs (bp) that accumulate in long internucleosome linker regio

282 ly bell-shaped with a peak at 50 base pairs (bp) upstream of the transcription start site (TSS) and 8

283 a T/S ratio and was converted to base pairs (bp).

284 ielded an unique amplicon of 712 base pairs (bp).

285 oligonucleotides longer than 20 base pairs (bp).

286 double helix, Watson-Crick (WC) base pairs (bps) exist in dynamic equilibrium with sparsely populate

287 map since short reads of 50-100 base pairs (bps) from these regions map to multiple locations in ref

288 behind a footprint of up to five base pairs (bps) of the original VH gene that is often further obscu

289 Hoogsteen (HG) base pairs (bps) provide an alternative pairing geometry to Watson-C

290 Hg and/or a diastolic BP >/= 90 (HTN(doc,pat,bp)) and diagnosis according to the National Health and

291 11,100 to 10,700 (14)C years before present (bp) (13,000 to 12,600 calendar years bp).

292 and 40 thousand years (kyr) before present (bp), replacing all other forms of hominins.

293 going as far back as 7000 yr before present (bp).

294 te of cognitive control (in bits per second, bps) in the model fitting to estimate the capacity of co

295 and constricted C1'-C1' distance across the bp) to search for HG bps in X-ray structures of DNA dupl

296 -5-FX interaction with FX-binding protein (X-bp) inhibited transduction in the presence of C57BL/6 se

297 uman bones date to 10,705 +/- 35 (14)C years bp (approximately 12,707-12,556 calendar years bp) and w

298 rian ended by 41,030-39,260 calibrated years bp (at 95.4% probability) across Europe.

299 (approximately 12,707-12,556 calendar years bp) and were directly associated with Clovis tools.

300 resent (bp) (13,000 to 12,600 calendar years bp).