ライフサイエンスコーパス: cDNA array

1 bridized to all but two of the probes in the cDNA array.

2 op designed microarray experiment using a 4k-cDNA array.

3 bridization intensities of the probes on the cDNA arrays.

4 ive study of gene expression utilizing human cDNA arrays.

5 f false positives with radioactively-labeled cDNA arrays.

6 of differential display and high-sensitivity cDNA arrays.

7 weeks using high-density nylon filter-based cDNA arrays.

8 ese, seven were positive by hybridization to cDNA arrays.

9 hese astrocytes were examined with Atlas rat cDNA arrays.

10 lot analysis on 120 selected mRNAs on custom cDNA arrays.

11 pression of over 120 genes, as identified by cDNA arrays.

12 rom these fractions were used to interrogate cDNA arrays.

13 enerate probes for differential screening of cDNA arrays.

14 sing chromatin immunoprecipitation linked to cDNA arrays.

15 risk, LCM-LA RNA from ACF was hybridized to cDNA arrays.

16 n gene expression levels were analyzed using cDNA arrays.

17 eveloping wheat caryopses was analyzed using cDNA arrays.

18 nt transcripts, which can now be detected on cDNA arrays.

19 ion of distinct subsets of mRNAs detected by cDNA arrays.

20 with those obtained using complementary DNA (cDNA) arrays.

21 an cells and genomic profiling by array-CGH (cDNA arrays, 100 kb resolution) and by real-time PCR (si

22 f each sample were then hybridized with 5760 cDNA arrays (5289 unique cDNA sequences) printed on indi

23 r of technical replicates for Affymetrix and cDNA arrays, achieving variance stabilization can be dif

24 ts obtained by quantitative real-time PCR or cDNA array analyses by using a total of 43 lung tumor an

25 Lastly, cDNA array analyses indicate that several hematopoietic

26 cDNA array analyses revealed that alterations in gene ex

27 ne expression were determined by comparative cDNA array analyses, and the approach was validated by i

28 cDNA array analyses, together with real time PCR, reveal

29 y extracellular matrix and adhesion molecule cDNA array analysis and confirmed by real-time quantitat

30 n examined patterns of gene expression using cDNA array analysis and Restriction Landmark Genomic Sca

31 ne in lung, FIZZ1/RELMalpha, first through a cDNA array analysis and then confirmed by RT-PCR.

32 Using cDNA array analysis for differential gene expression, we

33 cDNA array analysis further revealed that genes ontologi

34 at evaluation of mRNA expression profiles by cDNA array analysis is a powerful approach to characteri

35 utions to gene expression are assessed using cDNA array analysis of an en masse nuclear run-on assay

36 We previously did cDNA array analysis of LGD1069-treated breast cells usin

37 cDNA array analysis of Mac-1-clustered compared with -no

38 downstream targets, we performed Affymetrix cDNA array analysis of Monc-1 cells and identified a gen

39 cDNA array analysis of RNA from cells overproducing the

40 cDNA array analysis of the polyribosome fraction demonst

41 ination of laser capture microdissection and cDNA array analysis provides a powerful new tool to unra

42 cDNA array analysis showed that eugenol caused deregulat

43 ting a set of genes previously determined by cDNA array analysis to be rapidly up-regulated by LAQ824

44 ntisense RNA amplification was combined with cDNA array analysis to examine effects of aging on D1-D5

45 We then used differential cDNA array analysis to investigate the molecular changes

46 racted sufficient total RNA (3-6 microg) for cDNA array analysis using HgU95-Av2 GeneChip.

47 total RNA (3 to 6 microg) was extracted for cDNA array analysis using the Affymetrix HgU95-Av2 GeneC

48 cDNA array analysis was used to identify large-scale cha

49 By cDNA array analysis, 334 of 4132 genes studied were expr

50 By cDNA array analysis, ADAMTS8, ECM1, MMP8, PLAU, SELP, an

51 To test these ideas, we have made use of the cDNA array analysis, which can provide a more global vie

52 xpression of the subset of genes examined by cDNA array analysis.

53 (d) gene expression changes as determined by cDNA array analysis.

54 ion methodology coupled with custom-designed cDNA array analysis.

55 hemistry, RT-PCR, and membrane-based focused cDNA array analysis.

56 levels of HNF6 targets in the liver using a cDNA array and found that their expression was similar i

57 We screened a cDNA array and identified the bCL2 family member A1/BFL1

58 cDNA array and immunoblot analysis of gene expression re

59 We show by cDNA array and immunohistochemical analysis that EGF, EG

60 expression was examined 2 hours later using cDNA array and reverse transcriptase-polymerase chain re

61 and high-throughput screening methods using cDNA array and tissue microarray (TMA) technology, there

62 cDNA array and tumor microarray analysis shows that mRNA

63 red with the PC-3 low invasive cells through cDNA array and Western blot analyses.

64 ith FKN mRNA being subsequently evaluated by cDNA array and/or RT-PCR and FKN protein by enzyme-linke

65 resultant upregulated genes were screened by cDNA arrays and confirmed by quantitative real-time poly

66 istical methods that have been developed for cDNA arrays and describe how the methods can be directly

67 onchoalveolar lavage cells with high density cDNA arrays and found that CXCR4 mRNA is increased in pa

68 Using cDNA arrays and quantitative PCR, we discovered nine gen

69 Using human cDNA arrays and ribonuclease (RNase) protection assays,

70 Differential hybridization of cDNA arrays and RNase protection studies determined that

71 essed in ovarian cancer through studies with cDNA arrays and serial analysis of gene expression.

72 is accompanied by up-regulation of A1 on the cDNA array, and this up-regulation was confirmed by semi

73 ed RNA from isolated microglia with relevant cDNA arrays, and identified approximately 30 transcripts

74 By using human cDNA arrays, approximately 2,000 putatively differential

75 Since cDNA arrays are being increasingly used to rapidly disti

76 Here, expression data from cDNA arrays are ranked and curve-fitted.

77 The cDNA array-based approach described here can be applied

78 cDNA array-based approaches to assess the stability and

79 traits, we have extended the application of cDNA array-based comparative genomic hybridization (aCGH

80 llular genes influenced by LANA, we employed cDNA array-based expression profiling.

81 hip, Affymetrix) with a laboratory-developed cDNA array by assaying test RNA samples from an experime

82 We have expanded the utility of cDNA arrays by using them to assist in elucidating combi

83 ndicate that studies of gene expression with cDNA arrays can aid the discovery of leukemia markers.

84 Our results demonstrate that cDNA arrays can be effectively used to identify new diag

85 mparative genomic hybridization performed on cDNA arrays (cDNA aCGH) is a common method to investigat

86 the progression of breast carcinoma, we did cDNA array comparative genomic hybridization (CGH) on a

87 n profiles were also generated using a mouse cDNA array composed of 4000 elements representing known

88 These were hybridized to cDNA arrays comprising 268 genes and exposed to x-ray fi

89 ression analysis was performed using a novel cDNA array consisting of 277 genes functionally associat

90 anges associated with AMPH toxicity, we used cDNA arrays consisting of 1176 genes to detect different

91 of macaque aorta and vena cava media using a cDNA array containing 4048 known human genes, approximat

92 mplified, [33]P-labeled, and hybridized to a cDNA array containing 4325 known genes.

93 of ARE-mediated mRNA turnover with a custom cDNA array containing probes for 950 ARE mRNAs.

94 AML vs normal probes were then hybridized to cDNA arrays containing genes related to cancer and apopt

95 n reading frames (ORFs) and also constructed cDNA arrays containing probes designed to detect all kno

96 ation function that improves the accuracy of cDNA array data.

97 Our previously reported cDNA array datasets from neonatal wild-type and Cx43-/-

98 cDNA array detected 76.9% of the differentially expresse

99 isplay (DD) to detect global differences and cDNA arrays enriched for cancer-associated genes using m

100 to normal pancreatic tissue in our previous cDNA array experiments prompted us to look in more detai

101 cDNA array expression analysis of known genes identified

102 all, these data support the effectiveness of cDNA array expression profiling to investigate the pleio

103 be revealed through analysis of differential cDNA array expression.

104 xpression, we have constructed a specialized cDNA array for the study of ovarian cancer.

105 Clonal populations were analyzed by cDNA array gene expression analysis, which showed differ

106 We apply the method to Atlas cDNA arrays, GeneFilters, and Affymetrix GeneChip.

107 chain reaction (RAP-PCR) fingerprinting and cDNA arrays (here termed "RAP-array") to identify genes

108 pression was detected in many tumor types by cDNA array hybridization analysis, and TWEAK protein exp

109 GSE-induced drug resistance were analyzed by cDNA array hybridization and reverse transcription-PCR.

110 cDNA array hybridization showed that p21 expression sele

111 s of different origin and p53 status using a cDNA array hybridization technique.

112 In this study, we have used cDNA array hybridization to identify genes regulated by

113 Using cDNA array hybridization, the expression profiles of the

114 human dermal endothelial cells (HDMEC) using cDNA array hybridization.

115 levels of gene expression as observed in the cDNA array hybridization.

116 lines were simultaneously monitored using a cDNA array hybridization.

117 n of their expression could be made from the cDNA array hybridization.

118 nd HuR-bound target mRNAs were identified by cDNA array hybridization.

119 of several differentially expressed genes in cDNA array (I-kappaB, VCAM-1 and MIP-3) were further con

120 of 1200 selected mouse genes using the Atlas cDNA array in highly purified hematopoietic stem cells (

121 In this study we used cDNA arrays in an attempt to identify genes that exhibit

122 Comparative hybridization of cDNA arrays is a powerful tool for the measurement of di

123 onal difference analysis (RDA) combined with cDNA arrays is an effective approach to identify differe

124 ial cells (HBMECs) by using a human cytokine cDNA array kit.

125 rrayed collections of genome-scale siRNA and cDNA arrayed libraries enable the comprehensive global a

126 alysis of mRNA expression data obtained from cDNA array methods.

127 ser capture microdissection and high density cDNA arrays now provides a unique opportunity to generat

128 c cell lines and in primary AML blasts using cDNA arrays, oligonucleotide arrays and real-time revers

129 ession were assessed by using 4,146 cellular cDNAs arrayed on nitrocellulose filters and real-time re

130 han one method (U133 oligonucleotide arrays, cDNA arrays or serial analysis of gene expression), and

131 problem through development of a three-color cDNA array platform whereby printed probes are tagged wi

132 ntical reference RNA source to a custom-made cDNA array platform.

133 125) genes evaluated on the custom-designed cDNA array platform.

134 icroarray platforms, oligonucleotide arrays, cDNA arrays printed on glass slides and cDNA arrays prin

135 ays, cDNA arrays printed on glass slides and cDNA arrays printed on nylon membranes.

136 Multimeric cDNA arrays probably arise during chromosomal break repa

137 f both Affymetrix and printed 75mer oligomer cDNA arrays produced from the same samples provides an o

138 Assessment of cDNA array profiles should further help us to design a w

139 cDNA array profiling demonstrated clustering with sporad

140 2 hours posthepatectomy was examined with a cDNA array representing 588 highly regulated mouse genes

141 We used cDNA arrays representing 588 genes to investigate the ro

142 The cDNA array results were confirmed by Northern and Wester

143 on of a large number of genes displayed on a cDNA array revealed that significant changes in gene exp

144 In addition, regular mRNA profiling with cDNA arrays revealed correlations between mRNA and H3K9m

145 d comparative genomic hybridization (CGH) to cDNA arrays revealed specific somatic genetic alteration

146 Interrogation of cDNA arrays revealed that platelet-derived mRNAs are pri

147 High density cDNA array screening of colon, lung, and breast cancer c

148 DISH genes were also evaluated by microchip cDNA array screening.

149 m our serial analysis of gene expression and cDNA array studies for their relevance to ovarian cancer

150 cible, robust, and cost-effective customized cDNA array system based on established nylon membrane te

151 oding the cell cycle protein p55Cdc by using cDNA array technique.

152 00 human genes were analyzed and compared by cDNA array techniques.

153 g PCR-selected subtractive hybridization and cDNA array techniques.

154 g PCR-selected subtractive hybridization and cDNA array techniques.

155 cDNA array technology has proven to be a powerful way to

156 ssion in three glioblastoma cell lines using cDNA array technology in which the expression of 588 cel

157 We have used cDNA array technology to characterize the differences in

158 out a gene expression profiling study using cDNA array technology with 24 primary glioma tissues of

159 hen gene expression was analyzed on a custom cDNA array that contained 2304 known genes, infection wi

160 sly identified a small number of genes using cDNA arrays that accurately diagnosed patients with Seza

161 We prepared cDNA arrays that are specifically enriched for genes exp

162 Using human cDNA arrays that contained 41,126 cDNAs, corresponding t

163 ith an average insert size of 34 kbp against cDNA arrays, the density of previously characterized exp

164 The use of this cDNA array to analyze RAP-PCR fingerprints allowed for a

165 of human tumor using Atlas human cancer 1.2 cDNA array to analyze the expression profile of 1187 tum

166 urvival molecule, midkine, was identified by cDNA array to be expressed only in drug-resistant cells.

167 re first analyzed using an erythroid-focused cDNA array to define steady-state transcription levels.

168 the parent cell line SKOV-3, was analyzed by cDNA array to evaluate transcript expression profiles.

169 rly events in lung carcinogenesis, we used a cDNA array to screen for genes that are expressed differ

170 approach that extends the current utility of cDNA arrays to allow the evaluation of the relative role

171 ort, we have tested the feasibility of using cDNA arrays to compare the global changes in expression

172 nscribed, labeled, and used to hybridize 10K cDNA arrays to determine biomarkers for confluence state

173 By using cDNA arrays to examine global p53-dependent gene express

174 Here, we used cDNA arrays to examine transcript profiles in Medicago t

175 Here, we used pathway-focused cDNA arrays to identify additional T. gondii-regulated t

176 In this paper, we describe the use of cDNA arrays to identify subsets of mRNAs contained in en

177 nt of research has been devoted to two-color cDNA arrays to improve experimental design, normalizatio

178 We used cDNA arrays to investigate differentially expressed gene

179 We have used cDNA arrays to investigate gene expression patterns in p

180 This study has used large-scale cDNA arrays to monitor changes in gene expression patter

181 Using the Atlas Human Cancer 1.2 cDNA arrays to quantitate gene expression in the 31 tumo

182 We used Atlas cDNA arrays to study gene expression profiles after ER a

183 Mouse Genome 430 2.0 GeneChip and a spotted cDNA array using a mouse model of angiotensin II-induced

184 l problem, we constructed a new multiprimate cDNA array using probes from human, chimpanzee, oranguta

185 Hybridization of cDNA arrays using RNA from each fraction revealed a subs

186 Some types of microarray, such as cDNA arrays, usually contain a considerable portion of m

187 The bias observed with cDNA arrays was predictable for fold-changes <250-fold b

188 e bacteria, hybrid selection on high density cDNA arrays was used to characterize the mRNA expression

189 RNA expression changes profiled on the same cDNA array, we detected very little consistent contribut

190 With the use of the Clontech Atlas Rat cDNA Array, we further discovered that the gene expressi

191 Using a matched normal/tumor cDNA array, we identified a reduced expression of BCCIP

192 ranscription and mRNA amplification to probe cDNA arrays, we found that neurotrophin-3 (NT3) and trkB

193 In this report, using cDNA arrays, we have examined the changes in gene expres

194 AMH expression profiles obtained by SAGE and cDNA arrays, we observed numerous quantitative discrepan

195 Using high-density cDNA arrays, we profiled gene expression of small cell l

196 The cDNA arrays were hybridized with fluorescent labeled pro

197 fold-change measurements generated by custom cDNA arrays were more accurate than those obtained by co

198 cDNA arrays were used to examine gene induction in CALU-

199 cDNA arrays were used to identify p53-responsive genes f

200 Here, we used a cDNA array with 9240 clones relevant to cancer biology a

201 Using Atlas cancer cDNA arrays with 588 cancer-related genes, we describe g

202 he virtues of probing commercially available cDNA arrays with either radiolabeled cDNA pools or radio

203 erns by interrogating commercially available cDNA arrays with labeled target cDNA prepared from poole

204 were used for comparative hybridizations to cDNA arrays with pooled mRNA from normal cells.