ライフサイエンスコーパス: catfish

1 organs and tissues from the same individual catfish.

2 one vertebrate ancient (VA) opsin gene from catfish.

3 r large-scale comparative genome analysis in catfish.

4 not yet available for many species including catfish.

5 approximately the genome size of the channel catfish.

6 regions of the forebrain (FB) in the channel catfish.

7 L5 cDNAs, L5a and L5b, were found in channel catfish.

8 7, for which two cDNAs were found in channel catfish.

9 y of selective breeding programs for channel catfish.

10 divergence of oocyte TFIIIA from the channel catfish.

11 ounts for the evolutionary loss of scales in catfish.

12 esce in the same manner as the affected blue catfish.

13 the intestinal mucosal immune system of the catfish.

14 he intestinal epithelia of orally inoculated catfish.

15 s that had not been previously identified in catfish.

16 in sex determination and differentiation in catfish.

17 ibiotics (sulfonamides and tetracyclines) in catfish.

18 ctive effects against E. ictaluri in striped catfish.

19 micry in a species-rich group of neotropical catfishes.

20 n identified in Ictalurus punctatus (channel catfish), a well characterized immunological model syste

21 rginine (L-Arg), a potent taste stimulus for catfish, activated a nonselective cation conductance in

22 ed as Bacillus CFU/g of intestinal tissue of catfish after feeding Bacillus spore-supplemented feed f

23 ied out to estimate the istihalah period for catfish after feeding with pig offal, based on the absen

24 Two types of catfish alloantigen-dependent cytotoxic T cells were clo

25 e resource of ESTs is to become available in catfish allowing identification of large number of SNPs,

26 The channel catfish alpha-actin gene is associated with two distinct

27 ors, which are found in most teleost fishes, catfish also possess a total of over 4000 electrorecepti

28 Amino acid conservation in catfish, amphibian, and human TFIIIA zinc fingers allows

29 Subsequent catFISH analyses revealed that in the DH, cells were pre

30 Replicate analysis of catfish and chicken eggs by the QISTMS method produced c

31 QISTMS distinguished between catfish and chicken eggs with elevated TCDD levels from

32 CC41 to monitor viral cytotoxic responses in catfish and determine that CC41 binds to a subset of LIT

33 e, acutely dissociated horizontal cells from catfish and goldfish.

34 approach may produce growth-enhanced channel catfish and increase productivity.

35 r motifs, and activate transcription in both catfish and murine cells.

36 This opsin, identified in channel catfish and termed parapinopsin, defines a new gene fami

37 served syntenies identified here between the catfish and the three model fish species should facilita

38 Catfish TFIIIA was able to bind the catfish and Xenopus 5S RNA genes but did not efficiently

39 s is not fully understood, but evidence from catfish and zebrafish indicates major roles for octamer-

40 n similarities in the FBA sequences with the catfish and zebrafish NCCRP-1 peptides.

41 Putative conserved syntenies between catfish and zebrafish, medaka, and Tetraodon were establ

42 like fish), Gadiformes (cods), Siluriformes (catfish), and Salmoniformes (salmonids).

43 ary in the alpha subunits of the bovine rod, catfish, and rat olfactory channels.

44 ease control as probiotic feed additives for catfish aquaculture.

45 Most ribosomal protein mRNAs in channel catfish are highly similar to their mammalian counterpar

46 Most 40S RPs in channel catfish are highly similar to their orthologues in mamma

47 Peripheral waves (PWs) in the channel catfish are odorant-induced neural oscillations of synch

48 W analyses showed that mutational targets in catfish are restricted when compared with the spectrum o

49 ndent invasions of freshwaters by marine Sea Catfishes (Ariidae), rates of both morphological dispari

50 d from peripheral blood cells of the channel catfish, as well as on lymphocyte-like cells, but not on

51 found in mince of Nile tilapia and broadhead catfish at levels of 1.5 and 3.2mug/kg, respectively.

52 c helix-loop-helix family were cloned from a catfish B cell cDNA library in this study, and homologs

53 (alpha and beta) were cloned by screening a catfish B cell cDNA library.

54 this study, IgM(+)/IgD(+) and IgM(-)/IgD(+) catfish B cell populations were identified through the u

55 In catfish B cells, CFEB1 and -2 also activated transcripti

56 certain octamer sites, destroyed function in catfish B cells.

57 the activation and proliferation of channel catfish B cells.

58 rations of four species of Amazonian goliath catfishes (Brachyplatystoma rousseauxii, B. platynemum,

59 h genome database, cBARBEL (abbreviated from catfish Breeder And Researcher Bioinformatics Entry Loca

60 nce study, LSU-E2 was able to invade channel catfish by the immersion route and persist in internal o

61 The catfish CB genes are approximately 36% identical at the

62 anscription of the Cec B promoter in channel catfish cells exhibited an inducible pattern and could b

63 ct2 activated transcription in mouse but not catfish cells.

64 In catfish, ciliated ORNs express OR-type receptors and Gal

65 d social air-breathing in African sharptooth catfish Clarias gariepinus, to determine whether individ

66 African catfish (Clarias gariepinus) are commonly consumed in Ma

67 ytic activity of viscera extract from hybrid catfish (Clarias macrocephalus x Clarias gariepinus) was

68 Frigate mackerel (Auxis thazard) and catfish (Clarias macrocephalus) can be used as alternati

69 ctivity was investigated in the brain of the catfish, Clarias batrachus.

70 analyzed, of these eight were used by the 11 catfish clonal alloantigen-dependent T cell lines.

71 Importantly, transfection of catfish clonal B cells demonstrated that this leader med

72 binds to a subset of LITRs on the surface of catfish clonal CTLs.

73 levels of IpFcRI expression were detected in catfish clonal leukocyte cell lines.

74 the phenotypes of cytotoxic cells in channel catfish, clonal alloantigen-dependent leukocyte lines we

75 oth cAMP and cGMP derived from the BD of the catfish CNGA4 olfactory modulatory subunit (fCNGA4).

76 ed by visceral alkaline-proteases from Giant catfish, commercial trypsin, and Izyme AL(R).

77 s (common barbel, Pontic shad, European wels catfish, common bleak) was evaluated by thermal methods.

78 ation of an ionotropic glutamate receptor on catfish cone horizontal cells is linked to calcium relea

79 ctivation of ionotropic kainate receptors on catfish cone horizontal cells triggered CICR from ryanod

80 We found that light induced a response in catfish cone horizontal cells, but not rod horizontal ce

81 mammals, the secondary gustatory nucleus of catfish consists of several cytoarchitectonically distin

82 Outbred populations of channel catfish contained an average of eight alleles per locus

83 ch in protein (93.1-93.8%), whilst broadhead catfish contained protein (55.2-59.5%) and lipid (36.6-4

84 The visceral peptidase from farmed giant catfish could be an alternative protease for generating

85 ore, PI from both Nile tilapia and broadhead catfish could serve as the promising proteinaceous mater

86 Both types of catfish CTL form conjugates with and kill targets by apo

87 These results suggest that catfish CTL show heterogeneity with respect to target re

88 sh NCCRP-1 antigen-binding domain inhibited (catfish) cytotoxicity toward conventional tumor target c

89 Thus, catfish deltam transcripts appear to originate from IGHD

90 Coding region motifs of catfish DH segments are phylogenetically conserved in so

91 of other fluorescent compounds isolated from catfish eggs and ovaries.

92 Blue catfish eggs are normally cream to light yellow.

93 variant, ATGtAAAT, which occurs twice in the catfish enhancer.

94 he causative agents of enteric septicemia of catfish (ESC) and motile aeromonad septicaemia (MAS), re

95 ish linkage, physical and integrated maps, a catfish EST contig viewer with SNP information overlay,

96 ue genes matched previously reported channel catfish ESTs while 847 (44.4%) ESTs representing 261 uni

97 Mining of the catfish expressed sequence tag databases using mammalian

98 mated that the minimum quarantine period for catfish fed with pig offal is 1.5days.

99 gut and to suggest the quarantine period in catfish fed with pig offal.

100 hybrid catfish produced by crossing channel catfish females with blue catfish males exhibit a number

101 Channel catfish skin is a by-product from catfish fillet production.

102 t a dose of 8x10(7) CFU/g and fed to channel catfish for 14 days before they were challenged by E. ic

103 stitute the preferred codon usage of channel catfish for the native sequences of the genes.

104 ty using fluorescence in situ hybridization (catFISH) for Arc mRNA.

105 ons is difficult in nonmodel species such as catfish, functional genome analysis will have to rely he

106 Peruvian sea catfish (Galeichthys peruvianus) sagittal otoliths prese

107 Identification of the catfish gene as delta is based on the following properti

108 crosatellite loci were identified in channel catfish gene sequences or random clones from a small ins

109 Functional categorization of the channel catfish genes indicated that the largest group was ribos

110 ly should facilitate functional inference of catfish genes.

111 ome, and opens ways for facilitating channel catfish genetic enhancement and functional genomics.

112 ive, integrative platform for all aspects of catfish genetics, genomics and related data resources.

113 A genetic linkage map of the channel catfish genome (N = 29) was constructed from two referen

114 A genetic linkage map of the channel catfish genome (N=29) was constructed using EST-based mi

115 The catfish genome database, cBARBEL (abbreviated from catfi

116 As catfish genome sequencing proceeds and ongoing quantitat

117 ighly efficient tool for editing the channel catfish genome, and opens ways for facilitating channel

118 nd Merman elements exist per haploid channel catfish genome, respectively.

119 n overlay, and GBrowse-based organization of catfish genomic data based on sequence similarity with z

120 hyrotropin-releasing hormone receptor or the catfish GnRH-R are also phosphorylated in an agonist-dep

121 n-releasing hormone receptor and the African catfish GnRH-R, both of which have a C-terminal tail, ar

122 that codes for a granzyme homologue, channel catfish granzyme-1 (CFGR-1), from nonspecific cytotoxic

123 Ictalurus punctatus (channel catfish) granzyme cDNA encodes a protein with approximat

124 ig offal, based on the absence of pig DNA in catfish gut and to suggest the quarantine period in catf

125 Among predators, adult Blue Catfish had low MC concentrations, whereas Blue Crabs ex

126 Catfish has a male-heterogametic (XY) sex determination

127 octamer motifs in the Emu3' enhancer of the catfish has been shown to be particularly important in d

128 DNA derived from the spleen of an individual catfish has shown that somatic mutation occurs within bo

129 For example, some catfish have <5% IgM(-)/IgD(+) B cells in their PBLs, wh

130 The taste system of catfish, having distinct taste receptor sites for L-alan

131 Ictalurid herpesvirus 1 (channel catfish herpesvirus [CCV]) is economically very importan

132 Channel catfish Ictalurus punctatus express two Ig isotypes: IgM

133 The primary olfactory projections of channel catfish Ictalurus punctatus have been examined with post

134 red eggs in the ovaries of adult female blue catfish (Ictalurus furcatus) from the northern arm of Eu

135 aluri, a host-restricted pathogen of channel catfish (Ictalurus punctatus) and the main pathogen of t

136 AC) contig-based physical map of the channel catfish (Ictalurus punctatus) genome was generated using

137 The Ig heavy chain enhancer of the channel catfish (Ictalurus punctatus) has an unusual position an

138 ster of H chain gene segments in the channel catfish (Ictalurus punctatus) has been determined.

139 revious molecular genetic studies on channel catfish (Ictalurus punctatus) have focused on limited nu

140 However, catfish (Ictalurus punctatus) is the only species of fis

141 Catfish (Ictalurus punctatus) retinal cone horizontal ce

142 partial membrane fraction (P2) derived from catfish (Ictalurus punctatus) taste epithelium, was foun

143 The alpha-actin gene of channel catfish (Ictalurus punctatus) was cloned and sequenced.

144 ved from external taste epithelia of channel catfish (Ictalurus punctatus) were incorporated into lip

145 ultiple CK isoenzymes in the diploid channel catfish (Ictalurus punctatus) with one unusual cathodic

146 S RP complementary DNAs (cDNAs) from channel catfish (Ictalurus punctatus), making them one of the mo

147 47 60S ribosomal protein cDNAs from channel catfish (Ictalurus punctatus), of which 43 included the

148 quality reference genome sequence of channel catfish (Ictalurus punctatus), the major aquaculture spe

149 ne protective in zebrafish (Danio rerio) and catfish (Ictalurus punctatus), triggering systemic immun

150 rtebrate, has been identified in the channel catfish (Ictalurus punctatus).

151 library made from the brain mRNA of channel catfish (Ictalurus punctatus).

152 tein (gfp) as a reporter in cells of channel catfish (Ictalurus punctatus).

153 ly that causes enteric septicemia in channel catfish (Ictalurus punctatus).

154 ess database for genome biology of ictalurid catfish (Ictalurus spp.).

155 e describe, from a teleost fish (the channel catfish, Ictalurus punctatus), a novel complex chimeric

156 s were dissociated from the gills of channel catfish, Ictalurus punctatus, and cultured.

157 ncer (Emu3') of the IgH locus of the channel catfish, Ictalurus punctatus, differs from enhancers of

158 Channel catfish, Ictalurus punctatus, leukocyte immune type rece

159 utilized to successfully target the channel catfish, Ictalurus punctatus, muscle suppressor gene MST

160 er (E(mu)3') of the IgH locus of the channel catfish, Ictalurus punctatus, shows strong B cell-specif

161 eriments were carried out with naive channel catfish, Ictalurus punctatus, using immobilizing murine

162 In recent studies in channel catfish, Ictalurus punctatus, we identified 26 distinct

163 d amino acids were identified in the channel catfish, Ictalurus punctatus.

164 al nerves, in fixed specimens of the channel catfish, Ictalurus punctatus.

165 n response to certain pathogens and that the catfish IgD Fc-region, as has been suggested for human I

166 The delta-chain of catfish IgD was initially characterized as a unique chim

167 ed transcription from the core region of the catfish IgH enhancer (Emu3') in a manner dependent on th

168 )/IgD(+) B cells can express any of the four catfish IgL isotypes.

169 Recombinant IpFcRI binds catfish IgM as assessed by both coimmunoprecipation and

170 Although catfish IgM has been extensively studied at the function

171 Catfish IgM(+)/IgD(+) B cells are small and agranular.

172 Together, these findings imply that catfish IgM(-)/IgD(+) B cells likely expand in response

173 evident differences in rabbit ileal loop and catfish ileal loop responses to E. ictaluri and S. Typhi

174 will allow for more effective monitoring of catfish immune responses to pathogens.

175 We studied 11 groups of four catfish in a laboratory arena and recorded air-breathing

176 These findings imply that in catfish, individual taste cells preferentially express r

177 rtalities and economic losses to the channel catfish industry of the southeast United States.

178 mponent of an immersion-oral vaccine for the catfish industry.

179 te and tactile fibers in the facial nerve of catfish innervate extraoral taste buds and terminate som

180 . ictaluri O-PS LPS mutants by using a novel catfish intestinal loop model and compare it to the rabb

181 cillus strains isolated from soil or channel catfish intestine were screened for their antagonism aga

182 To introduce desirable genes from blue catfish into channel catfish through introgression, a ge

183 Taste bud formation in channel catfish is first seen to occur in stage 39 embryos, when

184 The lateral line system of the channel catfish is formed by mechanoreceptive neuromasts located

185 Catfish is the major aquaculture species in the United S

186 Catfish is the major aquaculture species in the United S

187 Zebrafish and catfish ISG15 genes were subsequently identified by sequ

188 ely related species or a sequenced genome in catfish, it was difficult to make inferences as to the o

189 All 29 catfish JB gene segments appear functional.

190 Earlier studies distinguished two classes of catfish light (L) chain (designated F and G).

191 nuclei of the secondary gustatory nucleus of catfish, like those of the parabrachial nucleus of birds

192 specific search functions, visualization of catfish linkage, physical and integrated maps, a catfish

193 es under positive selection in high-altitude catfishes, located at opposite ends of the RH1 intramole

194 nes encode the multiple forms of the channel catfish M-CK cDNAs.

195 rophages, a cDNA library from LPS-stimulated catfish macrophages was screened by subtractive hybridiz

196 differentially expressed genes from channel catfish macrophages, a cDNA library from LPS-stimulated

197 y crossing channel catfish females with blue catfish males exhibit a number of desirable production t

198 tions and other methods to establish goliath catfish migratory routes, their seasonal timing and poss

199 Broadhead catfish mince had 2-MIB at level of 0.8mug/kg, but no 2-

200 ns conferred significant benefit in reducing catfish mortality (P<0.05).

201 r contents of myofibrillar proteins than had catfish muscle (p<0.05).

202 Lipids from striped catfish muscle were extracted with the aid of crude prot

203 mutations, was not a significant target for catfish mutations.

204 ebrafish 17-mer peptide corresponding to the catfish NCCRP-1 antigen-binding domain inhibited (catfis

205 characterizes a zebrafish orthologue of the catfish NCCRP-1.

206 The catfish nonspecific cytotoxic cell receptor protein (NCC

207 Catfish Oct2 a and beta are tissue restricted, bind both

208 Catfish Oct2 alpha and beta isoforms are derived by alte

209 Catfish Oct2 beta is a more potent transcriptional activ

210 In transient expression assays, catfish Oct2 beta showed a marked preference for the oct

211 t analysis competition assays indicated that catfish Oct2 binds the consensus octamer motif with an a

212 To test this hypothesis, two catfish Oct2 cDNAs (alpha and beta) were cloned by scree

213 In comparisons with mammalian Oct2, the catfish Oct2 isoforms show high sequence conservation in

214 While catfish Oct2 was shown to be capable of binding PORE and

215 Catfish Oct2, when bound in this monomeric conformation,

216 ance chimeric retinal channel containing the catfish olfactory channel P region (RO133).

217 s weakly activated by N(1)-oxide cAMP, and a catfish olfactory-like bovine rod mutant lost activation

218 p-cGMPS, which activates bovine rod, but not catfish, olfactory channels.

219 Catfish oocyte TFIIIA was identified by its association

220 loning of partial cDNAs encoding the channel catfish orthologues of rhodopsin and the red cone pigmen

221 greater content of sodium chloride than had catfish (p<0.05).

222 cDNA clones encoding portions of a putative catfish parathyroid hormone (PTH) 2 receptor (PTH2R) led

223 hould greatly enhance genome research in the catfish, particularly aiding in the identification of ge

224 Catfish, particularly ordinary muscle, was composed of h

225 induces in vitro proliferative responses of catfish PBL that were synergistically enhanced by the ad

226 e native IpFcRI glycoprotein was detected in catfish plasma using a polyclonal Ab.

227 We report that the Japanese sea catfish Plotosus japonicus senses local pH-associated in

228 The hybrid catfish produced by crossing channel catfish females wit

229 r and sediment samples from a high-intensity catfish production system and its original water reservo

230 and sulfadiazine (SDZ) in imported Pangasius catfish products in Thailand.

231 Therefore, antibiotic residues in Pangasius catfish products should be continually regulated and mon

232 f the secondary gustatory nucleus of channel catfish project to different diencephalic targets, singl

233 enome sequences and transcriptomes of scaled catfishes, provide crucial resources for evolutionary an

234 e populations of a North American freshwater catfish, Pylodictis olivaris, and the important role of

235 The channel catfish reference genome sequence, along with two additi

236 Catfish represent 12% of teleost or 6.3% of all vertebra

237 A total of 330 individuals of flathead catfish, representing 34 drainages throughout the specie

238 ata integration and dissemination within the catfish research community and to interested stakeholder

239 We determined that catfish respond to E. ictaluri LPS but not to S. Typhimu

240 ferent distribution of InsP3 receptor in the catfish retina compared to that of other vertebrates, th

241 as expressed in the horizontal-cell layer of catfish retina.

242 nd immunohistochemical (IHC) analyses of the catfish retina.

243 Muller glial cells and neurons of the distal catfish retina.

244 nuclear layer and limiting membranes of the catfish retina.

245 nt T cell lines established from the channel catfish revealed distinctly different TCR beta rearrange

246 hat an IGHD3-encoded protein is expressed in catfish serum.

247 atty acid composition of the roe of European catfish (Silurus glanis) wild specimens captured in the

248 ing material was naturally contaminated Wels catfish (Silurus glanis), caught in the Ebro River (Spai

249 Channel catfish skin collagens were typical type I collagens and

250 Channel catfish skin is a by-product from catfish fillet product

251 Collagens were extracted from catfish skins by: (1) acid; (2) homogenization-aided; an

252 t the main spawning regions of these goliath catfish species are in the western Amazon; (ii) at least

253 hodic CK isoform existed only in the channel catfish stomach, ovary, and spleen, but not in any other

254 the Japanese medaka (Oryzias latipes) and a catfish (Synodontis multipunctatus) suggests that expres

255 of rhodopsin function in an Andean mountain catfish system spanning a range of elevations.

256 analyses showed that CF-TRX is expressed in catfish T and macrophage cell lines, but weakly in B cel

257 by the addition of culture supernatants from catfish T cell lines.

258 inine binding sites on the apical surface of catfish taste buds.

259 ange necessary to elicit neural responses in catfish taste fibers.

260 h that in mammals, genomic sequencing of the catfish TCR DB-JB-CB region reveals a unique locus conta

261 he first transcriptome-level analysis of the catfish testis.

262 Two alternatively spliced forms of catfish TF12 (termed CFEB1 and -2) were identified and c

263 The N-terminal region of catfish TFIIIA contains the oocyte-specific initiating M

264 Catfish TFIIIA lacks the conserved transcription activat

265 Catfish TFIIIA was able to bind the catfish and Xenopus

266 and L29 are significantly shorter in channel catfish than in mammals due to deletions in the 3' end o

267 Channel catfish that were vaccinated with a single immersion dos

268 rly gene-based brain-imaging method (Arc/H1a catFISH) that allows comparisons of neuronal ensembles a

269 the most striking physical characteristic of catfish, the evolutionary loss of scales and provide evi

270 In catfish, the facial nerve innervates taste buds distribu

271 s screening yielded a 552-bp cDNA coding for catfish thioredoxin (CF-TRX).

272 sirable genes from blue catfish into channel catfish through introgression, a genetic linkage map is

273 le approach to determine 19 PCB congeners in catfish tissue was presented.

274 compounds, geosmin and methylisoborneol, in catfish tissue.

275 As part of our transcriptome analysis in catfish to develop molecular reagents for comparative fu

276 s indicating that taste responses of channel catfish to L-Arg are mediated by high-affinity receptors

277 ption by fluorescence in situ hybridization (catFISH) to locate populations of neurons in the mammali

278 8.0%, 5.3%, 5.1%, 2.6% and 8.0% for tilapia, catfish, trout, salmon, hybrid striped bass and yellow p

279 quence was delivered by lipofection to three catfish types: fibroblast and leukocyte cell lines, and

280 differential temporal regulation of channel catfish virus (CCV) genes, the transcriptional kinetics

281 alHV-1 shares at least 18 genes with channel catfish virus (CCV), a fish herpesvirus whose complete s

282 ogenetic catfish were immunized with channel catfish virus (CCV)-infected MHC-matched clonal T cells

283 ipts from the terminal repeat of the channel catfish virus (CCV; also known as ictalurid herpesvirus

284 equine herpesvirus 1 (EHV-1), and of channel catfish virus, an evolutionarily remote herpesvirus.

285 ponyfish muscle hydrolysis were 3.5% hybrid catfish viscera extract, 15 min reaction time and fish m

286 the 21 Bacillus strains in the intestine of catfish was determined as Bacillus CFU/g of intestinal t

287 e peptidase from the viscera of farmed giant catfish was used for producing gelatin hydrolysates (HG)

288 When viscera extract from hybrid catfish was used for the production of protein hydrolysa

289 derived from lymphocytes of juvenile channel catfish, was used to construct lambda libraries that wer

290 art of our transcriptome analysis of channel catfish, we have analyzed 1909 expressed sequence tags (

291 entral muscles of Nile tilapia and broadhead catfish were comparatively studied.

292 Homozygous gynogenetic catfish were immunized with channel catfish virus (CCV)-

293 hia coli, mammalian COS-7 cells, and channel catfish where it elicited antigen-specific immune respon