ライフサイエンスコーパス: chloroplast genome

1 cated in the large single-copy region of the chloroplast genome.

2 herefore, we expressed the phaA gene via the chloroplast genome.

3 roplasts by inserting the pagA gene into the chloroplast genome.

4 symmetrically transcribed and densely packed chloroplast genome.

5 her vascular plant examined across an entire chloroplast genome.

6 been obtained through transformation of the chloroplast genome.

7 to the codon bias seen in the C. reinhardtii chloroplast genome.

8 stable integration of the CTB gene into the chloroplast genome.

9 e principal mechanism of evolution for their chloroplast genome.

10 her than substitution rates elsewhere in the chloroplast genome.

11 with a "lineage effect" acting on the entire chloroplast genome.

12 r which a complementary tRNA is coded by the chloroplast genome.

13 ay of artemisinic acid biosynthesis into the chloroplast genome.

14 rom Trichoderma reesei and expressed via the chloroplast genome.

15 genetic diversity in any or all regions of a chloroplast genome.

16 e copy region and the inverted repeat of the chloroplast genome.

17 tion, splicing other group II introns in the chloroplast genome.

18 components of the chloroplast, including the chloroplast genome.

19 proclivity for taking up sequences from the chloroplast genome.

20 ating its expression from the nucleus to the chloroplast genome.

21 cleavage site, was expressed via the tobacco chloroplast genome.

22 ces, and by comparing gene arrangements from chloroplast genomes.

23 pa23, which maintained unusual heteroplasmic chloroplast genomes.

24 been reported for at least three land plant chloroplast genomes.

25 t have led to the evolutionary divergence of chloroplast genomes.

26 e potential biotechnological applications of chloroplast genomes.

27 r highly unusual organization of nuclear and chloroplast genomes.

28 and develop a new method GRAPPA-IR to handle chloroplast genomes.

29 ve to the ancestral gene order of angiosperm chloroplast genomes.

30 table integration of cry2Aa2 into all of the chloroplast genomes (5, 000-10,000 copies per cell) of t

31 ntegration of the EPSPS gene into all of the chloroplast genomes (5000-10,000 copies per cell) of tra

32 lete nuclear ribosomal cistron, the complete chloroplast genome, a partial mitochondrial genome, and

33 engineering by stable transformation of the chloroplast genome, a technology not afflicted with epig

34 genomic analyses, using both the nuclear and chloroplast genomes, allowed us to detect a speciation e

35 his is the first report of transcriptome and chloroplast genome analysis of any Anacardiaceae family

36 ots confirmed integration of MSI-99 into the chloroplast genome and achievement of homoplasmy, wherea

37 Therefore, we sequenced the soybean chloroplast genome and compared it to the other complete

38 Stable transgene integration into the chloroplast genome and homoplasmy were confirmed by Sout

39 ene cluster of the Chlamydomonas reinhardtii chloroplast genome and to assess the role of the photosy

40 localization of the genes in the nuclear and chloroplast genomes and a complex assembly process resul

41 cific transgene integration into the tobacco chloroplast genomes and homoplasmy.

42 about 30 subunits from both the nuclear and chloroplast genomes and is ubiquitous across most land p

43 the time required for analysis of assembled chloroplast genomes and removes the need for pipelines a

44 coordinate the expression of the nuclear and chloroplast genomes and the expression of genes with the

45 d DNA segments such as the mitochondrial and chloroplast genomes and the nonrecombining portion of th

46 Integration of appropriate transgenes into chloroplast genomes and the resulting high levels of fun

47 plement of Chlamydomonas with those of other chloroplast genomes and to scan the genomes for sequence

48 The cls8-1 mutant has fewer copies of the chloroplast genome, and fewer, larger chloroplasts than

49 nature of essential proteins encoded by the chloroplast genome, and underscores the value of using n

50 arate DNA locations, such as the nuclear and chloroplast genome, and using the split intein to genera

51 new sequences are compared with the tobacco chloroplast genome, and, where data are available, with

52 nces in comparison to eight other angiosperm chloroplast genomes, and these are concentrated near rea

53 92.3% of the genome, including the complete chloroplast genome (approximately 153 kb) and a nearly c

54 f this method has provided new insights into chloroplast genome architecture, gene content and evolut

55 s of occasional paternal transmission of the chloroplast genome are discussed in the framework of usi

56 the expression of bacterial operons via the chloroplast genome are recent landmark achievements in m

57 number of known DNA regulatory sequences in chloroplast genomes are limited.

58 Chloroplast genomes are now produced in the hundreds for

59 Chloroplast genomes are organized as a polyploid DNA-pro

60 Virtually all plastid (chloroplast) genomes are circular double-stranded DNA mo

61 atures has not been uniformly applied to all chloroplast genomes available in the sequence databases.

62 Medicago confirm the organization of legume chloroplast genomes based on previous studies.

63 poration was compared at 11 sites within the chloroplast genome between vegetative cells, gametes, an

64 s have been highly expressed via the tobacco chloroplast genome but extending this concept to importa

65 s that requires the interplay of nuclear and chloroplast genomes, but key steps in this developmental

66 ed to Ic (Ic-EPSPSc) was integrated into the chloroplast genome by homologous recombination.

67 ers from the usual gene order for angiosperm chloroplast genomes by the presence of a single, large i

68 for the complete nuclear, mitochondrial, and chloroplast genomes by tiling 5 million 36-mer probes.

69 oenzyme A carboxylase encoded in part by the chloroplast genome can function instead.

70 incompatible species, we show that complete chloroplast genomes can travel across the graft junction

71 We observed that the chloroplast genome contains many more promoters than gen

72 These results indicate that chloroplast genome copy number is a limiting factor for

73 These results highlight the potential for chloroplast genome copy number regulation through altern

74 The small, compact and intronless chloroplast genome (cpDNA) of V. peltata shows striking

75 The lycophyte chloroplast genome data also enable a better reconstruct

76 The Chloroplast Genome Database (ChloroplastDB) is an intera

77 Chloroplast genomes encode approximately 37 proteins tha

78 ale and Dendrobium catenatum, most of the 11 chloroplast genome-encoded ndh genes (cp-ndh) have been

79 In this work, we have characterized the chloroplast genome-encoded ycf4 (for hypothetical chloro

80 Chloroplast genome engineering was applied to express se

81 tilizing valuable information from sequenced chloroplast genomes enhanced expression of eukaryotic hu

82 introduction of any desired change into the chloroplast genome, even in the absence of phenotypic se

83 rB genes to modify plants via the nuclear or chloroplast genome, expressing organomercurial lyase and

84 CLC Genomics Workbench to assemble complete chloroplast genomes for all nine species.

85 rizontal transfer into the E.myxocylindracea chloroplast genome from a cyanobacterial donor and shoul

86 It is shown that the two strands of the chloroplast genome from Euglena gracilis are asymmetric

87 trate a system for cloning and modifying the chloroplast genome from the green alga, Chlamydomonas re

88 The availability of over 800 sequenced chloroplast genomes from a variety of land plants has en

89 A test of GRAPPA-IR using divergent chloroplast genomes from land plants and green algae rec

90 still tentative pending the large number of chloroplast genomes from other key lineages that are soo

91 The psbA gene of the chloroplast genome has a codon usage that is unusual for

92 chloroplast genes and the tRNAs coded by the chloroplast genome, however, is not observed in all syno

93 rcurial lyase (merB), respectively, into the chloroplast genome in a single transformation event.

94 Chloroplast genomes in land plants harbor approximately

95 Chloroplast genomes in plants and green algae contain nu

96 ranscriptionally active spacer region of the chloroplast genome, in a nuclear RbcS antisense line and

97 s being degraded by the mutation bias of the chloroplast genome, in other words, that the psbA gene i

98 n codon usage in each of the fully sequenced chloroplast genomes, in addition to Chlamydomonas reinha

99 H. akashiwo, not previously reported in any chloroplast genome, include tyrC, a tyrosine recombinase

100 e next few years, as the number of sequenced chloroplast genomes increases rapidly, the tools availab

101 g crop plants for disease resistance via the chloroplast genome instead of the nuclear genome is desi

102 species from the same family, the tung tree chloroplast genome is distinct with 85 single nucleotide

103 pattern of molecular evolution of the plant chloroplast genome is extremely complex as a result of a

104 ous engineering of multiple sites within the chloroplast genome is now possible.

105 xpressed via the tobacco (Nicotiana tabacum) chloroplast genome is reported here.

106 y conserved in bacterial, mitochondrial, and chloroplast genomes, its exact biological function remai

107 eristic rearrangements in both copies of the chloroplast genome large inverted repeat.

108 ulations from each region, using nuclear and chloroplast genome markers, and combined population gene

109 nd plants, and analyses of the multigene and chloroplast genome matrices provided moderate to strong

110 The origin of this highly deviant chloroplast genome most likely occurred before the emerg

111 nal forms of cytochromes f and c6 owing to a chloroplast genome mutation that prevents heme attachmen

112 of techniques to sequence the first complete chloroplast genome of a lycophyte, Huperzia lucidula.

113 e mutant psaB genes were introduced into the chloroplast genome of Chlamydomonas reinhardtii.

114 Here we report on the highly deviant chloroplast genome of Cladophorales green algae, which i

115 survey of restriction site variation in the chloroplast genome of Coreopsis grandiflora.

116 group II intron from a cyanobacteria to the chloroplast genome of Euglena myxocylindracea.

117 The chloroplast genome of Glycine is 152,218 basepairs (bp)

118 Compared to the chloroplast genome of Jatropha curcas, a species from th

119 The chloroplast genome of land plants contains only a single

120 er in a number of noncoding regions from the chloroplast genome of members of the grass family (Poace

121 This lack of biological variation in the chloroplast genome of P. torreyana allowed us to estimat

122 hether there is any variation present in the chloroplast genome of Pinus torreyana (Parry ex Carriere

123 nd a selection of gene-encoding tRNAs in the chloroplast genome of the fern Adiantum capillus-veneris

124 We sequenced the chloroplast genome of Trachelium caeruleum L.

125 The chloroplast genome of V. litorea was found to be 119.1 k

126 We report the assembly of the nuclear and chloroplast genomes of D. oligosanthes, from high-throug

127 anelle genome of Cyanophora paradoxa; in the chloroplast genomes of diatoms, dinoflagellates, and red

128 procedures are applied to 33 genes from the chloroplast genomes of rice, tobacco, pine, and liverwor

129 Of the 12 pre-mRNA introns in the maize chloroplast genome, only one is normally spliced in both

130 with a plasmid that lacked homology with the chloroplast genome or with the same plasmid carrying a p

131 Chloroplast genome organization, gene order, and content

132 The multiple copies of the chloroplast genome (plastome) are condensed and organize

133 noid molecular evolution was investigated by chloroplast genome (plastome) scale analyses.

134 For example, the Huperzia chloroplast genome possesses the bryophyte gene order fo

135 nd that RNA editing may play a major role in chloroplast genome processing.

136 Integration of CPL into the chloroplast genome provides a dramatic demonstration of

137 availability of polymorphic SSR loci in the chloroplast genome provides new opportunities to investi

138 SNPs for any two Echinacea chloroplast genomes ranged from 181 to 910, and provided

139 A genes has been suggested as a mechanism of chloroplast genome rearrangements.

140 ble integration of the merAB operon into the chloroplast genome resulted in high levels of tolerance

141 using specific primers for a locus from the chloroplast genome, ribulose diphosphate carboxylase.

142 enetic markers, (d) generation of a complete chloroplast genome sequence and analyses of chloroplast

143 a genomic structural character matrix, and a chloroplast genome sequence matrix, using maximum likeli

144 We surveyed the chloroplast genome sequence of clade-member Adiantum cap

145 geted metagenomics has provided the complete chloroplast genome sequence, and the distribution, for a

146 to 8x depth coverage to obtain the complete chloroplast genome sequence.

147 enomes share little synteny with other algal chloroplast genomes sequenced to date.

148 Surprisingly, chloroplast genome sequences are available only for diat

149 d species identification assays derived from chloroplast genome sequences are discussed in light of p

150 Lack of complete chloroplast genome sequences is still one of the major l

151 In this review, we discuss the impact of chloroplast genome sequences on understanding the origin

152 e, from an alignment of three complete grass chloroplast genome sequences.

153 A universal challenge to chloroplast genome sequencing studies is the retrieval o

154 The H. akashiwo chloroplast genomes share little synteny with other alga

155 The Trachelium chloroplast genome shares with Pelargonium and Jasminum

156 Successful transformation of the chloroplast genome should address concerns about transge

157 monas and tobacco, the transformation of the chloroplast genome still represents a challenging techno

158 hlamydomonas strain spa19 bears two distinct chloroplast genomes, termed PS+ and PS-.

159 A chloroplast genome that is composed only of linear DNA m

160 e found to contain related inversions of the chloroplast genome that resulted from recombination betw

161 In the plant chloroplast genome the codon usage of the highly express

162 erved duplicated regions are present in many chloroplast genomes, the inference of inverted repeats i

163 d the availability of at least 200 sequenced chloroplast genomes, the number of known DNA regulatory

164 h the tufA sequence, and introduced into the chloroplast genome; the 3' UTR was also substituted for

165 y integrated and expressed using the tobacco chloroplast genome to confer desired agronomic traits or

166 analog of magainin 2, was expressed via the chloroplast genome to obtain high levels of expression i

167 demonstrate the ability of the Chlamydomonas chloroplast genome to undergo a large inversion without

168 Here, we present the use of full chloroplast genomes to distinguish between all 9 reporte

169 a His-Asp phosphorelay mechanism may affect chloroplast genome transcription in a manner similar to

170 egrated into the tobacco (Nicotiana tabacum) chloroplast genome under the control of the light-regula

171 few, if any, of the group II introns in the chloroplast genome undergo autocatalytic splicing in viv

172 on of an unmodified CTB-coding sequence into chloroplast genomes (up to 10,000 copies per cell), resu

173 e characterized mango leaf transcriptome and chloroplast genome using next generation DNA sequencing.

174 n of the petunia EPSPS gene into the tobacco chloroplast genome using the tobacco or universal vector

175 yses, including data from cyanobacterial and chloroplast genomes using a Bayesian approach, with the

176 developed a simplified method for sequencing chloroplast genomes, using fosmids selected from a total

177 rscore the need for sequencing complete crop chloroplast genomes, utilization of endogenous regulator

178 irmed transgene integration into the lettuce chloroplast genome via homologous recombination at the t

179 ccurring in noncoding sequences of the plant chloroplast genome violate the independence of sites tha

180 sources, including the cucumber nuclear and chloroplast genomes, viruses, and bacteria.

181 merAB operon was stably integrated into the chloroplast genome was confirmed by polymerase chain rea

182 homologous region present in the black pine chloroplast genome was incorporated, virtually no editin

183 When the sequence of the Euglena gracilis chloroplast genome was reported in 1993 the alpha-subuni

184 The chloroplast genome was sequenced with 161,528 bp in leng

185 Using stable transformation of the chloroplast genome, we have generated ycf4 knockout plan

186 ss to the historical record contained within chloroplast genomes, we have adapted multiplex sequencin

187 Transgenes stably integrated into the cotton chloroplast genome were maternally inherited and were no

188 ar DNA fibers with one to four copies of the chloroplast genome were present, with monomers being the

189 The chloroplast genomes were fairly conserved, but the mitoc

190 Twenty-five chloroplast genomes were sequenced, and 1127 plant acces

191 Genetic relationships between chloroplast genomes were studied to trace the evolutiona

192 psaA, and may be rescued by transforming the chloroplast genome with an intron-less version of psaA.

193 al transformation, and transformation of the chloroplast genome with synthetic operon constructs.

194 gs, AP003280, includes almost 57 kb (45%) of chloroplast genome with the intact copies of 22 KPC gene

195 These organisms have a highly unusual chloroplast genome, with genes located on multiple small

196 BTD, Verdant provides accurate annotation of chloroplast genomes without manual intervention.