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1 4 of 51 of these proteins were substantially cleaved.
2 minal extension of SPI-1 was proteolytically cleaved.
3 the silica while the cytoplasmic region was cleaved.
4 ically similar peptides that do not bind are cleaved.
5 cific locus engineered into chromosome-1 and cleaved.
6 unintended off-targets might additionally be cleaved.
7 elles in which acid hydrolase substrates are cleaved.
8 stalled replication forks must therefore be cleaved.
9 ence that this domain is posttranslationally cleaved.
10 rt a pronounced ordering of hydroxyls on the cleaved (001) surface of Ca3Ru2O7 perovskite induced by
11 rt a pronounced ordering of hydroxyls on the cleaved (001) surface of the Ruddlesden-Popper perovskit
12 re-mRNA is recognized by the PB2 subunit and cleaved 10-13 nucleotides downstream of the cap by the e
14 tures of the spliceosomal C complex with the cleaved 5' exon and lariat-3'-exon bound to the catalyti
16 was associated with decreased expression of cleaved (activated) caspases 9 and 3, suggesting that Uc
17 /R1018Q/R1545Q, FV(DeltaIIa)) that cannot be cleaved/activated by thrombin or FXa also enhanced TFPI-
22 vels of beta-secretase 1 (BACE-1) and BACE-1-cleaved amyloid precursor protein (APP) metabolites (sec
23 e similar in that trimethyllead (TML) is not cleaved and binds only to D99, whereas diethyllead (DEL)
27 induced expression of pre-mRNAs prematurely cleaved and polyadenylated from cryptic polyadenylation
28 These previously undescribed prematurely cleaved and polyadenylated pre-mRNAs, some of which cont
29 qualitative changes (chlorogenic acids were cleaved and significant amounts of caffeic acid and feru
31 be used to robustly rank and classify known cleaved and uncleaved peptides and that these structural
32 material was homogeneous (>95% pure), fully cleaved, and of the appropriate molecular weight and siz
33 G1/2 causes aberrant insertions by releasing cleaved antibody gene fragments that subsequently reinte
34 nal extension, or lacking the extension (pre-cleaved), are unable to complement an L27 deletion in St
38 s intact and in complex with Drs2p, which is cleaved at two positions, namely after Arg(104) and afte
40 n reaction suggests that the N-H bond is not cleaved but serves to stabilize the turnover-determining
42 When the PYBs bind, the thiazolium ring is cleaved, but when the SCTs bind, ThDP is modified to thi
47 to be inactive against the insect but can be cleaved by a spruce beta-glucosidase, PgbetaGLU-1, which
48 Seizure protein 6 (SEZ6) is predominantly cleaved by BACE1, and Sez6 knockout mice share some phen
49 (AD), the amyloid precursor protein (APP) is cleaved by beta-secretase to generate a 99-aa C-terminal
51 cleaved by the cocoa enzyme, (II) sequences cleaved by both pepsin and the cocoa enzyme, and (III) t
52 Here we provide evidence that VE-cadherin is cleaved by calpain upon entry into clathrin-enriched dom
58 essing enzymes add to the number of epitopes cleaved by cathepsins, altogether generating a wider pep
61 t interfering Ribonucleic Neutrals (siRNNs), cleaved by cytoplasmic enzymes into short interfering Ri
62 Interestingly, the peptide substrate was not cleaved by endogenous pancreatic protease such as trypsi
63 es such as benenodin-1 can be recognized and cleaved by enzymes called lasso peptide isopeptidases.
64 ap by strand displacement synthesis that was cleaved by Fen1, and DNA ligase sealed the nick for comp
66 n addition, the adam13 cytoplasmic domain is cleaved by gamma secretase, translocates into the nucleu
68 99-aa C-terminal fragment (C99) that is then cleaved by gamma-secretase to generate the beta-amyloid
69 forward transport to the Golgi, where it is cleaved by Golgi-resident proteases, releasing the N-ter
72 Primary microRNA transcripts (pri-miRs) are cleaved by Microprocessor, a complex containing the RNas
73 the matrix compartment, Prx1 is sequentially cleaved by mitochondrial processing peptidase and then b
74 report, we identified the repertoire of RNAs cleaved by Mycobacterium tuberculosis toxin MazF-mt9 usi
76 They are made as proprotein dimers and then cleaved by proprotein convertases to release the C-termi
77 ying peptide substrates that are efficiently cleaved by proteases gives insights into substrate recog
78 ge of novel substrates that are specifically cleaved by RHBDL2, including the interleukin-6 receptor
81 transmembrane peptide substrates, which are cleaved by several unrelated rhomboid proteases, can be
83 Brother (BB) and DA2, which are subsequently cleaved by the activated peptidase and destabilized.
84 and characterized: (I) sequences exclusively cleaved by the cocoa enzyme, (II) sequences cleaved by b
88 processing.Upon autophagy induction, LC3 is cleaved by the protease ATG4 and conjugated to the autop
89 w report that cytoplasmic DPPA3 is partially cleaved by the ubiquitin-proteasome system and an N-term
90 the thrombin-resistant R221A mutant is still cleaved by these PCs, revealing that convertase cleavage
92 ates are loaded into PIWI-clade proteins and cleaved by Zucchini/MitoPLD, yielding precursor piRNAs (
93 , PCY1 uses an unusual strategy in which the cleaved C-terminal follower peptide from the substrate s
96 s demonstrated by the use of reactive-center-cleaved C1INH, but dependent on its glycosylation status
97 wed widespread immunoreactivity for ZIKV and cleaved caspase 3 (CC3, a marker of apoptosis) throughou
102 n 1 (MCP-1), TNF-alpha, and IL-6 and hepatic cleaved caspase 3 in mice fed either a normal chow diet
103 4, cleaved Poly ADP-Ribosyl Polymerase 1 and cleaved Caspase 3 levels with a parallel decrease in ant
104 The effects of mTOR activation on hepatic cleaved caspase 3 were reversed by rapamycin, an inhibit
106 tress markers (BiP, pIRE1alpha, sXBP1, CHOP, cleaved caspase-12) were increased in septic WT mice, bu
107 unting and autoradiography and compared with cleaved caspase-3 (CC3) activation and DNA fragmentation
110 ity in the tumors positively correlated with cleaved caspase-3 (r = 0.85, P < 0.001) and TUNEL (r = 0
111 ERK, together with a decreased expression of cleaved caspase-3 in mice treated with 6-OHDA or rotenon
112 r than pyroptosis, as indicated by increased cleaved caspase-3 levels and the absence of caspase-1.
114 , quantified by TUNEL positive myonuclei and cleaved caspase-3 positive myonuclei, was also elevated
115 disturbed distribution of cytochrome c, and cleaved caspase-3 positive staining indicated that incre
116 staining; p < 0.03) and apoptosis induction (cleaved Caspase-3 staining; p < 0.001) when compared to
119 /-) mice had the lowest renal levels of Bax, cleaved caspase-3, and NADPH oxidase-4 expression and re
120 xpressions of Fas, Fas-L, Bax/Bcl-2, cyto-c, cleaved caspase-3, and PARP in a dose-dependent manner,
121 was validated ex vivo using gamma-counting, cleaved caspase-3, and terminal deoxynucleotidyl transfe
122 miR-K9 also decreased the protein levels of cleaved caspase-3, cleaved caspase-7, and cleaved poly(A
124 tern blot were used to validate apoptosis by cleaved caspase-3, proliferation by Ki67, and pathway in
125 histologic markers of cell death, including cleaved caspase-3, whereas there was no such correlation
126 sed the protein levels of cleaved caspase-3, cleaved caspase-7, and cleaved poly(ADP-ribose) polymera
128 a acetylated MnSOD(K68) Murine AEC SIRT3 and cleaved caspase-9 (CC-9) expression were assayed by immu
130 mmation (CD68) decreased and apoptosis (anti-cleaved-caspase 3 antibody) increased in aortic sinus sl
131 tasis was associated with activation of Bax, cleaved caspases-3 and -9, and down-regulation of Bcl-2,
132 experiments indicated that the C-terminally cleaved CaValpha2delta1 proteins up-regulate CaV1.2 chan
134 blocking fragment (extracellular portion of cleaved CDCP1) lead to increased LD abundance in primary
137 stabilize a naturally occurring efficiently cleaved clade C Env, namely 4-2.J41, isolated from an In
138 ebrand factor type A (VWA) domain within the cleaved CLCA1 N-terminal fragment is necessary and suffi
142 the synchrotron structure, the Fe-CO bond is cleaved; CO relocates to a new site near CuB, which, in
145 ence of cholesterol, trypsin or proteinase K cleaved cytosolic loop 4, generating a protected fragmen
150 have shown that mature cytoplasmic tRNAs are cleaved during stress response to produce tRNA fragments
151 This bifunctional marker was efficiently cleaved during virus maturation, producing free mCherry
152 s epithelia to mucosal secretions, where the cleaved ectodomain (secretory component; SC) becomes a c
158 rexpressed in ovarian cancer tumors, and its cleaved extracellular domain can be detected in the seru
159 xhibited restricted specificity for protease-cleaved F(ab')2 fragments and did not bind the intact Ig
160 and testable on a wafer scale, requiring no cleaved facets or special mirror coating to function.
163 , Singh et al. (1) showed that the truncated cleaved form of neurotransmitter neuropeptide Y (NPY) ac
164 e previously discovered that an N-terminally-cleaved form of RXRalpha (tRXRalpha), produced in tumour
165 n, intact Dkk4 inhibits MG extension but the cleaved form progressively increases during MG developme
166 +)/Cl(-) cotransporter (NCC), claudin-7, and cleaved forms of epithelial Na(+) channel (ENaC) alpha a
167 in D), the pore-forming effector protein, is cleaved, forms oligomers, and inserts into the membranes
169 The short CLE peptide (12-13 amino acids) is cleaved from a larger pre-propeptide and functions as an
174 heir chromophore, phycocyanobilin (PCB), was cleaved from the apoprotein by solvolysis in alcohols an
175 hat the C-terminal kinase domain of TRPM6 is cleaved from the channel domain in a cell type-specific
176 gion and a DNA binding domain (DBD), is auto-cleaved from the ER membrane, and then enters the nucleu
177 ith a tight bicyclic core that appears to be cleaved from the middle of a larger 30-residue precursor
180 regions (ECRs) that are autoproteolytically cleaved from their membrane-embedded signaling domains.
182 ve phosphorylation, was post-translationally cleaved generating differential amounts of long and shor
183 of a small group of genes and that most H3NT-cleaved genes displayed significant expression changes d
185 assessed by measurement of plasma levels of cleaved high-molecular-weight kininogen, and efficacy wa
186 nd yeast surface display to produce properly cleaved HIV-1 Env variants that lack all 15 core gp120 g
187 ssed a single-surface endo-acting lyase that cleaved HS, reflecting its higher molecular weight compa
189 tory AHA reactivity in RA was against pepsin-cleaved IgG4, with a 35% prevalence, >/=5.8-fold higher
192 strate that exogenously administered CgA was cleaved in favor of the proangiogenic form and was assoc
193 anabolic pathway (re-)builds carbon bonds as cleaved in glycolysis in an aldol condensation of the un
194 receptor binding at synapses the receptor is cleaved in its transmembrane domain and releases a prote
199 ocalize to the ER membrane and that they are cleaved into active N-terminal fragments, which then tra
201 arasite, but unlike other LCAT enzymes it is cleaved into two proteolytic fragments that share the re
204 In contrast to other rhamnosidases, BT3686 cleaved l-Rha-alpha1,4-d-GlcA linkages through a retaini
205 that high expression of the autophagy marker cleaved LC3 expression correlates with poor clinical out
206 usly happens until all of the RNA probes are cleaved, leaving the nanoparticles unprotected and thus
209 d the association of total (M65) and caspase-cleaved (M30) serum keratin-18 fragments (n = 204) with
210 luble native trimeric form of an efficiently cleaved membrane-bound Env, 4-2.J41, may be beneficial f
211 rminal four-C2 domain module; and 4) calpain-cleaved mini-dysferlinC72, which is particularly resista
213 ee new components in the cavity of hexon-the cleaved N terminus of precursor protein VI (pVIn), the c
214 terminus of precursor protein VI (pVIn), the cleaved N terminus of precursor protein VII (pVIIn2), an
217 he Notch pathway by nuclear translocation of cleaved Notch1 intracellular domain (NICD) and upregulat
219 The present study investigates whether the cleaved occludin is released into the blood stream and h
220 ing the plasma membrane, signal peptides are cleaved off and mature domains reach their destinations
221 is synthesized with a C-terminal extension, cleaved off by a specific endopeptidase during maturatio
222 ed that the RxLR sequence of native AVR3a is cleaved off prior to secretion by the pathogen and the N
223 Following the ligation reaction, SpyTag is cleaved off, rendering PBSL traceless, and only the labe
224 o acid ester moiety, which are enzymatically cleaved-off inside cells to release the free nucleoside
225 ived OPN for HSC aging and identify thrombin-cleaved OPN as a novel niche informed therapeutic approa
229 sion molecule-1 and endocan [full-length and cleaved p14 fragment]) were obtained before and after LT
233 which one biotinylated electrochemistry (EC)-cleaved peptide was identified after affinity enrichment
235 in N-termini to comprehensively characterize cleaved podocyte proteins in the glomerulus in vivo We f
236 we found overexpression of caspase-3, higher cleaved poly (ADP-ribose) polymerase levels (p < 0.007),
237 shown by an increase in Bcl2-like protein 4, cleaved Poly ADP-Ribosyl Polymerase 1 and cleaved Caspas
239 is, as reflected by caspase-3/7 activity and cleaved poly(ADP-ribose) polymerase, in different cell l
240 hased, trans-acting siRNAs (tasiRNAs), whose cleaved precursor fragments are converted to double-stra
245 beta-Amyloid precursor protein (APP) and its cleaved products are strongly implicated in Alzheimer's
246 rates low coverage reads at both ends of the cleaved products, we corrected this loss of sequencing c
247 d, an unexpected in vivo abundance of stable cleaved proteins revealed pervasive, functionally releva
256 I transmembrane protein that is subsequently cleaved, resulting in secretion of its large ectodomain
257 rd of a slit allele (slit-UC) that cannot be cleaved revealed that midline repulsion is still present
261 Moreover, the 60S subunits containing ES7c-cleaved rRNA cofractionate with intact subunits in sucro
263 Fusion occurs only after S proteins are cleaved sequentially, first during their secretion throu
265 envelope structure has depended in part on a cleaved, soluble trimer, known as SOSIP.664, stabilized
266 13, cryo-EM and x-ray structures of soluble, cleaved SOSIP Env trimers from the clade A BG505 strain
267 hat specific enrichment of electrochemically cleaved spirolactone-containing peptides can be used for
272 particular glycan modifications, yet always cleaved the peptide bond immediately preceding the glyco
273 riptase to an active protease, which in turn cleaved the pericellular substrates protease-activated r
274 he drug from the nanoparticle, but that once cleaved, the drug escapes the acidic endo-lysosomal comp
276 tastatic IECs contained both full-length and cleaved TLR3, demonstrating surface expression of both f
278 that the sequence of APP and possibly other cleaved TM helices may be designed, in part, to make the
279 HIV-1 envelope spike [Env; trimeric (gp160)3 cleaved to (gp120/gp41)3] induces membrane fusion, leadi
280 IV-1 envelope spike [Env; trimeric (gp160)3, cleaved to (gp120/gp41)3] poses challenges for vaccine d
281 lpha-substituted homobenzylic aldehydes were cleaved to benzylic aldehydes and ketones, respectively,
282 entiated [4Fe-4S] cluster and is reductively cleaved to generate a 5'-deoxyadenosyl radical, which in
283 elenium, the B-B and C(1) -H bonds of 8 were cleaved to give the cyclic 1,9-diborylanthracene 9.
284 lpha-carotene, a provitamin A carotenoid, is cleaved to produce retinol (vitamin A) and alpha-retinol
286 ther reaction with NaTeC6H5 were reductively cleaved to provide 2 equiv of the corresponding aromatic
288 branched products could be straightforwardly cleaved to the corresponding esters or amides using a re
289 ident protein, to the Golgi where SREBP-2 is cleaved to translocate to the nucleus and activate gene
290 uinoline directing group that can be readily cleaved to unmask net beta,gamma-dicarbofunctionalized c
293 solution from those adopted by a stabilized, cleaved trimer (SOSIP) or by a membrane-bound Env trimer
294 lope glycoprotein (Env), such as the soluble cleaved trimer BG505 SOSIP, have improved the elicitatio
295 ans we confirmed that this engineered Env is cleaved, trimeric, and it retains its native-like quater
297 tosol via N-terminal presequences, which are cleaved upon exposure to the mitochondrial processing pr
301 a folded state, its thioester bond could be cleaved with the small-molecule nucleophiles methylamine
302 es coupled to the antibodies are efficiently cleaved without loss of protein target antigenicity.
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