ライフサイエンスコーパス: co-regulation

1 ical evidence for chromosomal periodicity of co-regulation.

2 xes can be accommodated in the networks with co-regulation.

3 s was originally ascribed to the benefits of co-regulation.

4 omologous genes on chromosomes implies their co-regulation.

5 urnover and occupancy during transcriptional co-regulation.

6 ands at the junction of immune and metabolic co-regulation.

7 and meiosis were overlapping, indicative of co-regulation.

8 n is likely to facilitate co-inheritance and co-regulation.

9 gion (UTR) sequences to mediate the observed co-regulation.

10 heir proximity or if function dictated their co-regulation.

11 howing a higher degree of complexity in gene co-regulation.

12 gene expression level changes and gene-gene co-regulations.

13 nes with recurrent, reproducible patterns of co-regulation across different conditions.

14 e TF will be inactive resulting in a loss of co-regulation across its target genes.

15 It is tempting to combine the knowledge of co-regulation among different genes and conservation amo

16 This leads to incomplete studies of co-regulation among groups of genes that might be linked

17 Co-regulation analysis of shared eQTL signals produced w

18 genes usually assume the equivalence between co-regulation and co-expression.

19 tween dependent co-expression resulting from co-regulation and independent co-expression.

20 t a remaining challenge is to identify their co-regulation and inter-dependence.

21 emporal expression pattern, indicating their co-regulation and interdependence at these stages.

22 ng multiplexed proteomics to analyze protein co-regulation and show that this allows the identificati

23 gs of murine GRHL2 and its targets displayed co-regulation and were expressed in trophoblast cells in

24 f information which support evidence of gene co-regulation, and optimizes biclusters to be supported

25 ta helps reveal the logic of transcriptional co-regulation, and provides a comprehensive view of inte

26 encodes the intuition that co-expression and co-regulation are not necessarily equivalent and hence w

27 Metabolic co-regulation between biosynthetic pathways for secondar

28 set the existence of a significant level of co-regulation between PDZ domain-encoding genes and thes

29 These findings provide new insights into co-regulation between TFs.

30 The potential basis for the co-regulation by darkness and ABA is discussed in light

31 In a select set of genes, co-regulation by dexamethasone and genistein was found t

32 -stimulated FOXO1 target genes that required co-regulation by FOXO1 and TH.

33 The transcriptional co-regulation by Kr-h1 and dFOXO may represent a broad m

34 lation of the CBF regulon involves extensive co-regulation by other first-wave transcription factors;

35 identified multiple instances of cis-acting co-regulation by using phased genotype data and discover

36 d that kinetic constraints for networks with co-regulation can be analyzed using the approach.

37 methods outlined here could better elucidate co-regulation changes for one or more pathways between t

38 Consistent with this co-regulation, cilia extension by MCCs is more severely

39 o-expression data show poor correlation with co-regulation data even in unicellular yeast.

40 In general, co-regulation enhances the constraints and therefore lar

41 is also the first report of transcriptional co-regulation existing between two subunits of the multi

42 qRT-PCR analysis of GmSNAPs indicates a co-regulation following SCN infection.

43 cts the occurrence of changes in target gene co-regulation for each candidate modulator, using a meas

44 Moreover, these co-regulations give rise to many enriched network motifs

45 t the prevalent mechanism of transcriptional co-regulation in higher eukaryotes operates with extensi

46 o identify gene modules showing evidence for co-regulation in multiple time series of gene expression

47 Taken together, our data demonstrate FA gene co-regulation in synchrony with the cell cycle and sugge

48 pectively, and represent discrete windows of co-regulation in the genome.

49 , we describe a novel mechanism of metabolic co-regulation in which an intermediate in one pathway is

50 show that deviations of the observed protein co-regulations in specific cell lines from the consensus

51 and in biological studies that incorporating co-regulation information improves upon the independence

52 y in exploiting prior knowledge, such as the co-regulation information of the genes.

53 ditions is complicated by the fact that such co-regulation is condition-specific.

54 tion the biological assumption - conditional co-regulation is needed to mine a large transcriptional

55 bioinformatic analyses suggest this type of co-regulation may be widespread across the transcriptome

56 essons that plasmids have for clustering and co-regulation may explain the logic and organization of

57 We discover three major co-regulation modes of enhancers and find defense-relate

58 These data strongly suggest that miRNA co-regulation modulates the transcriptomic response to a

59 Our results reveal a detailed CD co-regulation network among the 14 core TFs and provide

60 gene expression profiles outside of the gene co-regulation network context, leading to redundant info

61 eraction (PPI), genetic interaction and gene co-regulation networks.

62 pression in marmosets and humans, suggesting co-regulation of 2 parallel anxiolytic pathways in prima

63 Our study focused on the co-regulation of 2,4-diacetylphloroglucinol (DAPG) and p

64 , our analyses provide novel insights to the co-regulation of age-related gene expression in multiple

65 has been selected during evolution to allow co-regulation of both genes.

66 chondrocytic cells to fluid shear results in co-regulation of c-Jun N-terminal kinase2 (JNK2), c-Jun,

67 n within a clonal population of T cells, but co-regulation of CD8 and SHP-1 levels ultimately limits

68 Co-regulation of cell division processes and metabolic p

69 Co-regulation of chemotaxis genes was also found in publ

70 Moreover, we find a genome-wide co-regulation of chromatin structure by Set1 and Jhd2 at

71 pression activity of c-Myc for gene-specific co-regulation of chronic inflammation.

72 A similar co-regulation of cyclin D1 mRNA by Rac and ERK is seen i

73 quinone oxidoreductase); 2) by investigating co-regulation of entire sets of genes regulated by other

74 those of wild-type mice indicating possible co-regulation of expression levels.

75 e II (Pol2) could provide new insights about co-regulation of functionally related gene subsets.

76 Both robust co-regulation of gene expression and potential phasing o

77 y as a heterodimer, as a novel mechanism for co-regulation of gene expression by the DevRS/DosT and N

78 tions in protein expression arising from the co-regulation of genes and apply it to study the growth

79 properties such as sequence conservation and co-regulation of genes and proteins involved in differen

80 rent androgen concentrations showed temporal co-regulation of genes involved in specific biochemical

81 ption factor(s) from wBm and first report of co-regulation of genes of the T4SS and riboflavin biosyn

82 overed specific TFs that mediate conditional co-regulation of genes within 240 modules across 14 dist

83 oth conservation among orthologous genes and co-regulation of genes within a species.

84 f transcription 3 (STAT3) is involved in the co-regulation of GFAP and VEGF.

85 In this review, we focus on the co-regulation of hTERT via transcriptional regulation, t

86 Co-regulation of human immunodeficiency virus (HIV) and

87 ptome analysis revealed global p53/NF-kappaB co-regulation of immune response genes, including severa

88 The implications of the co-regulation of inflammation and social behavior are di

89 In addition, this co-regulation of key factors within the homology-depende

90 A recent study confirms activity-dependent co-regulation of membrane conductances as a mechanism un

91 pecific allosteric binding relationships for co-regulation of mRNA degradation.

92 strates application of a single promoter for co-regulation of multiple genes in a crop plant.

93 vealed that invasion and metastasis requires co-regulation of multiple target genes.

94 al recordings indicate that this homeostatic co-regulation of neurite and synapse development preserv

95 ric form of aldolase C suggesting that their co-regulation of NF-L expression could be linked to the

96 been broadly applied to mitochondria, so the co-regulation of OXPHOS genes remains largely unexplored

97 stalk between HR repair and NHEJ through the co-regulation of p53-RPA interaction by DNA-PK, ATM and

98 eir transcriptional regulation of miR-96 and co-regulation of PITX2 activity.

99 ing for genetic coupling that results in the co-regulation of promoters.

100 ation, providing additional evidence for the co-regulation of PTEN and PTENP1.

101 -function analysis identified Sox7 and Sox18 co-regulation of robo4 but not fli1a transcripts in zebr

102 lar proteins that modulate virulence and the co-regulation of secreted and non-secreted virulence fac

103 and lysosomal proteins suggests the need for co-regulation of several cellular processes in the progr

104 .5% of SuSy enzyme activity, for evidence of co-regulation of several genes of sugar metabolism.

105 ular and functional contractile phenotype by co-regulation of Smad activity at SMC promoters.

106 Transcriptional co-regulation of sNix and Nix, combined with sNix posttr

107 This stoichiometric co-regulation of STAT3 and Cryba1 could potentiate expre

108 and second, the accuracy of transcriptional co-regulation of subunits should reflect the deleterious

109 es that are regulated by alcohol through the co-regulation of TFIIIB components and define a central

110 The formation of protein complexes and the co-regulation of the cellular concentrations of proteins

111 The association and the possible co-regulation of the classical trait and transcription m

112 We have examined the role of p53 in co-regulation of the DDR and tissue regeneration followi

113 l nucleoid genes, and demonstrate an overall co-regulation of the mitochondrial nuclear-encoded genes

114 regulatory elements in common, suggesting a co-regulation of the two genes.

115 that likely explains the necessity for tight co-regulation of the ybgF and tol genes in Gram-negative

116 Co-regulation of these core genes can also provide advan

117 es for transcription factors responsible for co-regulation of these genes during the development of t

118 med an operon structure of tfsAB, suggesting co-regulation of these genes in producing the S-layer.

119 control of acetoin production as well as the co-regulation of these genes with those that influence m

120 ted in cooperative binding, thereby enabling co-regulation of these genes.

121 encies across transcriptional pathways where co-regulation of transcriptional units may make many gen

122 data define a novel molecular mechanism for co-regulation of two distinct clathrin-independent endoc

123 Existence and co-regulation of two ubiquitous promoters may be a mecha

124 plexes in mammalian Hox gene clusters toward co-regulation of vertebral identity.

125 hundreds of TFBS without prior knowledge of co-regulation or coexpression.

126 one another on the chromosome to facilitate co-regulation or couple gene expression to growth rate.

127 gh microarray results show a transcriptional co-regulation pattern and do not imply that the gene pro

128 -expression, showing significantly different co-regulation patterns between normal and tumor states.

129 eral coherent clusters of genes, which share co-regulation patterns that are highly correlated with t

130 This metabolic co-regulation provides a strategy for P. protegens to op

131 correlations to investigate transcriptional co-regulation provides valuable insight into the nature

132 tory motif analyses, which can capture their co-regulation relationship much better than other scores

133 The mechanism of target co-regulation remained unknown.

134 In this study, we designed a novel co-regulation score between a pair of operons based on a

135 Ignoring the context-specific nature of co-regulation significantly reduces the ability of clust

136 Despite their evident co-regulation, substitutions of individual Chk1 regulato

137 Such correlations may reveal patterns of co-regulation that are indicative of biochemical pathway

138 of histone modifications combine with miRNA co-regulation to form a VDR-regulated feed-forward loop

139 we understand that incorporating conditional co-regulation to study large expression data helps us id

140 determined by module-level regulation (e.g. co-regulation via the same signaling system), as well as

141 To test for HuR's role in co-regulation, we measured the reporters in HuR KO cells

142 To obtain clues about possible co-regulation within co-expression clusters, we searched

143 Such co-regulation would create a positive feedback circuit;