ライフサイエンスコーパス: code

1 itations of level of care on ICU day 1 (full code).

2 the length of the cochlear partition (place code).

3 ovel sparsity-based probabilistic population code.

4 datasets with matching model assumptions and code.

5 tion pressures) as evaluated by using EXPLO5 code.

6 uits and wiring diagrams as well as software code.

7 s and technologies for expanding the genetic code.

8 ng the finalization of the universal genetic code.

9 cation or the analysis of signals of unknown code.

10 hereby facilitate the reading of the histone code.

11 istribution of errors in an error correcting code.

12 re Economic Research Service Urban Influence Codes.

13 ural activity and its implication for neural codes.

14 ssification of Diseases 9th or 10th Revision codes.

15 national Classification of Diseases, billing codes.

16 h Revision, Clinical Modification (ICD-9-CM) codes.

17 f Federal Regulations, and state legislative codes.

18 tences on both speech recognition and neural coding.

19 ed on stimulus features) interact in sensory coding.

20 mpal representations and support prospective coding.

21 eases, Ninth Revision, Clinical Modification codes 299.0, 299.8, or 299.9 recorded in Kaiser Permanen

22 Classification of Diseases-Ninth Revision-CM codes 35.05 and 35.06) between January and November 2013

23 rnational reference panel for HEV genotypes (code 8578/13) showed viral load results falling within t

24 The "tubulin code"-a combination of tubulin isotypes and tubulin post

25 structure, which in turn improves population-coding abilities.

26 the thiol-redox proteomic technique, isotope-coded affinity tag labeling, to quantify the extent of N

27 alled SNOxICAT (S-nitrosothiol redox isotope-coded affinity tag), we found that exposure to NO2(-) un

28 rrhosis, as defined by a validated diagnosis code algorithm.

29 A common variant (rs1619661; coded allele: T) significantly modified the QT-PM10 asso

30 subjects failed to identify any large-effect coding alleles of lower frequency influencing the risk o

31 Gene-specific expansion of the genetic code allows for UGA codons to specify the amino acid sel

32 y without manually downloading and rerunning code and can provide an audit trail for analyses of data

33 Code and data available at: majiq.biociphers.org/jha_et_

34 Our code and data is available for download from github.com/

35 ore complex examples, along with programming code and data sets, to show how Bayesian analysis takes

36 In addition to source code and installation instructions, we also provide exam

37 cupSODA source code and precompiled binaries (Linux, Mac OS/X, Windows)

38 noses were identified using Medicare billing codes and categorized as nonmelanoma skin cancer (NMSC),

39 l Classification of Diseases, Ninth Revision codes and clinical data.

40 strate their active participation in spatial coding and contextual representation.

41 were G:C to A:T, their distribution between coding and non-coding regions and synonymous-to-non-syno

42 For somatic point mutations in coding and non-coding regions of the genome, we propose

43 Thus, the ASCC3 gene expresses both coding and non-coding transcript isoforms with opposite

44 We describe new mechanisms of coding and noncoding alteration and identify ten recurre

45 g to take shape, but it's clear that in both coding and noncoding RNAs, dynamic modifications represe

46 We sequenced coding and regulatory elements for 608 genes potentially

47 , which could lead to alterations in sensory coding and taste-related behaviors.

48 lective accumulation of rare variants in the coding and the UTR sequences within the genes of suicide

49 on in stress granules correlates with longer coding and UTR regions and poor translatability.

50 r phase locking, in the auditory nerve (time code), and the spatial distribution of responses along t

51 predictions obtained with INCL++ and ABLA07 code, and a satisfactory agreement is observed.

52 ntivizing collaboration, sharing statistical code, and creating more decentralized data sharing platf

53 ort, medical record billing codes, procedure codes, and death records.

54 15% redundant indels in dbSNP, 29% in COSMIC coding, and 13% in COSMIC noncoding datasets across all

55 undant indels in dbSNP; 2,118 more in COSMIC coding, and 553 more in COSMIC noncoding indel dataset i

56 ll of our functions and accompanying example code are available in an open online repository.

57 The non-coding ASCC3 isoform counteracts the function of the pro

58 otably, this includes a shift from a protein-coding ASCC3 mRNA to a shorter ALE isoform of which the

59 light emitting diodes, solar cells, optical codes, biomedicine and so on.

60 BX1, which colocalizes with the EMSY protein coded by C11orf30.

61 icted "noncoding RNAs" to conventional mRNAs coded by protein-coding genes.

62 by out-of-field excitation enhances temporal coding by expanding the range of theta phase precession.

63 ens concerns the acute regulation of sensory coding by the auditory cortex as demonstrated by electro

64 The source code can be compiled for execution on popular platforms

65 olfactory sensory neurons increases the odor-coding capacity, providing a means of efficient sensory

66 ate that the nonconsensus nucleotide triplet code constitutes a key signature providing PIC binding s

67 re, MT glutamylation, as part of the tubulin code, controls ciliary specialization, ciliary motor-bas

68 ies such deaths by assigning them diagnostic codes corresponding to "legal intervention" in accordanc

69 Rewriting the genetic code could lead to new biological functions such as expa

70 ggest diagnostic, procedure, and therapeutic codes derived from insurance billing claims accurately r

71 been suggested that social prediction errors-coding discrepancies between the predicted and actual ou

72 ion study (GWAS) risk variants reside in non-coding DNA sequences.

73 Here, we develop a statistically founded non-coding driver-detection method, ncdDetect, which include

74 thogonal AP firing, which may support sparse coding during hippocampal information processing.

75 udies, however, have shown that neural value coding dynamically adapts to the statistics of the recen

76 s of this model predict that sparse assembly codes emerge in this microcircuit motif under spike timi

77 ative splicing (AS) that occurs at the final coding exon (exon 47) of the Cav2.1 voltage-gated calciu

78 ults and highlight the importance of neurons coding feature values for parallel learning of values fo

79 Here, we reveal the brain's code for facial identity.

80 Each of the seven novel genes code for proteins associated with one or more molecular

81 id cells mutually interact to form a coupled code for space.

82 Single units coded for diverse conjunctions of variables, with differ

83 mbination evolve between a target locus that codes for a seasonally selected trait and a plasticity m

84 RC1, activates transcription of Sall4, which codes for a transcription factor essential for subsequen

85 e of five diagnosis codes plus two treatment codes for any skin-directed therapy were likely to accur

86 orm allows the generation of binary temporal codes for efficient data encoding.

87 The Epulopiscium genome codes for many of the conserved positional guide protein

88 embly of RNAP, E. coli mutants lacking rpoZ (codes for omega) are viable due to the association of RN

89 ve sensory information, while frontal cortex codes for prospective action.

90 heories positing that parietal cortex mainly codes for retrospective sensory information, while front

91 t identification of the blaOXA48 gene, which codes for the carbapenemase OXA-48, in lysate samples fr

92 ases were identified using glaucoma surgical codes for trabeculectomy, complicated trabeculectomy, gl

93 missense mutations in the RPS23 gene, which codes for uS12, are reported in two unrelated individual

94 the supply of full-length, functional mRNAs coding for a variety of proteins essential to cell growt

95 it is not surprising that mutations in genes coding for components of the ubiquitin system cause immu

96 However, the gene coding for hexokinase-2, which catalyzes the first step

97 The gene coding for middle T antigen (MT) is the murine polyomavi

98 hat under favourable growth conditions mRNAs coding for proteins involved in the translation machiner

99 recently emerging features that distinguish coding from noncoding transcription and discuss how thes

100 We also report a novel protein-coding gene evolution-D6Ertd527e-in which an MT LTR prov

101 he lncRNA, its binding protein MYH9, and the coding gene FOXE1 underlies the predisposition to PTC tr

102 encompassing the 3' end of the delta protein-coding gene.

103 The four mt genomes contain 12 protein-coding genes (viz.

104 long inverted repeat with one or two protein-coding genes and conserved non-coding regions putatively

105 on of extracellular matrix remodeling-enzyme coding genes and increased levels of some of their inhib

106 lymerase II (pol II) transcribes all protein-coding genes and many noncoding RNAs.

107 bio-annotations of both high-quality protein coding genes and ncRNAs, we considered the associations

108 functional interrogation of not only protein-coding genes but also noncoding DNA.

109 historical focus on transcription of protein-coding genes has left the roles of Pol III in organismal

110 Transcriptional regulation of protein-coding genes is a major mechanism of controlling cellula

111 s adaptability, as many mutations in protein-coding genes occurred during the outbreak.

112 ts shifts the steady-state output of protein-coding genes toward circular RNAs.

113 ximately one-quarter of A. baumannii protein coding genes were differentially expressed in vivo compa

114 this study, we highlight that together with coding genes, (antisense) long non-coding RNAs are dereg

115 Each mitogenome contained 13 protein coding genes, 2 ribosomal RNA and 22 transfer RNA genes,

116 expressed, annotated genes, 78 novel protein-coding genes, and 567 putative long intergenic noncoding

117 al information for almost 80 million protein-coding genes, including a comprehensive set of general a

118 l proportion of the reads mapping to protein-coding genes, long ncRNAs, and antisense RNAs were due t

119 e observed for all but 265 annotated protein-coding genes.

120 RNAs" to conventional mRNAs coded by protein-coding genes.

121 and even supporting evolution of new protein-coding genes.

122 exons is found to be extensive among protein coding genes: 23.5%-59.3% (95% confidence interval) of h

123 and the mechanisms by which variation in non-coding genetic sequences contributes to disease.

124 urons helps functional interpretation of non-coding genetic variants associated with these diseases.

125 improve the functional interpretation of non-coding genetic variants in the molecular genetic dissect

126 and extends potential involvement of the non-coding genome in its pathogenesis.

127 entified sequence variants, localized to non-coding genomic regions, associated with kidney function.

128 , the proposed combination of revenue center codes had 94.6% sensitivity (95% CI, 94.3-94.9%) and 96.

129 key spatial searching data structure in our code, i.e., a lattice-free cell list, with a time and sp

130 The code implements OpenMP parallelization and scales to hun

131 ther, we elucidated a triplet stereochemical code in the stereopure ASOs, 3'-SpSpRp, that promotes ta

132 s of voltage- and calcium-gated ion channels coded in NEURON to 211 clusters.

133 h as those that use high-dimensional quantum codes in a modular architecture, have potential benefits

134 ed patients who take TOAMs via National Drug Codes in Part D claims.

135 rom International Classification of Diseases codes in Sweden.

136 activity on spatial learning and hippocampal coding in a plus maze task that requires both structures

137 ontal cortex are involved in vibrotactile WM coding in humans.

138 igh-dimensional rsc structure on information coding in the neuronal ensembles.

139 Our results support the argument that odor coding in the olfactory bulb depends on the recent histo

140 an provide powerful insights into population coding in touch.

141 The two primary theories of peripheral pitch coding involve stimulus-driven spike timing, or phase lo

142 R code is available at github.com/james-e-barrett.

143 Code is available in the Supplementary data available at

144 r view of how tRNA, and possibly the genetic code, is diversified in nature.

145 form counteracts the function of the protein-coding isoform, indicating crosstalk between them.

146 Testing it on the toric code, it has higher threshold than a number of known dec

147 We created zip code level indicators of happiness, food, and physical a

148 ty level and neighborhood poverty at the zip-code level.

149 The universality of the code likely results from the combination of a frozen acc

150 approach identified two long intergenic non-coding(linc)RNAs, lincRNA-Cox2 and lincRNA-AK170409, tha

151 ow attenuation on VNCa images by using color-coded maps and performed a quantitative analysis of CT n

152 This fundamental sensory coding mechanism facilitates spatial discrimination and

153 this regulation constitutes a global 'silent code' mechanism that controls the functional diversity o

154 As but have also recently been identified in coding (messenger) RNAs as well.

155 peripheral axon injury, dysregulation of non-coding microRNAs (miRs) occurs in dorsal root ganglia (D

156 We propose that similar DNA codes might be used to confer multiple regulatory functi

157 sequence features and probabilistic splicing code models, we find evidence of splicing antagonism bet

158 may be closely related to mixture of sparse coding models.

159 Due to the degeneracy of the genetic code, most amino acids can be encoded by multiple synony

160 temporal and spatial resolution, the neural code must be smooth at the voxel and functional level su

161 Over 4 million coding mutations are described in v78 (September 2016),

162 The extent to which non-coding mutations contribute to Mendelian disease is a ma

163 tification of causal variants has discovered coding mutations in some AD-associated genes, a lot of r

164 individuals with inherited loss-of-function coding mutations in TERT or poly(A)-specific ribonucleas

165 responsible for inhibiting expression of the coding NDC80 mRNA isoform.

166 This could simplify surface code networks which require spatially controlled interac

167 pair of the genome that may be transcribed: coding, noncoding, and intergenic regions, as well as re

168 t, we characterized the unique expression of coding, noncoding, and intergenic RNAs in the mature mou

169 ciation was found between ACQ and single non-coding nucleotide variants of the GLRB gene (rs78726293,

170 educes the peripheral temporal resolution in coding odor stimuli and allows for robust olfactory beha

171 nce-based framework that learns a regulatory code of DNA methylation using a deep convolutional neura

172 Code of Federal Regulations, and state legislative codes

173 y by refactoring and optimizing the source C code of QUBIC; and (ii) a set of comprehensive functions

174 We reveal a combinatorial code of TFs, cell surface molecules, and determinants of

175 t demand that clinicians sacrifice their own codes of conduct out of cultural respect.

176 s by forbidding judgment on foreign societal codes of conduct.

177 Understanding representations of neural codes of hippocampal-neocortical networks during sleep w

178 rtical responses, adult patterns in cortical coding of binaural timing cues were measured.

179 uning of neural activity and impaired sparse coding of information, and deficits in the temporal tuni

180 Fine-grained coding of location is thought to depend on the hippocamp

181 re, we demonstrate sexually dimorphic neural coding of odorants by olfactory sensory neurons (OSNs),

182 and the inhibitory effect of changes in the code on horizontal gene transfer.

183 few studies have addressed the issue of odor coding on top of continuous odorous backgrounds.

184 We found that at least one of five diagnosis codes plus two treatment codes for any skin-directed the

185 Here, the authors show that a non-coding polymorphic regulatory element at 7p14.3 may pred

186 ICANCE STATEMENT The integrin beta3 Leu33Pro coding polymorphism has been associated with autism spec

187 The ITGB3 coding polymorphism Leu33Pro (rs5918, Pl(A2)) produces h

188 ntrachromosomal rearrangements fusing the 3' coding portion of the EGFR gene to the 5'-UTR of the SEC

189 pected large proportion of NATs with protein coding potential, as estimated by ribosome release score

190 Thus, we hypothesize that the coding principle of facial features in the middle patch

191 based on self-report, medical record billing codes, procedure codes, and death records.

192 Theories like predictive coding propose that lower-order brain areas compare thei

193 t extends 13 nucleotides into the N-terminal coding region and, when a mRNA structure overlaps or par

194 ion of any intergenic or deeply intronic non-coding region, indicating that proximal regulatory seque

195 in RNA (shRNA) targeted against the reporter coding region, we have characterized the dynamics of the

196 and a shorter construct containing only the coding region.

197 le small open reading frames upstream of the coding region.

198 RNAs with 3' ends within protein-coding regions and introns were less stable than mRNAs t

199 T, their distribution between coding and non-coding regions and synonymous-to-non-synonymous mutation

200 ed a greater contribution of SNPs in protein-coding regions and within 3'-UTR regions of genes.

201 However, because protein-coding regions are under high selective constraints, the

202 or somatic point mutations in coding and non-coding regions of the genome, we propose CScape, an inte

203 r two protein-coding genes and conserved non-coding regions putatively involved in replication and/or

204 outside of functionally well-defined protein coding regions.

205 tely predict all or even most of the protein-coding regions.

206 mutations occur at similar frequencies as in coding regions.

207 terious genomic variation, especially in non-coding regulatory regions of human genome.

208 ngs show the importance of investigating non-coding regulatory variants when determining risk factors

209 ments are transformed into meaningful memory codes relies on the ability to integrate them with exist

210 with the expression of an antisense long non-coding RNA (lncRNA) that has previously been shown to pr

211 ZNF750 promoted the expression of a long non-coding RNA (TINCR), which mediated both cancer-inhibitio

212 ps among RNAs for mutation detection and non-coding RNA classification.

213 tional profiling, we found that the long non-coding RNA MIR100HG and two embedded microRNAs, miR-100

214 the complex, underscoring its role as a non-coding RNA processing/degradation unit.

215 a chromatin environment that influences non-coding RNA production, DNA methylation, and transcriptio

216 MicroRNAs (miRNAs) are small non-coding RNA species that have been shown to have roles in

217 racterization of a novel long intergenic non-coding RNA with MyoD-regulated and skeletal muscle-restr

218 genomic output is transcribed as non-protein coding RNA, <2% of the protein data bank structures comp

219 To date, a large number of long non-coding RNAs (lncRNAs) have been recently discovered thro

220 transcription of a wide variety of long non-coding RNAs (lncRNAs) in the genomes of several organism

221 New evidence indicates that long non-coding RNAs (lncRNAs) play crucial roles in epigenetic a

222 Although long non-coding RNAs (lncRNAs) regulate various cellular events,

223 small nucleolar RNAs (snoRNAs) and long non-coding RNAs (lncRNAs), undergo trans-splicing and polyad

224 r, we identify multiple neurite-targeted non-coding RNAs and RNA-binding proteins with potential regu

225 ther with coding genes, (antisense) long non-coding RNAs are deregulated in skin tissue of systemic s

226 might be attributed to the hypothetical non-coding RNAs embedded within the gene.

227 PIWI-interacting RNAs (piRNAs) are small non-coding RNAs essential for animal germ cell development.

228 Various families of non-coding RNAs have been identified as substrates of the co

229 raconserved regions (T-UCRs) encode long non-coding RNAs implicated in human carcinogenesis.

230 utant are correlated with changes in the non-coding RNAs produced by Pol IV and Pol V.

231 In trypanosomes, all mRNAs, and non-coding RNAs such as small nucleolar RNAs (snoRNAs) and l

232 6-30-nucleotide germ line-specific small non-coding RNAs that have evolutionarily conserved function

233 MicroRNAs (miRNAs) are small, non-coding RNAs that play critical roles in the post-transcr

234 The NtcA regulon also included eight non-coding RNAs, of which Ncr1071, Syr6 and NsiR7 were exper

235 bias transcription toward coding versus non-coding RNAs.

236 for the quality control of mitochondrial non-coding RNAs.

237 s to the analysis of sleep-associated neural codes (SANCs).

238 ction measures and a manualised consultation-coding scheme were used.

239 tained NHS cases using exhaustive diagnostic code searching (1992-2010, >2500 medical record reviews)

240 evolutionarily plastic both at the level of coding sequence and expression across A. thaliana access

241 al start codon while the bulk of the protein-coding sequence evolved through a CAG repeat expansion.

242 analyzed the genetic variation in the FOXP2 coding sequence in 63 chimpanzees, 11 bonobos, 48 gorill

243 Each gene has a coding sequence insertion/deletion mutation within the S

244 l II into transcriptional elongation) to the coding sequence of an active gene, ADH1, independently o

245 ion because overexpression of a noncleavable coding sequence of MYB83 significantly increased plant s

246 ion of an mRNA, despite carrying a canonical coding sequence, can directly cause gene repression.

247 Cryptic polyadenylation within coding sequences (CDS) triggers ribosome-associated qual

248 ity and/or translation, while changes in the coding sequences lead to mRNAs encoding distinct protein

249 r have largely focused on genes, whereas non-coding sequences remain relatively unexplored.

250 Further analysis of the AraEXLB8 coding sequences showed high conservation across the Ara

251 fected by recurrent mutations disrupting non-coding sequences was similar to that affected by recurre

252 ty patterns and coverage similarities across coding sequences, and showed that they yield comparable

253 ally, Rho promotes termination at the end of coding sequences, but it can also terminate transcriptio

254 y activating transcription, altering protein-coding sequences, producing noncoding RNAs, and even sup

255 To remove rRNA and enrich coding sequences, subtractive hybridization procedures h

256 r to that affected by recurrent mutations to coding sequences.

257 l tool for the genome-wide detection of AARS coding sequences.

258 rent 3' untranslated regions (3'UTRs) and/or coding sequences.

259 her, these results indicate a functional non-coding SNP in EPHA2 promoter affects PAX2 binding and re

260 te loss-of-function effects of multiple rare coding SNVs found in SCZ subjects in the GIT1 (G protein

261 Predictive coding suggests that the brain infers the causes of its

262 approach is also suggestive in many cases of coding techniques that can approach fundamental limits i

263 ational modifications (PTMs), creating a PTM code that controls the function of proteins in space and

264 These data reveal a unique molecular code that defines endogenous proteins as inflammatory st

265 tified brain regions support action category codes that are important for action recognition and acti

266 frontal cortex that exhibit action category codes that are similar across viewing of dynamic videos

267 s are accounted for by a model of numerosity coding that has been used to explain neural responses in

268 ntity in propagated calls relies on a neural coding that is robust to intensity changes, signals' qua

269 o the raw data were masked to study group by coding the groups until after the analyses were complete

270 The genetic code-the language used by cells to translate their genom

271 A group of researchers are pledging to make code they produce for data analysis and modeling open so

272 eristics of a proposed set of revenue center codes to correctly identify ICU stays among hospitalized

273 seases, Ninth Revision-Clinical Modification codes to identify patients primarily admitted for EH (n

274 comes Study (CANTOS) used computer-generated codes to randomly allocate 10 061 men and women with a h

275 How these cells code together a complex visual scene is unclear.

276 the ASCC3 gene expresses both coding and non-coding transcript isoforms with opposite effects on tran

277 also monitored the behaviors of X-linked non-coding transcripts before and after XCI.

278 satellite array produces a unique set of non-coding transcripts, and RNAs present at active centromer

279 as integrated into a needle to receive Golay-coded transmissions from the probe and these data were p

280 ce of developmental continuity in the neural code underlying numerical representation and demonstrate

281 of MFC reward signaling have inferred value coding upon temporally sustained activity during the per

282 Validating the accuracy of billing claim codes used during the care of diabetic retinopathy is a

283 ently, a novel partial loss-of-function AKT2 coding variant (p.Pro50Thr) was identified that is nearl

284 d fine-mapping analyses identified a protein-coding variant, rs4788863 in SLC16A5, that was associate

285 n the Hutterites suggest that these rare non-coding variants are likely to mediate their effects on l

286 mulants inhibit DA reuptake and multiple DAT coding variants have been reported in patients with neur

287 We identified 14 coding variants in 13 genes, of which 8 variants were in

288 Coding variants in the APOL1 gene are associated with ki

289 lated genetic risk factors for AD, including coding variants in the gene TREM2 (triggering receptor e

290 Among these non-coding variants, somatic insertions are among the least

291 analyzed and replicated genome-wide protein coding variation in a total of 8,227 individuals with T2

292 ensive assessment of the consequences of non-coding variation.

293 ed by evolution to bias transcription toward coding versus non-coding RNAs.

294 o implement the new method, the BLAST source code was modified to allow the researcher to pass to the

295 The Gini index for zip codes was divided into quartiles for low, low-middle, hi

296 ata indicated that multiple counties and ZIP codes were affected.

297 Procedure codes were used to determine the either an open approach

298 d is implemented in specifically developed R code, which has been made publicly available.

299 OpenRBC, a coarse-grained molecular dynamics code, which is capable of performing an unprecedented in

300 ermore, we demonstrated that a bidirectional code with both odor-evoked inhibition and excitation in