ライフサイエンスコーパス: coevolution

1 rope is a canonical example of host-pathogen coevolution.

2 ese intriguing signatures of host-microbiome coevolution.

3 ion molecule (SLAM) family during host-virus coevolution.

4 nsect herbivory remains a classic example of coevolution.

5 complex and diverse as a result of long-term coevolution.

6 les could result from plastid-nuclear genome coevolution.

7 ither single-species evolution or reciprocal coevolution.

8 heek teeth have been viewed as an example of coevolution.

9 e family from the viewpoint of host-pathogen coevolution.

10 the host, contrary to models of synchronized coevolution.

11 increase; for example, during host-parasite coevolution.

12 , and is a focus for studies of insect-virus coevolution.

13 cription at different stages of the CMV-host coevolution.

14 ired by models of black hole and host galaxy coevolution.

15 n is not the major driver of plastid-nuclear coevolution.

16 -mediated sexual selection in the context of coevolution.

17 between hosts and their parasites result in coevolution.

18 by peptide genes influences ligand-receptor coevolution.

19 d by a significant degree of ligand-receptor coevolution.

20 eptide genes might influence ligand-receptor coevolution.

21 een the sexes known as sexually antagonistic coevolution.

22 roviding a striking example of predator-prey coevolution.

23 d overall importance of HGT in host-parasite coevolution.

24 individual genome but also suggests Rab/TBC coevolution.

25 y of the host-virus "arms race" during their coevolution.

26 ergence for an adaptation likely involved in coevolution.

27 ns, resulting in inter-specific gene-culture coevolution.

28 yet largely unexplored, role in plant-insect coevolution.

29 ffer opportunities to capture the process of coevolution.

30 ce tracking than with the arms race model of coevolution.

31 gered the lineage and participated in Ab-Env coevolution.

32 d extracellular transmission in fungus-virus coevolution.

33 he best-documented examples of host-pathogen coevolution.

34 s often under selection during host-parasite coevolution.

35 mportance of coherently considering CO2-SLCF coevolutions.

36 hus, the next step in this canonical case of coevolution after a species jump has been further escala

37 Our data, which demonstrate human TCR-MHC coevolution after divergence from rodents, explain the g

38 One leading explanation, antagonistic coevolution (also known as the Red Queen), postulates a

39 cases truly represent sexually antagonistic coevolution; alternatively, ecological or neutral proces

40 Considering the long history of host-microbe coevolution, an impact of microbial infection on host ge

41 of a small number of restraints predicted by coevolution analysis can provide a powerful restriction

42 ng Gag-protease single genome sequencing and coevolution analysis of protein sequences in 4 patients

43 Using sequence coevolution analysis, we found evidence for a similar an

44 ation (ERC) is a sequence-based signature of coevolution and a potentially useful signature to infer

45 storical biogeography or uncover patterns of coevolution and diversification.

46 a striking example of sexually antagonistic coevolution and dramatically expand the value of nematod

47 uires theoretical treatments of gene-culture coevolution and dual inheritance, in addition to purely

48 een the fungus and the host in shaping their coevolution and ecological role in both natural grass ec

49 lation of the response to dopamine drove the coevolution and intramolecular communications between co

50 ent of community assembly, which facilitates coevolution and may ultimately result in cospeciation.

51 variants inside cells, minimizing undesired coevolution and propagation of nonfunctional library mem

52 s are a potential signature of predator-prey coevolution and reveal unique ways in which predator-pre

53 st expansion followed by local host-pathogen coevolution and secondary sympatry, resulting in local s

54 tocol to study the interplay between residue coevolution and structural conservation of protein-prote

55 e describe a method that integrates sequence coevolution and structural context information using a p

56 identified by covariance analysis of residue coevolution and structural-alphabet-based local dynamics

57 into two distinct groups as a result of such coevolution and that hybrid networks of these groups are

58 r basic understanding of KIR and MHC class I coevolution and to the study of NK cell responses in thi

59 perimental work indicating that plasmid-host coevolution, and epistatic interactions on fitness costs

60 eir essential saprophagic existence prevents coevolution, and no host-parasite virulence trade-off ca

61 lity may have facilitated 'tight' ant-fungus coevolution, and shifts to new fungal cultivars may have

62 nection between the origins of biodiversity, coevolution, and the role of gene and genome duplication

63 is vaccine-driven example of human/bacterial coevolution appears to confirm the Red Queen hypothesis,

64 at CLPs participate in dynamic host-parasite coevolution, as more mobile hosts can fuel CLP adaptatio

65 udy, we investigated the structural basis of coevolution at the Gag p1-p6 cleavage site with the nelf

66 cohesive framework to understand host-virus coevolution better.

67 ility, as well as pointing to genus-specific coevolution between ADF proteins and their native actin.

68 The computationally inferred pattern of coevolution between amino acid residues and the predicte

69 or by intrinsic biological interactions like coevolution between antagonists is a matter of active de

70 , and will help quantify complex patterns of coevolution between CLPs and their various hosts.

71 ent theory suggests that a community, due to coevolution between constituent species, may act as a pa

72 ins adaptive changes in brain structure, and coevolution between functionally related structures.

73 of Geraniales in a systematic evaluation of coevolution between genes encoding subunits of the PEP h

74 To determine whether coevolution between host and pathogen influences disease

75 An understanding of coevolution between hosts and parasites leads to predict

76 of TRAF3IP2 may have occurred by competitive coevolution between mammalian hosts and viruses.

77 A never-ending arms race drives coevolution between pathogens and hosts.

78 heir primary sequence, suggesting an ancient coevolution between peptide and receptor genes.

79 However, clear coevolution between plant competitors has been rarely do

80 force behind the diversity of life, pairwise coevolution between plant competitors has received less

81 nd in sequence data, we explore the sequence coevolution between signaling partners to better underst

82 ually found in the form of strict one-to-one coevolution between species.

83 er, Sharon et al. report direct evidence for coevolution between TCR and MHC genes, helping to explai

84 ological, and biochemical studies to explore coevolution between the APOL1 gene and trypanosomes.

85 Coevolution between the emergent miRNAs and their target

86 onal interactions between proteins result in coevolution between the interaction partners, causing th

87 These results suggest a functional coevolution between the Phe43 cavity and the gp120 inner

88 plasmid by an avirulent ancestor of R. equi, coevolution between the plasmid and the chromosome took

89 We wondered whether coevolution between viruses and their natural host would

90 ivity ranges) associated with bacteria-virus coevolution broke down to a greater extent in the presen

91 nsistent with invertebrate-virus 'arms-race' coevolution, but equivalent signatures of selection are

92 challenge the evidence of tick-host-pathogen coevolution by hypothesizing that A. phagocytophilum uti

93 olutionary model, we show that predator-prey coevolution can also drive population cycles where the o

94 Our results show that coevolution can be a major process shaping species trait

95 that the direct coupling analysis of residue coevolution can be extended to connect the different sca

96 Although coevolution can drive diversity and specificity within s

97 he present study, however, demonstrates that coevolution can maintain stable host mate choosiness and

98 These findings suggest that strong pairwise coevolution can persist even in complex communities, whe

99 Coevolution can promote long-term coexistence of two com

100 nd reveal unique ways in which predator-prey coevolution can shape, and possibly reverse, community d

101 rimental methods to determine which types of coevolution (conflicting or nonconflicting) drive specie

102 cid divergence, presumably due to host-virus coevolution, duck IFITM3 is functional against IAV.

103 tem in which to study plastid-nuclear genome coevolution due to the highly elevated evolutionary rate

104 mics in the complex system, where host-virus coevolution facilitated coexistence of predator and viru

105 The residue coevolution gave a readout of subunit architecture.

106 Although gene coevolution has been widely observed within individuals

107 e on species abundances depending on whether coevolution has conflicting or nonconflicting effects on

108 The quantitative study of gene-culture coevolution has focused in particular on the mechanisms

109 ed nature of CRISPR-dependent bacteria-virus coevolution has provided strong selection for the evolut

110 inference methods detecting residue-residue coevolution have recently triggered considerable progres

111 attern that involves the study of amino acid coevolution in an ensemble of sequences comprising a pro

112 n family, our joint EC analysis uses residue coevolution in both the target family and its related fa

113 Understanding the mechanisms enabling coevolution in complex mutualistic networks remains a ce

114 s a promising model of host-pathogen-culture coevolution in humans.

115 constitutes a crucial mechanism facilitating coevolution in multispecies plant-pollinator networks.

116 ion may have broader community consequences; coevolution in the chemostat altered the sensitivity of

117 We found that the predator slowed host-virus coevolution in the complex system and that the virus' ef

118 ntext, neutral genetic divergence and sexual coevolution in the correlated evolution of antagonistic

119 arn more about the nature of phage-bacterial coevolution in the environment.

120 s or more particularly, host/symbiont genome coevolution in the holobiont is only now being revealed.

121 Here we consider the role of plant-herbivore coevolution in the maintenance and characteristics of di

122 a DNA binding site and how their independent coevolution, in a stabilizing fitness landscape, of two

123 f sequence-specific sensing on host-pathogen coevolution, including endogenous sequences of foreign o

124 strength on one species benefits the other), coevolution increases the effects of climate change.

125 single-family EC analysis that uses residue coevolution information in only the target protein famil

126 s is unique in that it not only uses residue coevolution information in the target protein family, bu

127 luster-wide scale, integrating pairwise gene coevolution information with large-scale phylogenetic an

128 We consider a two-species model of coevolution involving one host and one parasite populati

129 Culture-led gene-culture coevolution is a framework within which substantive expl

130 This coevolution is consistent with the hypothesis that the e

131 The best evidence for invertebrate-virus coevolution is currently provided by large-effect polymo

132 theory suggests that the scope for perpetual coevolution is limited, if traits involved in IRSC are s

133 CAF, epigenetic changes dictate how stromal coevolution is mediated in tumors.

134 ary sequence, suggesting that intermolecular coevolution is not generally responsible for ERC between

135 positions suggest that structurally mediated coevolution is not the major driver of plastid-nuclear c

136 This coevolution is supported by the conservation of certain

137 cies, whereby a shared outcome of virus-host coevolution is the use of CXCR6 or other alternative cor

138 Because coevolution is ubiquitous in nature, our results support

139 Blastocystis research in the context of host coevolution, its potential as a biomarker of intestinal

140 Here we propose that coevolution leads to a dynamical trade-off.

141 Owing to a complex history of host-parasite coevolution, lentiviruses exhibit a high degree of speci

142 Thus, coevolution likely modulated disease risk, and the disru

143 Our model shows that coevolution maintains toxin diversity within populations

144 Through coevolution, mammals and these microbes have developed a

145 ve computational biologists as a resource of coevolution matrices, e.g., for developing machine learn

146 Finally, we show that pairwise virus-host coevolution may have broader community consequences; coe

147 y of protease-substrate interactions and how coevolution may restore substrate recognition and cleava

148 Here we investigate the coevolution mechanisms and dynamics between information

149 ding, the empirical research on the systemic coevolution mechanisms connecting these two spreading dy

150 Perhaps a hallmark of coevolution, milk provides a dramatic example of a diet

151 the requisite conditions of the antagonistic coevolution model of MHC evolution and providing quantif

152 utualism to organize and synthesize the ways coevolution modifies species interactions when climatic

153 ses total ecosystem biomass and promotes the coevolution of all cells in the ecosystem.

154 atile analysis and visualization of pairwise coevolution of amino acid residues.

155 infecting host microbiota, and experimental coevolution of bacteria and phage populations in the lab

156 Coevolution of beneficial microorganisms with the mammal

157 formation and growth of black holes and the coevolution of black holes and galaxies.

158 Thus, despite the coevolution of both functions, the active site of this p

159 ype II CRISPR-Cas groups to analyze possible coevolution of Cas9 and dual-RNA.

160 Our results are consistent with the coevolution of CENP-N and CENP-A and establish the struc

161 These results suggest the coevolution of clay minerals and early metabolites in ou

162 on of staying together, thereby studying the coevolution of clustering and cooperation.

163 tionary theory that describes the reciprocal coevolution of competing species.

164 e new insights into better understanding the coevolution of cooperation and phenotypic diversity.

165 e a statistically rigorous assessment of the coevolution of cultural tastes and social relationships;

166 Understanding the coevolution of deltaic channels and their flux organizat

167 ch dynamics, we propose a novel model of the coevolution of epidemic and awareness spreading processe

168 Based on these data, we suggest coevolution of epigenetic promoter elements during the e

169 Their model shows the coevolution of farming and farming-friendly property rig

170 The coevolution of female mate preferences and exaggerated m

171 This interdependence leads to the coevolution of flexible behaviors involved in parenting,

172 Coevolution of gammaherpesviruses with their hosts has r

173 These results suggest a possible coevolution of genes encoding physically-interacting pro

174 Our results suggest global coevolution of GPCRs and RAMPS and support the hypothesi

175 etypical mechanism, which may have supported coevolution of hemolysis and normal vascular function.

176 Coevolution of herpesviruses and their hosts has driven

177 Coevolution of herpesviruses with their respective host

178 an HIV-1 efficacy trial, and mapping of the coevolution of HIV-1 founder envelope mutants in infecte

179 ir evolutionary context to postulate how the coevolution of host and pathogen shaped the cellular ant

180 platform for digital evolution, we show that coevolution of hosts and parasites greatly increases org

181 The coevolution of hosts and their bacterial pathogens in th

182 Use of this methodology allows for coevolution of innovative technology within context cons

183 pecies interactome mapping demonstrates that coevolution of interacting proteins is remarkably preval

184 nism is yet another example of the exquisite coevolution of lambda with its host.

185 These data demonstrate that the coevolution of LHCPs and cpSRP43 occurred independently

186 ressures (Po2) is inextricably linked to the coevolution of life and Earth's biogeochemical cycles.

187 g sexual selection, sexual conflict, and the coevolution of male and female reproductive traits.

188 Coevolution of mammals with their microbiota has probabl

189 est possible benefits from understanding the coevolution of many kinds of dueling contagions.

190 Genetic evidence revealed species-specific coevolution of many NLRs with effectors from host-adapte

191 The data support the hypothesis that the coevolution of multiple mechanisms, including cuticular

192 he diversity and taxonomy of mycoviruses and coevolution of mycoviruses and their fungal hosts.

193 The coevolution of myxoma virus (MYXV) and wild European rab

194 The best-documented field example is the coevolution of myxoma virus (MYXV) in European rabbits.

195 s an important new dimension of the intimate coevolution of phage, host, and environment in the world

196 , and contribute to our understanding of the coevolution of plant-associated bacteria.

197 The coevolution of plants and microbes has shaped plant mech

198 nservation efforts in Maine, we describe the coevolution of pool conservation and research approaches

199 Our results indicate that the coevolution of PPI networks can form functional barriers

200 However, the coevolution of predator and prey traits has been shown t

201 oupling analysis, which detects residue pair coevolution of protein sequence composition.

202 icating extensive conservation and long-term coevolution of receptor-ligand pairs.

203 The coevolution of sand flies with Leishmania species of mam

204 y importance is a fundamental feature of the coevolution of sequence, structure and function.

205 Here, we mathematically model the coevolution of sex-specific helping and sex allocation,

206 Sexual conflict drives the coevolution of sexually antagonistic traits, such that a

207 y and multi-population dynamics to model the coevolution of social behavior and recognition.

208 freedom, in order to more fully capture the coevolution of societal wealth and freedom.

209 We study the coevolution of staying together and cooperation.

210 is, we construct a general framework for the coevolution of strategies and payoffs in arbitrary itera

211 ovides a general framework to understand the coevolution of strategies and payoffs in iterated intera

212 work thus provides a compelling view of the coevolution of surface states through a topological phas

213 However, further coevolution of the A and B types can perturb and eventua

214 lls in an experimental design that precluded coevolution of the cells with the virus.

215 d (iii) signatures of positive selection and coevolution of the extracellular network suggest reptile

216 There is no support for the adaptive coevolution of the Galpha:RGS protein pair based on sing

217 ingle amino acid substitution-based adaptive coevolution of the Galpha:RGS proteins was proposed to e

218 The coevolution of the OR repertoire and the olfactory syste

219 udy, we investigated the structural basis of coevolution of the p1-p6 cleavage site with the nelfinav

220 en the intein and its exteins, which implies coevolution of the parasitic intein and its host protein

221 and the host grass is presumed to align the coevolution of the species towards specialization and mu

222 unexpected fungal SRP diversity and suggest coevolution of the two most conserved SRP features-SRP R

223 distinct lineages and point to the possible coevolution of these loci, despite the lack of any known

224 Finally, sequence records reveal that the coevolution of these sites played an essential role in t

225 Coevolution of ticks and the vertebrate immune system ha

226 an ecomorphodynamic model that resolves the coevolution of topography and vegetation in response to

227 While coevolution of transporter associated with antigen proce

228 Of particular interest is the potential coevolution of two distinct parts of the genomes and our

229 by shared mechanisms highlights the possible coevolution of virus and host and could lead to the iden

230 Thus, despite long coevolution of virus and host effectors in the natural h

231 Coevolution of viruses and host defense systems is a key

232 throughout evolution by coordinated changes (coevolution) of network proteins.

233 tween the benefits and costs of cooperation, coevolution often leads to a dramatic loss of cooperatio

234 The resultant antagonistic coevolution often leads to extreme adaptations in both p

235 s of the effects of environmental change and coevolution on ecological communities.

236 ad to better understanding of the effects of coevolution on species adaptation.

237 ectron microscopy has revealed the effect of coevolution on the mitoribosome with the mitochondrial g

238 Hence, protease-substrate coevolution permits mutational, structural, and dynamic

239 Strong bacteria-virus pairwise coevolution persisted, despite strong protist-imposed se

240 lict has contrasting effects on antagonistic coevolution: Pleiotropic constraints stabilize the dynam

241 We explore the hypothesis that coevolution points to structurally conserved contacts at

242 mechanisms for Magnaporthe species, and this coevolution processes is greatly driven by directional s

243 approaches, Evol coanalyzes conservation and coevolution profiles extracted from multiple sequence al

244 Direct coupling analysis of nucleotide coevolution provides a novel approach to identify which

245 Recent developments have shown that residue coevolution provides accurate predictions of heterodimer

246 hozoan Acropora, indicative of host-symbiont coevolution, providing a resource for studying the molec

247 s is detrimental to the other), we show that coevolution reduces the effects of climate change, leadi

248 The residue coevolution reflects the physiological importance of the

249 Coevolution results in more convex (costly) trade-offs a

250 We show that coevolution's unique feedback between host and parasite

251 Coevolution sets up feedback loops that either dampen or

252 increasing nutrient availability resulted in coevolution shifting from FSD, with fluctuations in aver

253 couplings between IB-GGGG motifs matched the coevolution signal as well as contact couplings.

254 Yet, the significance of coevolution signals remains to be established.

255 oss-protection mutualism without a period of coevolution, suggesting that similar mutualisms may aris

256 al model of CRISPR-mediated prokaryote-phage coevolution that incorporates classical CRISPR kinetics

257 has allowed us to learn about the virus-host coevolution that prevents the damaging effects of the in

258 onistic relationships are thought to lead to coevolution, this is not always clear in virus-host inte

259 e major histocompatibility complex (MHC) and coevolution, three striking cases have been revealed in

260 gesting that they may be key in antagonistic coevolution to escape host suppression.

261 ed out an evolution experiment, allowing for coevolution to occur, with the entomopathogenic fungus,

262 thin the substrate envelope, likely enabling coevolution to sustain substrate recognition and cleavag

263 (NKT) cells, respectively, may result from a coevolution under particular selection pressures.

264 An in silico model of bacteria-phage coevolution verifies our predictions and demonstrates th

265 omo-oligomeric interfaces by tracing residue coevolution via the global statistical direct coupling a

266 As a consequence of their coevolution, viruses and host cells have established com

267 han one method at one site (residue 15), and coevolution was detected at two pairs of sites (residues

268 study the molecular basis for predator-prey coevolution, we investigated how Caenorhabditis elegans

269 ese intriguing features of MHC evolution and coevolution, we offer suggestions for future studies and

270 e molecular basis of this protease-substrate coevolution, we solved the crystal structures of drug re

271 tively, these results hint at intramolecular coevolution where the fold diverges differentially in th

272 ld come fast, but understanding gene-culture coevolution will be hampered by the measured pace of res

273 ants) that has undergone parallel functional coevolution with AtL.

274 origin of endophytic Epichloe species, their coevolution with host grasses and identification the gen

275 Such innovations must result from intimate coevolution with hosts, but a scarcity of definitive fos

276 specialized host cells, resulting from long coevolution with hosts.

277 Many microbes, during their coevolution with human subjects, developed mechanisms to

278 pesviruses, EBV has diversified through both coevolution with its host and genetic exchange between v

279 During coevolution with its hosts, PEDV has acquired mechanisms

280 d suggest that dental innovation rather than coevolution with major plant clades was a major driver i

281 PAMPs), and by the potential for 'arms race' coevolution with more rapidly evolving viral proteins.

282 ligand of NKp30, B7H6, shows strong signs of coevolution with NKp30 throughout evolution, i.e. coinci

283 y accomplished via convergent intramolecular coevolution with only modest architectural changes in le

284 ction and abortive infections operate during coevolution with phages, driving phages to much lower de

285 Prior to any subsequent coevolution with social learning, we suggest that aspect

286 tropism as a secondary trait selected during coevolution with specific animal species.

287 Host phylogeny, geographic isolation and coevolution with symbionts derived from very different s

288 nvestigating biogeography, breeding systems, coevolution with symbionts such as ants and fungi, funct

289 race with pathogen-derived inhibitors or by coevolution with the Cf-2 immune receptor detecting inhi

290 These findings underscore bacterial coevolution with the innate immune system, which has res

291 Through the long history of coevolution with their host plants, insects have develop

292 It is therefore not surprising that, during coevolution with their hosts, viruses have developed sop

293 atterns of positive selection that suggest a coevolution with viral pathogens.

294 ial when selection rapidly fluctuates during coevolution with virulent parasites ('the Red Queen Hypo

295 cause of perpetual intersexual antagonistic coevolution with wide-ranging evolutionary consequences.

296 ere distributed in 23 Gag-protease groups of coevolution, with the viral matrix and the capsid repres

297 effects, which is probably driven by genomic coevolution within lineages, might be an important sourc

298 t as directly interacting species in shaping coevolution within mutualistic assemblages.

299 We present evidence of coevolution within simple communities of Pseudomonas aer

300 dependent histories of sexually antagonistic coevolution within species and differences in reproducti