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1 n aerobically respiring Escherichia coli (E. coli).
2 increases the colistin MIC of laboratory E. coli.
3 sis factor and adherent-invasive Escherichia coli.
4 as a function of growth phase in Escherichia coli.
5 otic produced by some strains of Escherichia coli.
6 east by their 1:1 orthologs from Escherichia coli.
7 or GreA inhibits break repair in Escherichia coli.
8 ysine precursor is genetically encoded in E. coli.
9 rane and periplasmic proteins of Escherichia coli.
10 a, characterized by expansion of Escherichia coli.
11 n derived from enterohemorrhagic Escherichia coli.
12 of the AcrAB-TolC efflux pump in Escherichia coli.
13 ctase activity when expressed in Escherichia coli.
14 ture, and we implemented them in Escherichia coli.
15 d in the cross-linked motifs found within E. coli.
16 rebs cycle metabolite citrate in Escherichia coli.
17 ded DNA interference activity in Escherichia coli.
18 he O-antigenic polysaccharide of Escherichia coli 120, as its p-methoxyphenyl glycoside, have been ac
19 c features of bla KPC emergence in global E. coli, 2008-2013, using both long- and short-read whole-g
24 S. aureus and B. anthracis compared with E. coli Alveolar macrophages and CD14(+) cells were overall
27 al amino acid 5-hydroxytryptophan in both E. coli and eukaryotes, enabling efficient site-specific in
28 , which leads to overgrowth of indigenous E. coli and facilitates colonization by opportunistic patho
29 ted proteome-wide protein interactions in E. coli and HeLa cell lysates, respectively, identifying 1,
30 mechanisms of excision repair in Escherichia coli and humans and the recent genome-wide mapping of DN
31 beta-lactamase (ESBL)-producing Escherichia coli and K. pneumoniae isolates using MinION allowed suc
36 e phosphoprotein cofactor (P) in Escherichia coli and purified the resulting proteins by affinity and
37 ng elongation complexes (ECs) in Escherichia coli and Saccharomyces cerevisiae and found that 1-3% of
38 ncentrations in P. ruminicola 23, whereas E. coli and Salmonella spp. responses to excess nitrogen in
39 s of larvae after challenge with Escherichia coli and Staphylococcus aureus, but had no significant e
40 and mismatches occurs bi-directionally in E. coli and that, while all MutS-recognized mismatches had
42 stems support conjugative DNA transfer in E. coli and trigger P. aeruginosa T6SS killing, but not pil
43 onstituted robust blocks to both Escherichia coli and wheat germ extract translation systems, whereas
44 ndicator bacteria (FIB) Escherichia coli (E. coli) and Enterococcus spp. were enumerated using cultur
45 inhibited growth of model Gram-negative (E. coli) and Gram-positive (S. aureus) bacteria to a great
46 the abundance of FIB (Total coliforms and E. coli) and the Bacteroidales (HF183 marker) with bacteria
47 locase, EscV in enteropathogenic Escherichia coli, and cross it in strict hierarchical manner, for ex
48 s were successfully expressed in Escherichia coli, and eight of the nine candidates exhibited high-af
49 tin was efficiently expressed in Escherichia coli, and inhibitory assays demonstrated that it was a p
51 ating mutations of the adenomatous polyposis coli (APC) gene, whose product is an important component
52 ant for cell migration.Adenomatous polyposis coli (APC) regulates the localization of some mRNAs at c
53 unexpectedly, cyanobacteria and Escherichia coli appear to share an invariance principle to coordina
54 nnected network motifs, Escherichia coli (E. coli) appears to favor crosstalk wherein at least one of
56 n 73% against B. subtilis and 67% against E. coli as compared with that of control PVDF, while aged T
59 line on sensitive and resistant strains of E.coli, as well as effects of amphotericin-B and miconazol
60 systematic 11-yr hospital-based survey of E. coli associated with bacteremia using isolates collected
62 Using this method, we were able to detect E. coli at the concentration of approximately 10(5) CFU/mL
63 eptibility of metabolically active cells (E. coli, B. subtilis, Enterococcus, P. aeruginosa and Salmo
64 Importantly, it is also demonstrated that E. coli bacteremia initiated from translocation across the
65 aluminum foil on the UVC inactivation of E. coli bacteria and demonstrate a new radiation protection
66 tion, removal and destruction of Escherichia coli bacteria was developed onto the surface of Ag-ZnO b
73 te that ribocomputing devices in Escherichia coli can evaluate two-input logic with a dynamic range u
74 recombinant CrACX2 expressed in Escherichia coli catalyzed the oxidation of fatty acyl-CoAs into tra
75 /phagocytose Candida albicans or Escherichia coli cells both ex vivo and in vivo During systemic cand
77 SIM and STORM reconstructions of Escherichia coli cells harbouring CpcA-labelled cytochrome bd 1 ubiq
79 on of the polycation was observed to make E. coli cells more susceptible to other quaternary ammonium
81 ility and growth; and (6) ethanol-adapted E. coli cells restore the majority of these reduced activit
82 engineering, we study in living Escherichia coli cells the tripartite efflux complex CusCBA of the r
84 lecules in aggregated and single Escherichia coli cells, with approximately 300 nm spatial resolution
89 5 treatment reduced plasma LPS content in E. coli-challenged baboons, implying reduced complement-med
90 metalloenzymes revealed that it inhibits E. coli class II fructose bisphosphate aldolase, but not RN
91 was performed on 649 multidrug-resistant E. coli clinical isolates collected between 2011 and 2015.
94 gous expression of AfarsM1 in an Escherichia coli conferred resistance to MAs(III) but not As(III).
99 K d 11 nM) is comparable to that of the E. coli cysteine synthase complex (K d 6 nM), and both co
101 We screened Keio collection of Escherichia coli deletion mutants and revealed that deleting genes f
102 the RarA (also MgsA) protein of Escherichia coli, demonstrating that this protein functions at DNA e
103 tructured electrode by using specific anti-E.coli DNA aptamer (Kd 14nM), screened by new in-situ dev
104 is more akin to that observed in Escherichia coli dnaK mutants, rather than those in the Gram-positiv
105 ecay and a longer half-life compared with E. coli DSM1103 (6.64 +/- 0.63 h and 2.85 +/- 0.46 min vs 1
106 Fecal indicator bacteria (FIB) Escherichia coli (E. coli) and Enterococcus spp. were enumerated usi
107 arsely connected network motifs, Escherichia coli (E. coli) appears to favor crosstalk wherein at lea
108 s developed for the detection of Escherichia coli (E. coli) using the T7 bacteriophages engineered wi
113 with each other and with total coliforms, E. coli, enterococci, and biochemical oxygen demand (Kendal
114 this study, we initially observed that two E.coli enzymes, EcTSR and EcGCL, failed to be targeted int
115 We applied this strategy to two essential E. coli enzymes: the branched-chain aminotransferase BCAT a
116 ildren, typical enteropathogenic Escherichia coli (EPEC) is a common cause of diarrhea and is associa
117 henotypic variability in enteropathogenic E. coli (EPEC), an important human pathogen, both in virule
118 ative bacteria Escherichia coli, Escherichia coli (ESBL) (producing extended spectrum beta-lactamases
119 ainst the Gram-negative bacteria Escherichia coli, Escherichia coli (ESBL) (producing extended spectr
122 enterocolitica, enterotoxigenic Escherichia coli (ETEC), Vibrio, and Plesiomonas shigelloides The st
127 urce for future computational modeling of E. coli gene regulation, transcription, and translation.
130 The NhaA crystal structure of Escherichia coli has become the paradigm for this class of secondary
131 tion of carbapenem resistance in Escherichia coli has major implications for the management of common
134 periments show that the acidic tip of the E. coli Hfq CTD transiently binds the basic Sm core residue
136 -bound state, exemplified by the Escherichia coli Hsp70 DnaK, the interdomain linker is flexible.
137 o control their activity against Escherichia coli in both directions with light in the visible region
138 ned the prevalence of pathogenic Escherichia coli in poultry and poultry products; however, limited d
141 almost completely retained the pathogenic E. coli in the subsurface, suggesting that utilizing sand m
142 nhibit macrophage activation by nonviable E. coli In total, this study shows that cathelicidins do no
149 t with different timing, both FXa/PCPS and E coli infusion led to robust thrombin and plasmin generat
150 cholate siderophore expressed by Escherichia coli, inhibited PMA-induced generation of reactive oxyge
151 r of hydrogen peroxide in anoxic Escherichia coli Intriguingly, ccp transcription requires both the p
153 on in Pseudomonas sp. compared to that in E. coli is due to the dilution effect of different pathways
157 d optimisation of HBc particle yield from E. coli is required to improve laboratory-scale productivit
159 isolates, we sequenced 600 C. jejuni and C. coli isolates from various stages of poultry processing
162 tures of Bacillus licheniformis, Escherichia coli JM109, and Lactobacillus reuteri ATCC PTA 4659.
163 was more effective than PEf1 in infecting E. coli K-12 in pure cultures, PEf1 was 20-fold more effect
164 in suppressing a model enteric bacterium (E. coli K-12) in mixtures with soil bacteria (Pseudomonas p
165 ent DNA damage (SOS) response in Escherichia coli K-12, despite the fact that pressure cannot comprom
166 summarizes experimental data for Escherichia coli K-12, the best-studied bacterial model organism.
167 in animals colonized at P2 but not at P9, E. coli K1 bacteria gain access to the enterocyte surface i
170 (+)-dependent DNA ligase family (Escherichia coli LigA), captured as their respective Michaelis compl
171 inflammatory response induced by Escherichia coli lipopolysaccharide (LPS), a Toll-like receptor (TLR
172 ainst the spoilage food bacteria Escherichia coli, Listeria monocytogenes, Staphylococcus aureus and
176 olution, we obtained a mutant of Escherichia coli LS5218 with functional deletions of fadE and atoC t
178 J cm(-2) ) toward Gram-negative bacteria E. coli, making it a remarkably efficient optically mediate
179 metabolic engineering system in Escherichia coli Members of the TPS-c subfamily were characterized a
180 Predictive cysteine cross-linking in E. coli membranes and PELDOR measurements along the transpo
181 EcoCyc now supports running and modifying E. coli metabolic models directly on the EcoCyc website.
182 we show here for representative Escherichia coli mRNAs that 35%-50% of each transcript is diphospho
183 es tend to target modified DNA sites, and E. coli Mrr activity was previously shown to be elicited by
185 f omega and its role in assembly of RNAP, E. coli mutants lacking rpoZ (codes for omega) are viable d
186 ebsiella pneumoniae (n = 1,127), Escherichia coli (n = 149), and Enterobacter cloacae (n = 110).
187 ansporter CopA has been known in Escherichia coli, no gene for its chaperone had been identified.
188 chanistic and systemic levels in Escherichia coli Numerous important insights on DNA repair were obta
191 etection of the food contaminant Escherichia coli O157:H7 (E. coli O157:H7) in complex food products
195 ood contaminant Escherichia coli O157:H7 (E. coli O157:H7) in complex food products due to the recent
196 of integral membrane proteins in Escherichia coli often yields insufficient quantities of purifiable
198 middle of the beta barrel of the Escherichia coli OMPs OmpLA and EspP creates an energy barrier that
200 s decreased disinfection efficacy against E. coli on heavy-duty tarp but does prevent splashing, whic
201 we performed a genetic screen in Escherichia coli on the LCFA, oleate, and compared our results with
202 somerase and RNase H activity in Escherichia coli or Saccharomyces cerevisiae caused R-loop accumulat
203 n inactivated along with ExoI in Escherichia coli, or Sae2 in eukaryotes, palindromic amplifications
204 functional traits in N. meningitidis and E. coli Our study indicates that the expression of NMB0419
205 eria (Pseudomonas aeruginosa and Escherichia coli) over time through lag and log growth phases and fo
207 phagocytic uptake of bacterial (Escherichia coli) particles by (i) capturing along the filopodial sh
208 tudy quantifies the transport of Escherichia coli pathogenic O157:H7 and nonpathogenic K12 strains in
209 fects of membrane thickness, the Escherichia coli periplasmic chaperones Skp and SurA, and BamA, the
212 To contextualize ST131 within the broader E. coli population associated with disease, we used genomic
213 We modelled this scenario using Escherichia coli populations producing colicins, an antibiotic that
215 eveloped methodology was then applied for E. coli quantification in water samples using nanomaterial
216 OMCCs from the A. tumefaciens VirB/VirD4, E. coli R388 Trw, and Bordetella pertussis Ptl systems supp
217 n, without affecting host phagocytosis of E. coli RA101295 treatment reduced plasma LPS content in E.
218 rystal structures of full length Escherichia coli RapZ at 3.40 A and 3.25 A, and its isolated C-termi
219 differences in clustering between native E. coli receptors, with the TM sequence of better-clusterin
221 py (CoSMoS) to follow the exchange of the E. coli replicative DNA polymerase Pol IIIcore with the tra
222 providing the molecular basis for how the E. coli replisome can maintain high processivity and yet po
225 2.80; 95% CI, 1.65-4.74) and in Escherichia coli-resistant infections (OR, 2.28; 95% CI, 1.32-3.96).
226 ne (oxyBAC) present in this gene array in E. coli resulted in formation of BDMA from BACs at a rate o
227 Arg-213 as a crucial residue on Escherichia coli RF2 for discriminating guanine in the third positio
232 targets, including latex beads, Escherichia coli, Salmonella typhimurium, and Mycobacterium tubercul
233 1 K pneumoniae samples and 77 (19%) of 402 E coli samples were carbapenemase (KPC, NDM, OXA-48-like,
238 mary biosynthetic determinant of Escherichia coli size and present evidence supporting a similar role
239 in the in vivo environment of an Escherichia coli SSO, their development was based on structure-activ
240 lera toxin, or heat-stable enterotoxin of E. coli (STa toxin), with IC50 down to approximately 5 nM.
241 tize high-density populations of Escherichia coli, Staphylococcus aureus, and Mycobacterium smegmatis
243 wca operon caused a persistent-infection E. coli strain to become sensitive to complement-mediated k
245 Using a novobiocin-sensitive Escherichia coli strain with a leaky outer membrane, we identified a
247 c DNA from lambda bacteriophage, Escherichia coli (strain K12, MG1655) and Mus musculus (female BALB/
252 nterococci, fewer environmentally adapted E. coli strains were isolated on selective media containing
253 measured fitness of approximately 14,000 E. coli strains, each expressing a reporter gene with a uni
254 ition and statistical tools, to determine E. coli susceptibility within a few minutes to different an
255 has the potential to allow the versatile E. coli system to be employed as an exciting new carbon cap
257 te residue in the transmembrane region of E. coli TatC, which when modified by DCCD interferes with t
259 Here, we designed a genetic screen around E. coli that identified high-affinity cytochrome bd oxidase
260 al pathogens, including enterohemorrhagic E. coli The mechanisms that allow pathogens to target these
262 to produce hFGF21 efficiently in Escherichia coli, the expression and solubility of hFGF21 were teste
264 lutamate is the major monovalent anion in E. coli, these results suggest that SSB likely binds to ssD
265 tance 100-fold when expressed in Escherichia coli This qualifies ClpG as a potential persistence and
266 SrtA expression was achieved in Escherichia coli through molecular engineering, including manipulati
270 ructure of full-length ZntB from Escherichia coli together with the results of isothermal titration c
271 at the highly conserved Tyr-86 residue in E. coli TrmD is essential to discriminate between 3',5'-cAM
272 on of suppressor tRNA species in Escherichia coli; tRNAs with 8/4 or 9/3 structures efficiently inser
274 was 20-fold more effective in suppressing E. coli under simulated multispecies biofilm conditions bec
278 We detected escherichelin during clinical E. coli urinary tract infection (UTI) and experimental huma
279 lobacter species other than C. jejuni and C. coli using a filtration method and microaerobic conditio
280 y (11.9 kb encoding 10 genes) in Escherichia coli using a highly error-prone microchip-synthesized ol
281 duction of alpha-methyl acids in Escherichia coli using these enzymes allows the construction of micr
282 e T4 infects the bacterial host (Escherichia coli) using an efficient genomic delivery machine that i
283 ed for the detection of Escherichia coli (E. coli) using the T7 bacteriophages engineered with lacZ o
284 elve experimental populations of Escherichia coli, using whole-genome metagenomic sequencing at five
286 rescent protein (GFP)-expressing Escherichia coli was cultured onto PAR4-AP-modified titanium with an
289 nstituting bilin biosynthesis in Escherichia coli was modified to utilize HY2 from the streptophyte a
290 deoxyoctulosonate (Kdo)-lipid A domain in E. coli was necessary to facilitate chemical structure anal
291 y-forming units per mL of vaccine-serotype E coli was noted in the vaccine compared with the placebo
292 rica, Klebsiella pneumoniae, and Escherichia coli We compare patterns of selection operating on IGRs
293 sphatidylserine [PCPS]) vs LD100 Escherichia coli We found that, albeit with different timing, both F
294 ization of the MsrQ protein from Escherichia coli We optimized conditions for the overexpression and
295 tudies using Cryptosporidium and Escherichia coli, we show that failure to consider biphasic pathogen
296 ng a chemical genomics screen in Escherichia coli, we uncover a mode of action for DTPs-the disruptio
297 mplex that can also be formed in Escherichia coli when it is co-expressed with genes encoding PEB bio
298 nidase (beta-glucur) are both produced by E. coli, while beta-glucosidase (beta-gluco) is produced by
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