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1 (blank broth, Staphylococcus aureus, and E. coli).
2 st 5' to 3' RNA exonuclease identified in E. coli.
3 chors and Z-ring regulators described for E. coli.
4 ibutes to mutagenesis of S (p)-Me-PTEs in E. coli.
5 by which spacer orientation is defined in E. coli.
6 Azotobacter vinelandii NifEN in Escherichia coli.
7 ion-coupled repair in a manner similar to E. coli.
8 or mechanism of translational coupling in E. coli.
9 fecal shedding of ciprofloxacin-resistant E. coli.
10 colonization resistance against Escherichia coli.
11 antibacterial activity against wild-type E. coli.
12 r cell for exponentially growing Escherichia coli.
13 , by recombinantly expressing variants in E. coli.
14 as an alternative receptor when infecting E. coli.
15 cteristic of bacteria other than Escherichia coli.
16 gregated before cell division in Escherichia coli.
17 ycoside bacteriostasis and bactericide in E. coli.
18 cal prevalence of ciprofloxacin-resistant E. coli.
19 ibosome recycling on protein synthesis in E. coli.
20 e knob-into-hole and WT IgG4 molecules in E. coli.
21 the antimicrobial resistance of Escherichia coli.
22 em to treat carbapenem-resistant Escherichia coli.
23 t controls flagellar motility in Escherichia coli.
26 scopy (cryo-EM) structure of the Escherichia coli 50S subunit at an average resolution of 2.2 angstro
27 samples were frequently contaminated with E. coli (69%), and E. coli levels were the highest during t
30 ates a multitude of sequence ions for the E. coli ammonia channel (AmtB), provides improved localizat
31 ed with typical enteropathogenic Escherichia coli among children aged 6-11 months was 2.08 (95% CI 1.
32 en 15 diverse species (including Escherichia coli and 12 rhizobia) help identify the barriers that mu
34 , we test 243 candidate tRNAs in Escherichia coli and identify 71 orthogonal tRNAs, covering 16 isoac
35 an fragments (tri-diaminopimelic acid) in E. coli and in C. trachomatis These findings suggest that C
38 defines an antifolate stress response in E. coli and links its associated metabolites to a major imm
39 showed increased killing of phagocytosed E. coli and M. smegmatis Polyphosphate inhibited phagosome
40 (including carbapenem-resistant Escherichia coli and methicillin-resistant Staphylococcus aureus).
41 the fatty acid synthase (FAS) of Escherichia coli and paired that model with a fully reconstituted in
43 ], zymosan, mannan, and LPS from Escherichia coli and Salmonella as well as to the monosaccharides l-
48 s were produced recombinantly in Escherichia coli and used as antigens in phage display selections us
50 vation of Gram-negative Escherichia coli (E. coli) and Gram-positive Enterococcus durans (E. durans)
51 ion zone method against Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus), which decre
52 DIP) Human, Drosophila, Escherichia coli (E. coli), and Caenorhabditis elegans (C. elegan) datasets.
53 lopment of high-accumulating compounds in E. coli, and a general blueprint for the conversion of Gram
54 asmid was present in K. oxytoca, Escherichia coli, and Enterobacter cloacae isolates from unlinked pa
55 sor surface with polyclonal anti-Escherichia coli antibody allow to obtain high detection sensitivity
60 versely, in a vaginal colonization model, E. coli are detected inside vaginal cells and the urinary t
62 ntification and quantitative detection of E. coli are of great importance for bovine mastitis control
63 illus subtilis and Gram-negative Escherichia coli as model organisms to monitor bacterial concentrati
67 es, the M. tuberculosis Tam also replaced E. coli BioC both in vivo and in vitro and complemented bio
69 esults were interpreted according to CLSI E. coli breakpoints, with 49.0 to 85.8% considered suscepti
70 ppressed growth and colonisation by focal E. coli but also prevented it from evolving antibiotic resi
71 ly characterize gene repression in living E. coli by a collection of individual TALED loops with syst
72 enteric pathogen enterotoxigenic Escherichia coli by maternal natural IgG antibodies against the mate
77 antigen I (CFA/I) fimbriae from Escherichia coli can inhibit autoimmune diseases in murine models by
78 ulating petroleum-polluted sediments with E. coli carrying the vector pSF-OXB15-p450camfusion showed
80 of any redox indicators, allowed a single E. coli cell detection and from 1 to 4 x 10(4) CFU mL(-1) E
81 starved bacteria as a biological probe of E. coli cell function during nitrogen starvation, we demons
84 r pSF-OXB15-p450camfusion showed that the E. coli cells died after five days but a variety of bacteri
85 Global N-acetylome profiling of Escherichia coli cells expressing AtNAA50 revealed conservation of N
88 removes the [2Fe-2S] cluster from Fur in E. coli cells, suggesting that Fur senses the intracellular
89 asurements, we find that in live Escherichia coli cells, Zur's unbinding rate from DNA is sensitive t
94 e of transcripts that are Np(4)-capped in E. coli, clear evidence for Np(4) cap acquisition by Np(4)N
96 encoding aggregative adherence fimbriae, E. coli common pilus, flagellin and EAEC heat-stable entero
97 blished examples of multi-strain Escherichia coli communities with increasing complexity: uni-, bi-,
104 ted that 2,7-anhydro-Neu5Ac catabolism in E. coli depended on YjhC and on the predicted sialic acid t
105 In addition, deletion of TrkA in Escherichia coli depolarizes the cell, suggesting that the TrkH-TrkA
106 f an RNA-guided Cas9 nickase, an Escherichia coli-derived uracil DNA N-glycosylase (eUNG) and a rat A
107 edge, this level of sensitivity for whole E. coli detection is unprecedented in label-free biosensing
108 plied the Stabilized Peptide Evolution by E. coli Display technique to develop disrupters of the ther
109 d how frameshift-inducing stem-loops from E. coli dnaX mRNA and the gag-pol transcript of Human Immun
110 tes of unsaturation of lipids in Escherichia coli (E. coli) and Acinetobacter baumannii (A. baumannii
111 he inactivation of Gram-negative Escherichia coli (E. coli) and Gram-positive Enterococcus durans (E.
112 e inhibition zone method against Escherichia coli (E. coli) and Staphylococcus aureus (S. aureus), wh
113 entified 711 proteoforms from an Escherichia coli (E. coli) proteome consuming only nanograms of prot
115 Protein (DIP) Human, Drosophila, Escherichia coli (E. coli), and Caenorhabditis elegans (C. elegan) d
120 servations were analogous to how Escherichia coli encountering cell stress and nutrient deprivation c
121 s these challenges, we show that Escherichia coli Endonuclease V (eEndoV), an inosine-cleaving enzyme
126 porin (omp)-deficient strain of Escherichia coli expressing heterologous VcChiP could grow on M9 min
128 lex with the elongating KSs from Escherichia coli, FabF and FabB, in order to better understand the s
131 constrained by a large set of single-cell E. coli flagellar synthesis data from different strains and
132 eta-estradiol (E) for seven days, 50 ng/ml E.coli flagellin (F) for 12 h, or 4 nM 17beta-estradiol pl
134 died of organisms, the bacterium Escherichia coli, for ~65% of promoters we remain ignorant of their
136 ucibility and detection of potential ESBL E. coli from poultry cecal (n = 30) and water (n = 30) samp
137 ence identity, were expressed in Escherichia coli Functional characterization of the purified recombi
139 In this work, we express the Escherichia coli gene mreB inside vesicles with bilayers made of lip
140 onarily conserved rare codons in Escherichia coli genes and associated such codons with cotranslation
142 compared to control in both germ-free or E. coli gut microbiota states was used to quantitate pathwa
144 escribe an elegant strategy that Escherichia coli has evolved to minimize metabolic stress that resul
146 d, because MK and DMK are also present in E. coli Here, we established that UQ(9) is the major quinon
147 ent the crystal structure of the Escherichia coli Hfq Core bound to a 30 bp DNA, containing three 6 b
148 es not confer antimicrobial resistance in E. coli, highlighting the importance of verifying protein p
150 p)-tagged AR plasmid (pRP4-gfp) within an E. coli host (EcoFJ1) in the liquid phase and biofilms in b
152 P2 OLD-mediated killing of recBC-Escherichia coli hosts, indicating that both the ATPase and nuclease
153 and the Gram-negative bacterium Escherichia coli However, the physiological roles of TCP96 in contro
154 ontributes to gene expression in Escherichia coli In addition, Q8 was proposed to confer bacterial os
155 lence of ciprofloxacin-resistant Escherichia coli in cattle and to determine if removal of invasive b
157 the mcr-1 gene was discovered in Escherichia coli in domestic swine in China that conferred resistanc
158 uman FMRP, FXR1P, and FXR2P from Escherichia coli in high yields, free of protein and nucleic acid co
159 K. michiganensis generally outcompeted E. coli in vitro, but in vivo administration of galactitol-
160 e-examined the experimental parameters of E. coli in-cell NMR and found that the detectability and re
162 eclinical model of uropathogenic Escherichia coli-induced acute pyelonephritis to determine the contr
163 ted that adenosine or ATPgammaS mitigates E. coli-induced ALI in mice and may be useful as an adjuvan
164 effectiveness of antibiotic treatment in E. coli-induced myositis and a clinically relevant S. aureu
165 ce demonstrated baseline translocation of E. coli into the liver and spleen and were more susceptible
174 2S] cluster in Fur protein is ~31% in the E. coli iscA/sufA mutant cells and is decreased to ~4% in W
175 also found that 12.8% of broiler chicken E. coli isolates and 7.61% of layer chicken isolates carrie
178 nt manner has been discovered recently in E. coli Its physiological relevance is not yet understood,
180 cus elongatus with heterotrophic Escherichia coli K-12, Escherichia coli W, Yarrowia lipolytica, or B
182 enzymes (almA, xylE, p450cam) in Escherichia coli led to degradation of 60-99% of target hydrocarbon
183 ntly contaminated with E. coli (69%), and E. coli levels were the highest during the wet season.
184 tor-alpha (TNF-alpha), IL-1beta, Escherichia coli lipopolysaccharide (Ec-LPS) and Porphyromonas gingi
189 ographic studies have shown that Escherichia coli McrB uses a base-flipping mechanism to recognize th
190 In the Gram-negative bacterium Escherichia coli, membrane-bound sensor CusS and its response regula
191 determine cryo-EM structures of Escherichia coli MlaFEDB in an apo state and bound to phospholipid,
192 ions of proteomes extracted from Escherichia coli, mouse embryonic fibroblast cell cultures, and Arab
193 ored for C. crescentus MreB over Escherichia coli MreB because of a closer match in the degree of ope
194 nslation initiation step of many Escherichia coli mRNAs, particularly those with weak Shine-Dalgarno
196 Klebsiella pneumoniae (n = 236), Escherichia coli (n = 22), Enterobacter cloacae (n = 23), Klebsiella
198 ze new niches, interrogation of sequenced E. coli O157:H7 genomes showed a high level of CycA conserv
201 sical bacteriophages that infect Escherichia coli or Salmonella, yet, less is known about the packagi
203 ion and puncture or infection by Escherichia coli or Streptococcus pneumoniae) and endotoxaemia.
207 aggregative Escherichia coli (EAEC) is an E. coli pathotype associated with diarrhea and growth falte
208 ycan precursors and fragments by Escherichia coli PBP1B, allowing us to (a) identify recognition elem
209 mpounds directly for stimulating Escherichia coli persister cell resuscitation, we identified that 2-
211 trand-breaks in purified DNA from Eschericia coli, phosphorothioate epigenetics in Salmonella enteric
213 n citrate (Cit(+)) evolved in an Escherichia coli population during adaptation to a minimal glucose m
216 olonization with curli-producing Escherichia coli promotes alphaSyn pathology in the gut and the brai
217 the discrimination between RNA ligands by E. coli ProQ and Hfq depends both on positive determinants
218 bead' approach, we reconstituted Escherichia coli proteins MsbA and MscS and find that peptidiscs sta
220 711 proteoforms from an Escherichia coli (E. coli) proteome consuming only nanograms of proteins.
221 s, including the human pathogens Escherichia coli, Pseudomonas aeruginosa, and Vibrio cholerae, and t
222 in-one' vector was functional in Escherichia coli, Pseudomonas syringae and Klebsiella pneumoniae, an
226 t both the efficiency with which Escherichia coli RNA polymerase incorporates dinucleoside polyphosph
227 e seven intermediates containing Escherichia coli RNAP with the transcription factor TraR en route to
228 ate translesion RNA synthesis by Escherichia coli RNAP without altering the fidelity of nucleotide in
231 he highest antimicrobial activity against E. coli, S. aureus, and S. typhi in in vitro antimicrobial
234 ased chromosome occupancy of the Escherichia coli SMC complex, MukBEF, the chromosome is organized as
236 ry profile accounted for reduced Escherichia coli-specific responses in aged MAIT cells compared with
241 at commensal bacteria, including Escherichia coli, stimulated HDAC activity through metabolism of phy
243 TI is often caused by a virulent Escherichia coli strain, whereas recurrent infections and asymptomat
244 was nearly eliminated in a ClpB-deficient E. coli strain, which demonstrates a significant selectivit
245 control strains and (ii) 288 human-source E. coli strains classified by PCR as ExPEC and non-ExPEC.
246 ry of recombinant non-pathogenic Escherichia coli strains was engineered to express seven potential C
247 tibiotic dose-response curves of Escherichia coli strains, and previous observations on antibiotic re
251 ance capacity of K. michiganensis against E. coli, supporting the idea that nutrient competition is t
252 ata show that endogenous DNA gap repair in E coli supports efficient multiplex site-directed mutagene
255 gradients with narrow temperature ranges, E. coli tended to aggregate near a sidewall of the gradient
256 microbial community with three strains of E. coli that cyclically interact through (i) the inhibition
258 n derived from enterohemorrhagic Escherichia coli that is tolerant to a wide range of glycoforms.
259 inD is a cell division ATPase in Escherichia coli that oscillates from pole to pole and regulates the
260 s using metabolically engineered Escherichia coli The pretreatment step achieved an almost 100% recov
261 are readily colonized with mcr-1 positive E. coli, their shedding patterns, transmission among conspe
262 tial adaptive response to N starvation in E. coli These results serve as a paradigm to demonstrate th
264 bacteria could obtain these vectors from E. coli through several mechanisms of horizontal gene trans
265 We show utilization hierarchy of Escherichia coli to be ordered by the carbon-uptake flux rather than
266 ed species and R1-R2 octamers in Escherichia coli To better understand the distribution of different
268 facilitate transmission of mcr-1 positive E. coli to humans and livestock through fecal contamination
271 nutrient that supports the growth of only E. coli-to bi-colonized gnotobiotic mice abolished the colo
272 ntly characterised a low-activity form of E. coli transketolase, TK(low), which also binds the cofact
273 emonstrates remarkable versatility of the E. coli translational machinery for initiation with ncAAs i
274 xidation-induced abasic sites in DNA from E. coli treated with a sublethal dose of hydrogen peroxide.
276 h a heterologous TPS (OtsA) from Escherichia coli, under the control of the TPS1 promoter, and tested
277 d by Gram-negative uropathogenic Escherichia coli (UPEC) or Gram-positive Enterococcus faecalis, we u
281 which possesses homologs of the Escherichia coli uvrA, uvrB, and uvrC genes, removes cyclobutane pyr
287 to in vivo metatranscriptomic data where E. coli was present at high abundances, and found that our
288 nosa, Staphylococcus aureus, and Escherichia coli We have previously demonstrated that sphingosine is
289 ross-links into the cell wall of Escherichia coli, we generated a bacterium where up to 31% of the ce
291 ngly, we find that in B. subtilis, unlike E. coli where multiple enzymes have a biochemical activity
292 lA potentiated carbapenem efficacy in CRE E. coli, whereas inhibition of the genes flhC and ygaC conf
295 ice using an engineered genetic circuit in E.coli, which responded to microgravity by changing the ex
296 ves multiplex editing by 5- to 10-fold in E. coli, while PapRecT enables efficient recombineering in
298 imentally evolved populations of Escherichia coli with genetically perturbed TMs for 1,000 generation
300 a species are close relatives of Escherichia coli, yet relatively few previously described phages app