ライフサイエンスコーパス: colinearity

1 detection and evolutionary analysis of gene colinearity.

2 ed to be expressed with temporal and spatial colinearity.

3 ; a pattern that apparently violates spatial colinearity.

4 ticeae genome that do not perturb chromosome colinearity.

5 hanism(s) responsible for the maintenance of colinearity.

6 computing a scaffold ordering that maximizes colinearity across a collection of maps.

7 The method documents colinearity among 24 pairs of maize chromosomes, suggest

8 Altogether, the complex pattern of colinearity among maize chromosomes suggests that curren

9 data, identifiability of parameters using a colinearity analysis, and suitability of the model size

10 ic region, LSDV genes share a high degree of colinearity and amino acid identity (average of 65%) wit

11 PV and lepidopteran genus B EPVs lack genome colinearity and exhibit a low level of amino acid identi

12 omology are based on shared-gene density and colinearity and possibly also strand information.

13 ior identity follows general rules: temporal colinearity and posterior prevalence.

14 A strong genome colinearity and sequence homology were observed between

15 here homologous genes share a high degree of colinearity and their proteins share a high level of ami

16 ation of gene content and order (synteny and colinearity) and in the extension of genomic information

17 Although gene colinearity appears to be retained, four out of six gene

18 apparent intraspecific violation of genetic colinearity arises from the movement of genes or gene fr

19 y, we improve a preexisting method that used colinearity as the basis for statistical tests.

20 Sh2/A1 region, suggesting that the break in colinearity as well as X1 duplications and genome expans

21 utational efficiency and a relaxation of the colinearity assumption.

22 tial least squares regression to account for colinearity between air pollutants.

23 t for the statistical significance of marker colinearity between chromosomes, and the application of

24 ce providing synteny information in terms of colinearity between chromosomes.

25 ative mapping revealed extensive synteny and colinearity between genomes of the Pinaceae, consistent

26 However, the analysis of gene colinearity between P. trifoliata and Arabidopsis indica

27 completely eliminated, suggesting a lack of colinearity between S. lycopersicoides and L. esculentum

28 The colinearity between the activities of modular PKS domain

29 This requires the existence of colinearity between the Arabidopsis and cereal genomes,

30 There was no long range colinearity between the E. coli and H. influenzae gene o

31 cated in the chromosome, suggesting that the colinearity between the gene expression and gene arrange

32 Extensive orthology and nucleotide colinearity between the genomes of A. tumefaciens and th

33 o pachytene chromosome 6 revealed an overall colinearity between the two chromosomes.

34 rows with the degree and pattern of synteny/colinearity between the two linkage groups manifested in

35 se regions can be based on either synteny or colinearity, but there are few methods to test statistic

36 ponse, our analyses suggest a lack of strict colinearity for several genes in the HoxA and HoxB clust

37 Large regions of genomic colinearity have been demonstrated among grass species b

38 onstraints have maintained a requirement for colinearity in genomic organization.

39 vation of Homeotic (Hox) gene clustering and colinearity in many metazoans indicates that functional

40 sis and may explain examples of apparent non-colinearity in other modular PKS systems.

41 mplex, Hoxb-13 exhibits temporal and spatial colinearity in the main body axis of the mouse embryo.

42 Gene colinearity in the region is well conserved within the g

43 Temporal colinearity in the sequence of their activation is obser

44 Within the terminal 13 kbp, colinearity is disrupted and multiple poxvirus gene homo

45 In the terminal regions, colinearity is disrupted and poxvirus homologues are eit

46 gene pairs difficult to identify and because colinearity is expected to be low with greater time sinc

47 ifers, which include all the Brassica crops, colinearity looks good enough to do most map-based cloni

48 ve upon these analyses, we searched for gene colinearity (microsynteny) between Arabidopsis and rice

49 Despite this tendency for colinearity, microtubules have been seen to branch off e

50 These micro-colinearity modifications possibly are responsible for d

51 s and translocations of genes, interrupt the colinearity observed throughout the S. parvula and Arabi

52 rghum (Sorghum bicolor) genomes, retain gene colinearity of 50% and 71%, respectively, and 70% and 10

53 Colinearity of a large region from barley (Hordeum vulga

54 omes) promote short-range compaction and the colinearity of chromosomal arms, respectively.

55 Its authenticity was confirmed by colinearity of deduced amino acid sequences with the pep

56 Within genomic regions where micro-colinearity of genes is absolutely conserved, gene-islan

57 Colinearity of genes was observed with the KSHV genome,

58 tes the general rule of spatial and temporal colinearity of Hox gene expression with gene order along

59 teriophage lambda and tried to establish the colinearity of its linkage map with its DNA molecule.

60 Restriction mapping and FISH confirmed the colinearity of the contig with the genomic restriction m

61 Colinearity of the half-YAC with the telomeric human gen

62 The extensive colinearity of the MDV genome with those of related herp

63 To assess division plane specification, the colinearity of the nuclear and growth axes was uncoupled

64 Colinearity of these four genes is not conserved in Arab

65 ynteny of the CpCYC-b region is indicated by colinearity of two to four genes between papaya, Arabido

66 130 putative genes, respectively, and share colinearity over 127 genes, 88 of which are conserved in

67 igh level of divergence and poorly conserved colinearity, particularly near the Tg-B1 locus.

68 ox genes and the molecular function of their colinearity remain unknown.

69 A detailed study of the colinearity remaining between two small regions of Arabi

70 fully exploit the observation that relaxing colinearity requirements in general is beneficial for ho

71 idence of paracentric inversions and limited colinearity suggests that locating genes in one anopheli

72 There was <4% sequence colinearity surrounding the watermelon and cucumber atp9

73 atabase takes advantage of the known genetic colinearity (synteny) between rice and the major crop pl

74 Good overall colinearity was observed among the three homoeologous gr

75 Statistically significant colinearity was observed between low-copy-number ESTs fr

76 e genes with trypanosomatid homologs, strict colinearity was rarely observed because gene order was r

77 rupted synteny or significant disruptions in colinearity were not detected.

78 Two chromosomes maintained colinearity, whereas the remaining were highly rearrange

79 ose of other ChPVs revealed extensive genome colinearity which is interrupted in FPV by a translocati

80 s genomes, it is unlikely that the extent of colinearity will be sufficient to allow map-based cross-

81 er IVs, including IIV-6; the lack of obvious colinearity with any sequenced IV; the low levels of ami

82 ally mapped in maize, revealing a stretch of colinearity with maize chromosome 4.

83 lly, distantly related O. brachyantha shares colinearity with O. sativa, offering opportunities to us

84 p), diploid genetics, diverse germplasm, and colinearity with other C4 grass genomes.

85 The decay of colinearity with other grass genomes correlates with rec

86 mine patterns of duplication, and assess the colinearity with rice of ESTs assigned to the group 2 co

87 a sativa), nonshared genes violate the maize colinearity with rice.

88 he physical map of T. monococcum had perfect colinearity with the genetic map of wheat chromosome arm

89 f this clone revealed extensive homology and colinearity with the right end of the herpesvirus saimir

90 NAs from the iab control regions demonstrate colinearity with the sequence of the iab regions along t

91 ealed that, because of extensive senteny and colinearity within linkage groups that make up the chrom

92 ains 14 unique genes which disrupt ChPV gene colinearity within the central genomic region, including