ライフサイエンスコーパス: comparative genomics

1 ng plant Ca accumulation using genetical and comparative genomics.

2 our understanding of functional genomics and comparative genomics.

3 model clade for the study of functional and comparative genomics.

4 s among genes across different species using comparative genomics.

5 lotype and structural variation analysis and comparative genomics.

6 acterial genomes, that were reconstructed by comparative genomics.

7 is combined with whole-genome sequencing and comparative genomics.

8 s were examined by computational analysis of comparative genomics.

9 olecular engineering for optogenetics and by comparative genomics.

10 in multiple genomes is a fundamental task in comparative genomics.

11 ogically the rapidly expanding strategies in comparative genomics.

12 Orthology analysis is a fundamental tool in comparative genomics.

13 sis of urogenital schistosomiasis (UGS): (1) comparative genomics, (2) the development of functional

14 Our approach shows that comparative genomics across natural isolates can quickly

15 hybridized onto a D. mccartyi microarray for comparative genomics against four sequenced strains.

16 Comparative genomics allows researchers to combine genom

17 Metabolic reconstruction and comparative genomics among assemblies show that these po

18 Rapid progress in comparative genomics among the grasses has revealed simi

19 Y Chromosomes of sufficient quality for most comparative genomics analyses and for conservation genet

20 junction with high-throughput sequencing for comparative genomics analyses and studies of genome evol

21 Comparative genomics analyses executed by powerful compu

22 Comparative genomics analyses indicate that this family

23 ion of its members, phylogenetic and several comparative genomics analyses were performed.

24 Comparative genomics analyses with uncultivated environm

25 long-standing practice of manual curation in comparative genomics analyses.

26 Here we performed a systematic comparative genomics analysis of human disease-causing m

27 The comparative genomics analysis of strain ZYK(T) implies t

28 This comparative genomics analysis suggests a high degree of

29 Comparative genomics analysis suggests the presence of a

30 Comparative genomics analysis unravels lineage-specific

31 Comparative genomics analysis was carried out among zoys

32 In this study, a comparative genomics analysis was performed to identify

33 models for each related organism used in the comparative genomics analysis.

34 illance metadata and novel data derived from comparative genomics analysis.

35 based on SLAF-seq and used them to perform a comparative genomics analysis.

36 ajor categories: (i) organisms, genomes, and comparative genomics and (ii) recurrent integration of c

37 sessment, comparisons and clustering), (iii) comparative genomics and (iv) analysis of regulatory var

38 Integrating comparative genomics and analyses of gene expression yie

39 ome sequencing and were investigated through comparative genomics and Bayesian coalescent analysis.

40 Comparative genomics and biochemical analysis of ASAT en

41 , we investigate the functions of APeg3 with comparative genomics and cell line-based functional appr

42 3-way networks, illustrate their utility in comparative genomics and demonstrate how they find relat

43 undamental molecular resource for vertebrate comparative genomics and embryogenesis studies.

44 esources across an order greatly facilitates comparative genomics and enhances our understanding of t

45 combination with other approaches, including comparative genomics and environmental field work, labor

46 ively, our results provide the most complete comparative genomics and experimental analysis of mRBPs

47 The comparative genomics and experimental study, presented h

48 Our comparative genomics and expression data reshape our vie

49 ve data archives, which enable sophisticated comparative genomics and functional analysis of fungal p

50 Applying a combination of RNAseq, comparative genomics and functional experiments, we iden

51 overage can be useful for genome annotation, comparative genomics and functional studies.

52 hods used include creating congenic strains, comparative genomics and gene expression analysis.

53 the power of second-generation sequencing in comparative genomics and greatly expand the repertoire o

54 r groups should facilitate future studies on comparative genomics and identification of genes that co

55 Using comparative genomics and improved computational methods,

56 ity scores), isolates were investigated with comparative genomics and in animal models.

57 S ribozyme, that has been identified through comparative genomics and is believed to be a metalloribo

58 Comparative genomics and linkage analysis identify candi

59 Seeking to facilitate comparative genomics and machine-learning analyses of re

60 genetic dissection of rubber related traits, comparative genomics and marker-assisted selection for t

61 of potential applications in paleogenomics, comparative genomics and metagenomics.

62 Here, using comparative genomics and microscopy, we show that a thre

63 Here, using a combination of comparative genomics and molecular clock analyses, we sh

64 Here, using comparative genomics and molecular genetic approaches, w

65 Using genome sequencing, comparative genomics and mutagenesis, we defined new gen

66 as been extended with additional support for comparative genomics and ontology information.

67 In this study, comparative genomics and phenotypic analysis were used t

68 We analyze inter- and intraspecific plastid comparative genomics and phylogenomic relationships with

69 uctan biosynthetic genes were isolated using comparative genomics and physical mapping followed by BA

70 Initial comparative genomics and physiological studies have reve

71 or genome information promises to facilitate comparative genomics and provide a scaffold for ordering

72 The rise of comparative genomics and related technologies has added

73 portant for cold activity were identified by comparative genomics and substituted with evolutionarily

74 Whole-genome sequencing, comparative genomics and systems biology are generating

75 Comparative genomics and theoretical predictions of some

76 is study provides an unexpected link between comparative genomics and topology, and demonstrates adva

77 In this study, we used comparative genomics and transcriptome analysis of citra

78 resent LegumeIP, an integrative database for comparative genomics and transcriptomics of model legume

79 both strains by more than 5-log10 in <24 h, comparative genomics and transcriptomics revealed differ

80 m 43 plant species using both computational (comparative genomics) and experimental (direct cloning a

81 proved our resources for gene regulation and comparative genomics, and added CRISPR/Cas9 target sites

82 ne clusters identified by genome sequencing, comparative genomics, and chemical analysis in four plan

83 ing taxonomic validation, genome annotation, comparative genomics, and clinical testing.

84 Transcriptional profiling, comparative genomics, and culture-based assays revealed

85 h the plurality signal is a frequent task in comparative genomics, and especially in phylogenomic ana

86 l, we undertook complementary computational, comparative genomics, and experimental approaches to ide

87 d, making it also an important reference for comparative genomics, and for studies of myriapod physio

88 ulosis A combination of population genetics, comparative genomics, and investigations of Yersinia-fle

89 cember 2013 (GRCh38, UCSC hg38), a watershed comparative genomics annotation (100-species multiple al

90 r of innate immunity signaling validates the comparative genomics approach for innate immunity gene d

91 We applied the comparative genomics approach implemented in the RegPred

92 We used a comparative genomics approach to determine whether share

93 rmorant species and applied a predictive and comparative genomics approach to find candidate variants

94 We report here the use of a comparative genomics approach to identify seven candidat

95 We utilized the comparative genomics approach to infer candidate Rex-bin

96 Here, we have taken a comparative genomics approach to interrogate the differe

97 We used a comparative genomics approach to investigate the evoluti

98 In the current work, we applied a comparative genomics approach to predict DNA-binding sit

99 We used a comparative genomics approach to reconstruct the N-acety

100 To address this, we took a comparative genomics approach to study AUG and non-AUG u

101 Using a comparative genomics approach with four dicotyledonous p

102 A comparative genomics approach, facilitated by the recent

103 Using a comparative genomics approach, we identified DNA motifs

104 Using a comparative genomics approach, we show that nature also

105 ion and analysis of microbial regulons using comparative genomics approach.

106 We used the knowledge-driven comparative-genomics approach implemented in the RegPred

107 In this study, comparative genomics approaches and the results of gene

108 However, comparative genomics approaches are limited to syntenic

109 nd genome evolution studies using visualized comparative genomics approaches in Brassicaceae species.

110 As a complement to genetic and comparative genomics approaches, the Encyclopedia of DNA

111 This has been driven primarily by comparative genomics approaches, which rely on accurate

112 cation of TF regulons is mostly done through comparative genomics approaches.

113 lopments in high-throughput technologies and comparative genomics are shedding light on the evolution

114 ) was recently identified in archaea through comparative genomics as being involved in methanopterin

115 y, riboswitches have been identified through comparative genomics based on sequence and structural ho

116 Our VISTA family of tools for comparative genomics, based on algorithms for pairwise a

117 tigs is primarily based on recombination and comparative genomics-based approaches.

118 ome includes 212 genes not found in previous comparative genomics-based core proteome definitions, ac

119 nimal gene lists have been proposed by using comparative genomics-based core proteome definitions.

120 This distribution allows for comparative genomics-based investigations.

121 whole genome level in C. reinhardtii using a comparative genomics-based method.

122 This comparative-genomics-based approach to the development o

123 erminants, virologists traditionally utilize comparative genomics between a virulent and an avirulent

124 Comparative genomics between early and later isolates ob

125 Non-B DB v2.0 extends the ability for comparative genomics by including re-annotation of the f

126 AspGD facilitates comparative genomics by providing a full-featured genomi

127 we demonstrate how intragenus and intergenus comparative genomics can be used to drive these investig

128 l behavior, thus providing an example of how comparative genomics can be used to test sociobiological

129 hromatin organization have diverged and that comparative genomics can help discover new determinants

130 Comparative genomics can leverage the vast amount of ava

131 dopsis have microbial homologs-cross-kingdom comparative genomics can powerfully complement plant-bas

132 Comparative genomics cluster analyses revealed novel gen

133 Data mining methods in bioinformatics and comparative genomics commonly rely on working definition

134 serves as a valuable resource for the plant comparative genomics community.

135 Comparative genomics complements genetic and biochemical

136 Comparative genomics contrasting the putative environmen

137 tabase for performing visualized analyses of comparative genomics data in Brassicaceae (crucifer) pla

138 Comparative genomics data indicate that these loci, and

139 The recent explosion of comparative genomics data presents an unprecedented oppo

140 ating large-scale TRN models that integrates comparative genomics data, global gene expression analys

141 t exploits a matrix of pie charts to display comparative genomics data.

142 uce a software system for visual analysis of comparative genomics data.

143 Here, we present a comparative genomics database named PIECE for Plant Intr

144 Comparative genomics datasets tend to be large and compl

145 The objective of this study was to use comparative genomics datasets to find unique target regi

146 Comparative genomics delineated 12 phage groups that (i)

147 Comparative genomics demonstrate conservation of glycine

148 rily, structure-based phylogenies coupled to comparative genomics demonstrate that plant DHNA-CoA thi

149 Comparative genomics elucidated evolutionary aspects, an

150 The draft genome will aid in comparative genomics, epidemiological studies, and quara

151 Interpretation of comparative genomics evidence suggests unexpected (nonba

152 We previously used comparative genomics evidence to recognize protein-codin

153 CNEs identified by comparative genomics exhibit dynamic regulatory activity

154 er and its web server will contribute to the comparative genomics field by facilitating the study of

155 Comparative genomics for S. haematobium is feasible, giv

156 Data visualization can play a key role in comparative genomics, for example, underpinning the inve

157 Comparative genomics found 2,796 bat-accelerated regions

158 Here, we develop a general comparative genomics framework to align isolated genomes

159 Comparative genomics from mitochondria, plastids, and mu

160 Comparative genomics has been a powerful tool for the di

161 luating their genome-wide occurrence through comparative genomics has consistently been plagued by hi

162 Comparative genomics has correctly predicted functions f

163 Comparative genomics has revealed a class of non-protein

164 Comparative genomics has suggested that the Orthopoxviru

165 While comparative genomics has uncovered how some of these evo

166 Two new features for data analysis and comparative genomics have been added to the site.

167 Comparative genomics heavily relies on alignments of lar

168 Guided by comparative genomics, here we reverse-engineered a fluor

169 Comparative genomics identifies a distant exosortase hom

170 Our comparative genomics identify that while plant biomass d

171 Comparative genomics illuminated the origin of Z-ISO fou

172 f marker development, map-based cloning, and comparative genomics in barley and related crops.

173 web server is a visualization tool allowing comparative genomics in four different phyla (Vertebrate

174 ficant advance in functional, structural and comparative genomics, in diagnostics, gene replacement,

175 Comparative genomics, including the de novo genome seque

176 Comparative genomics indicates the fumagillin/pseurotin

177 Currently, there is limited comparative genomics insight into the evolution of dieta

178 alysis of complex crop genomes combined with comparative genomics is a powerful technique for novel g

179 ated that whole-genome sequencing along with comparative genomics is an effective approach for discov

180 ng, the availability of genomic sequence for comparative genomics is increasing exponentially.

181 te on insights into bacterial evolution from comparative genomics is provided in this review.

182 Comparative genomics is providing a mechanism to assess

183 s in an evolutionary context, as well as how comparative genomics is providing new insights into the

184 Comparative genomics is providing new opportunities to a

185 One of the outstanding challenges in comparative genomics is to interpret the evolutionary im

186 ment, which is of fundamental importance for comparative genomics, is a difficult problem and error-p

187 the Coulson plot format is highly useful in comparative genomics, its original purpose, the software

188 We present PhyloCSF, a novel comparative genomics method that analyzes a multispecies

189 Although such comparative genomics methods have proven useful in disco

190 Powerful comparative genomics methods, such as phylogenetic footp

191 Leveraging comparative genomics methods, we identify and experiment

192 Using comparative genomics methods, we predict that a family o

193 NCODE project, an improved higher-resolution comparative genomics metric for detecting protein-coding

194 ur interdisciplinary approach, incorporating comparative genomics, mutagenesis, enzyme kinetics, and

195 We used comparative genomics of 224 temporal and spatial diverse

196 Comparative genomics of 70 total EPEC from lethal (LI),

197 Comparative genomics of cellulolytic clostridia will pro

198 ults highlight the advantages of integrating comparative genomics of closely related organisms with g

199 We discuss the comparative genomics of different cancers, including mut

200 egrated resource for storage, annotation and comparative genomics of helminth genomes to aid in learn

201 Comparative genomics of modern isolates suggests that M.

202 We have performed comparative genomics of prevalent GBS serotypes of India

203 ype 17 was important as a reference tool for comparative genomics of recently isolated HAdV pathogens

204 Comparative genomics of Salmonella Typhimurium will prov

205 Comparative genomics of the bacterial thiamin pyrimidine

206 Comparative genomics of the first sequenced biotrophic p

207 led genome from an acidic fen, and performed comparative genomics of the four Ca.

208 Comparative genomics of the so far uncultured cluster-2

209 Comparative genomics of these bacteria reveals putative

210 s minireview, we focus on recent advances in comparative genomics of trace elements and explore the e

211 Comparative genomics of trace elements provides a founda

212 study reports the functional description and comparative genomics of two additional Dhc isolates and

213 Comparative genomics of two flatfish and transcriptomic

214 sults provide important resources for legume comparative genomics, plant breeding, and plastid geneti

215 To address this challenge, The Comparative Genomics Platform (CoGe) has developed two w

216 wledge and consists of Fusarium-ID, Fusarium Comparative Genomics Platform (FCGP) and Fusarium Commun

217 CNSs were integrated in the PLAZA 3.0 Dicots comparative genomics platform together with new function

218 samples, phylogenetic analysis, large-scale comparative genomics projects, and more.

219 agement in a number of genome annotation and comparative genomics projects.

220 we released updated annotation (gene models, comparative genomics, regulatory regions and variation)

221 Comparative genomics reveal a strong purifying selection

222 Comparative genomics revealed that B. cookei possessed s

223 Phylogenomics and comparative genomics revealed that P. fructicola had und

224 Comparative genomics revealed that the main novel miRNA

225 Comparative genomics revealed that they are remarkably s

226 Comparative genomics reveals that the potential for this

227 ate novel regulator of innate immunity using comparative genomics RNA interference screens in Caenorh

228 regulators of innate immunity, we performed comparative genomics RNA interference screens in the nem

229 Using comparative genomics, sequence and structure analysis, w

230 Comparative genomics show that these clusters are unlike

231 Comparative genomics showed that the mcr-1-carrying IncX

232 e gourd provides a useful resource for plant comparative genomics studies and cucurbit improvement.

233 Recent comparative genomics studies have demonstrated that thre

234 While many comparative genomics studies have focused on gene flux a

235 Comparative genomics studies have revealed evolutionary

236 diverse phenotypes, is well-suited for such comparative genomics studies if new genomes, which cover

237 Comparative genomics studies in primates are restricted

238 have significantly expanded the database for comparative genomics studies in these bacteria.

239 hesis, we conducted genetic, cytological and comparative genomics studies on hps and pil genes in Nos

240 at prokaryotic genomes can now be generated, comparative genomics studies require a flexible method f

241 However, proteomic, structural, and comparative genomics studies together have revealed exte

242 gene orders, to facilitate evolutionary and comparative genomics studies, as well as computationally

243 logous clusters is an important component of comparative genomics studies.

244 ding unseen opportunities and challenges for comparative genomics studies.

245 The ease of assembly and accuracy for comparative genomics suggest that our approach will scal

246 rimental results and data newly obtained via comparative genomics support the idea that CheV function

247 ingle genome, which may be missed by current comparative genomics techniques due to their limitations

248 s the activity of viral suppressors of RNAi, comparative genomics, the development of detailed maps o

249 synthesize these insights with evidence from comparative genomics to argue that lncRNAs may have play

250 We used comparative genomics to determine the conservation of th

251 -neutral sites providing great potential for comparative genomics to distinguish the signature of pur

252 We used a congenic breeding program and comparative genomics to exploit this variation in the ra

253 We used comparative genomics to identify a homologue of the pept

254 We used comparative genomics to identify a polymorphic (rs944458

255 s study illustrates the potential to exploit comparative genomics to identify enzymes and transcripti

256 high-resolution whole-genome sequencing and comparative genomics to identify key genetic features of

257 Recently, we used comparative genomics to identify MICU1 and MCU as the ke

258 We used comparative genomics to identify QTL for both nephropath

259 draft genomes of other nematodes let us use comparative genomics to identify regulatory sequences di

260 Here we use genetic crosses and comparative genomics to identify specific regulatory DNA

261 We used comparative genomics to identify the coenzyme F430 biosy

262 We used comparative genomics to leverage existing information fr

263 ilized phylogenetic tree reconstructions and comparative genomics to order the events leading to the

264 en diverse tRNAs, structural information and comparative genomics to predict the impact of all possib

265 Here, we used congenic models and comparative genomics to refine the Rf-3 candidate region

266 d the minimal SHFM1 critical region and used comparative genomics to select 26 evolutionary conserved

267 We used comparative genomics to study the evolution of prophages

268 lymorphism data, AspGD hosts a comprehensive comparative genomics toolbox that facilitates the explor

269 new software provides a feature-rich set of comparative genomics tools for inspection of multiple ge

270 RegPredict web server is designed to provide comparative genomics tools for reconstruction and analys

271 In addition to scalability, comparative genomics tools must also provide user-friend

272 dly interface is tightly integrated with the comparative genomics tools of MicrobesOnline.

273 nced genomes, there is a need to provide new comparative genomics tools that can address the analysis

274 ience research community, providing powerful comparative genomics tools that help to link model syste

275 In the current study we use comparative genomics, transcriptomics, and functional st

276 We used comparative genomics, transgenic mouse production, and m

277 However, comparative genomics using these species is hindered by

278 rse systems which counter this damage from a comparative genomics viewpoint.

279 To investigate this, comparative genomics was performed on a collection of va

280 c mapping, in silico haplotype analyses, and comparative genomics we identified inositol polyphosphat

281 Using comparative genomics we identify a large class of eukary

282 Finally, using comparative genomics, we compared our gene expression re

283 es combined with contextual information from comparative genomics, we computationally characterize ov

284 By comparative genomics, we confirmed that the strains isol

285 Using protein structure and comparative genomics, we elucidate several major influen

286 Using comparative genomics, we examined genetic diversity, tra

287 To support comparative genomics, we filled in divergence gaps in th

288 Through comparative genomics, we identified four distinct loci w

289 Using comparative genomics, we now show that CLYBL is strongly

290 Using comparative genomics, we predicted RbkR operator sites a

291 By using comparative genomics, we predicted SahR-binding DNA moti

292 Using comparative genomics, we show that genome dominance is h

293 Using genome sequencing and comparative genomics, we show that the ooc gene cluster

294 Phylogenomic analysis and comparative genomics were used to assess evolutionary re

295 -living S. griseus subsp. griseus NBRC13350, comparative genomics will elucidate critical components

296 Here we couple comparative genomics with genetic and lipid analyses to

297 ferases were identified from tomato by using comparative genomics with known XyG galactosyltransferas

298 Comparative genomics with related genera reveals that th

299 High-resolution molecular karyotyping and comparative genomics with Setaria italica (L.) P.

300 We argue that it is essential to supplement comparative genomics with ultra-deep sampling of populat