ライフサイエンスコーパス: compendium

1 n Arabidopsis thaliana microarray expression compendium.

2 BPS 'Guide to Receptors and Channels' (GRAC) compendium.

3 data to form a comprehensive gene expression compendium.

4 cape mobile app, and the Infectious Diseases Compendium.

5 pairs using gene expression data across the compendium.

6 s the information contained in the Hu et al. compendium.

7 file) and normalized data downloads of each compendium.

8 earch algorithm for rapid exploration of the compendium.

9 for fast, accurate exploration of the entire compendium.

10 ese new features are reflected in the ASTRAL compendium.

11 ARTA whose genes were overrepresented in the compendium.

12 ation core, akin to that of a diverse cancer compendium.

13 e different object types contained in a data compendium.

14 genes encode a palmitoylated protein in the compendium.

15 DrugCentral is an open-access online drug compendium.

16 Compendium analysis comparing gene expression profiles o

17 imately, we illustrate how our pathway-based compendium analysis more efficiently generates hypothese

18 Here we perform a compendium analysis of >200 large sequencing data sets t

19 Here, we developed a new pathway-based compendium analysis that couples multi-timepoint, contro

20 in the miRNA bodymap, an interactive online compendium and mining tool of high-dimensional newly gen

21 nagement and organ preservation to provide a compendium and to promote additional discussion and stud

22 eight microarray data sets from the Rosetta Compendium and were able to detect canonical binding mot

23 Relative RPs, scaled using this compendium, are superior to superenhancers in predicting

24 Our screening compendium can be used as a discovery tool both for unde

25 We also show that the compendium can be used to characterize pharmacological p

26 esis and, more generally, illustrate how our compendium can serve as a foundation for systematic inve

27 A compendium combining mammalian genes involved in adaptat

28 ntegration of a comprehensive, heterogeneous compendium comprising 38,088 genome-scale experiments.

29 A compendium comprising 578 human genes controlling FB or

30 The compendium contained 416 genes that have been positively

31 5 palmitoylation proteomics studies into one compendium containing 1,838 genes encoding palmitoylated

32 The pharmacological compendium described here should further the understandi

33 Here, we present a compendium DNA microarray analysis of multiple mouse ESC

34 rehensive Cancer Network Drugs and Biologics Compendium, DRUGDEX, and Clinical Pharmacology to the li

35 nd overrepresented numbers of genes from the compendium encoded cell surface receptors, signaling mol

36 a consistent, quality-controlled multi-omics compendium for Escherichia coli with cohesive meta-data

37 to facilitate efficient interrogation of the compendium for more focused analyses.

38 diction program, is used to build the astral compendium for sequence and structure analysis, and has

39 ated an extensive normalized gene expression compendium for the bacterium Escherichia coli that was f

40 lated NMR spectra obtained by constructing a compendium (>100) of zeolite clusters with and without n

41 rm enrichment analysis of 416 genes from the compendium has revealed 13 terms relevant to the scope o

42 The immune transcriptome compendium has revealed unsuspected cell lineage relatio

43 The results, as GHATAbase, a searchable compendium in Excel format, also provide a compilation f

44 The peptidase compendium, including the autophagy and proteosomal syst

45 The compendium is expected to be useful for pathology risk e

46 Gene annotation databases (compendiums maintained by the scientific community that

47 o identify Thy-1(+) CAF-enriched tumors in a compendium of 1,586 lung adenocarcinomas, the presence o

48 d machine learning to create a mitochondrial compendium of 1098 genes and their protein expression ac

49 We implemented CLIC using a compendium of 1774 mouse microarray datasets (28628 micr

50 and analyze a condition-annotated GCN from a compendium of 2,016 mixed gene expression data sets from

51 Here, we build a compendium of 2218 primary tumours across 12 human cance

52 f these adaptive mechanisms, we have mined a compendium of 2325 publicly available transcriptome prof

53 Utilizing a compendium of 289 mouse haematopoietic TF ChIP-seq datas

54 Analysis of a compendium of 367 microarray-based gene expression profi

55 We apply our algorithm to a compendium of 39 genome-wide chromatin modification maps

56 We validated the DMI approach on a compendium of 5,372 GEPs showing its predictive ability

57 Here we leverage a compendium of 58,648 long noncoding RNAs (lncRNAs) to su

58 A compendium of about 100 radiopharmaceuticals, based on t

59 We trained Basset on a compendium of accessible genomic sites mapped in 164 cel

60 RNA metabolism, broadly defined as the compendium of all processes that involve RNA, including

61 ards human disease database is an integrated compendium of annotated diseases mined from 68 data sour

62 The information we provide can be used as compendium of antibiotic resistance factors as well as t

63 we created ImmuneSigDB: a manually annotated compendium of approximately 5,000 gene-sets from diverse

64 ier-based regression to a cytokine-signaling compendium of approximately 8000 intracellular protein m

65 The Protease Exclusion method adds to the compendium of assays available for rapid analyte detecti

66 enefu R/Bioconductor package, a multi-tiered compendium of bioinformatics algorithms and gene signatu

67 of undocumented synonymy within a very large compendium of biomedical thesauri.

68 using the Unified Medical Language System, a compendium of biomedical vocabularies with nearly 1-mill

69 Importantly, our compendium of bZIP-DNA interactomes predicted bZIP bindi

70 This review provides an up-to-date compendium of c-di-GMP pathways connected to biofilm for

71 for Network Inference (GEMINI) that links a compendium of candidate regulatory interactions with the

72 of this potential source of beta cells, this compendium of carefully generated human gene expression

73 targets predicted from correlation across a compendium of cell types were also predictive of functio

74 ions and have led to the identification of a compendium of cellular factors involved in spatial genom

75 we present examples that illustrate how this compendium of ChIP-seq data can drive biological insight

76 creased the cost of DNA sequencing, the full compendium of common, recurrent somatic mutations in the

77 line database, which serves as an up-to-date compendium of COPD genetic associations and cumulative m

78 This compendium of current activities in cholangiocyte biolog

79 This compendium of current activities in cholangiocyte biolog

80 However, the compendium of data from murine infection models suggests

81 etworks, and in how to interpret the growing compendium of data on drug efficacy and toxicology in pa

82 A compendium of different solid carbonaceous materials det

83 A compendium of different types of abiotic chemical synthe

84 To identify the compendium of distal regulatory elements that govern myo

85 veloped a pre-clinical platform generating a compendium of drug sensitivity data totalling >4,000 ass

86 rface for searching lists of genes against a compendium of drug-gene interactions and potentially 'dr

87 nes and their cytotoxic responses to a large compendium of drugs reveals a significant improvement in

88 This publicly available compendium of environmentally controlled expression of e

89 tative model of canonical targeting, using a compendium of experimental datasets that we pre-processe

90 interpreted by comparison with an extensive compendium of expression data in the yeast Saccharomyces

91 m for NF-AT mediated gene expression and the compendium of expression data provides a quantitative pl

92 llenge in Drosophila melanogaster, and (2) a compendium of expression profiles of Saccharomyces cerev

93 les has been dropping steadily, generating a compendium of expression profiling over thousands of sam

94 is essential and what is dispensable in the compendium of Fe-S cluster protein functions in this cel

95 specific diseases and traits by providing a compendium of functional elements for follow-up study.

96 The past year has brought the ENCODE compendium of functional elements to critical mass, with

97 ses in the context of a large cross-organism compendium of functional predictions and networks.

98 ses in the context of a large cross-organism compendium of functional predictions and networks.

99 rformed by the same genes, as indicated in a compendium of gene annotation data from numerous differe

100 ch algorithm addresses these properties on a compendium of gene expression data for 54 diverse human

101 -scale, digitally based, cellular resolution compendium of gene expression dynamics in live animals.

102 modulators of a transcription factor from a compendium of gene expression profiles (GEPs).

103 functional associations among genes, given a compendium of gene expression profiles of human lung epi

104 Here, using a network biology approach and a compendium of gene expression profiles, we predict funct

105 ta, published RelA modulators and TGs, and a compendium of gene expression profiles.

106 These effects were compared to a compendium of gene expression responses for 52 unrelated

107 plementing these data with a large reference compendium of gene expression, which allows us to take i

108 From a compendium of gene sets related to a pathway, SA aims to

109 cification of neurons and provide the latest compendium of genes and signaling molecules involved in

110 The compendium of genes controlling FB or BW includes 578 hu

111 he objectives of this study were to create a compendium of genes relevant to feeding behavior (FB) an

112 The compendium of genes that potentially underwent positive

113 sequent validation experiments, identifies a compendium of genes whose silencing causes tamoxifen res

114 f integrative analysis of a manually curated compendium of genome-wide protein binding profiles in ou

115 , and these are accompanied by a substantial compendium of genomic and transcriptomic alterations tha

116 Leveraging the large compendium of genomic data to predict biomedical pathway

117 urbations on microbial growth across a large compendium of genotypes in archaea and yeast.

118 A compendium of global gene expression measurements from D

119 To this end, we model a large compendium of growth conditions as a multiplex network c

120 nucleases more than others, and we provide a compendium of guide RNAs predicted to have high efficacy

121 necrosis from exposure of rat livers to the compendium of hepatotoxicants.

122 escribe the generation and verification of a compendium of highly specific assays that enable quantif

123 strates the advantage of integrating a large compendium of historical epigenetic data for genomic stu

124 generated the first genome-scale expression compendium of human alternative splicing events using cu

125 eritance in Man (OMIM) is a manually curated compendium of human genetic variants and the correspondi

126 Intersecting the compendium of identified genetic associations with maps

127 ey of profiles extracted from a 100-compound compendium of image data revealed that only 10-15% of th

128 itation, we mined the literature to obtain a compendium of in vitro hyperthermia experiments investig

129 The Gene Regulation Database (GRBase) is a compendium of information on the structure and function

130 A compendium of information regarding PDZ complexes demons

131 Our study greatly expands the compendium of insulin promoter regulators and demonstrat

132 roach to compute the overlap between the DIP compendium of interaction data and a dataset of yeast tw

133 hus validated our methodology, we produced a compendium of interaction predictions for all pairwise c

134 network in Arabidopsis thaliana We present a compendium of known and putative Arabidopsis peptidases

135 tes are TATA free and are defined by a large compendium of known DNA sequence binding elements.

136 ms of this study therefore were: to create a compendium of mammalian genes related to adaptations to

137 target rules and on the use of an up-to-date compendium of mammalian microRNAs.

138 A compendium of markers such as CD44(high)/CD24(low), and

139 ic stages of spliceosome assembly based on a compendium of mass spectrometry experiments that identif

140 oretical standpoints, presents an up-to-date compendium of materials obtained by this means, and expo

141 For this study, we assembled an extensive compendium of mESC data: approximately 2.2 million data

142 A variants may thus be part of the expanding compendium of metabolic pathways involved in cancer biol

143 and genes affected by those treatments in a compendium of microarray profiles.

144 To elucidate PACAP interactions, a compendium of microarrays representing mRNA expression i

145 ne expression signatures in the context of a compendium of molecular concepts is useful in understand

146 The Breast Cancer Gene Database (BCGD) is a compendium of molecular genetic data relating to genes i

147 or Biology (MTB) database is a unique online compendium of mouse models for human cancer.

148 tabase is an expertly curated, comprehensive compendium of mouse models of human cancer.

149 Using a compendium of novel and existing genome-wide data sets,

150 T cells within an organism to respond to the compendium of pathogen challenges faced during a lifetim

151 This work has produced a compendium of phenotype profiles for the National Center

152 We propose that the detailed compendium of phenotypes exhibited by the Drosophila rg

153 tensities based on energy estimates from the compendium of physical activity and research on children

154 formats may be displayed alongside the rich compendium of precomputed data in the UCSC database.

155 tus, and integrated these data sets with our compendium of predicted Sirt3 targets.

156 This method and the compendium of probes and primers will be a useful resour

157 mbrane recycling systems is dependent upon a compendium of protein effectors.

158 PRINTS is a compendium of protein motif 'fingerprints' derived from

159 Protein pK(a) Database (PPD) v1.0 provides a compendium of protein residue-specific ionization equili

160 % sequence identity as defined by the ASTRAL compendium of protein structures are included.

161 We estimate that this compendium of proteins represents a high coverage of the

162 The PTM database is a compendium of public PTM data, coupled with user-uploade

163 The database contains a compendium of publicly available data and provides infor

164 ingent statistical criteria (FDR < 0.2) to a compendium of published and new microarray data (3, 6, 1

165 Extensive computational comparisons with a compendium of published gene expression profiles reveal

166 We analyzed a compendium of quantitative morphological signatures and

167 mechanistic framework for understanding this compendium of radical reactions.

168 The compendium of RBPs and this study will help us gain insi

169 ate specific areas of interest rather than a compendium of references.

170 A compendium of results from this and previous peptide stu

171 The MARGE framework includes a compendium of RPs derived from 365 human and 267 mouse H

172 A compendium of selected natural products containing two o

173 It provides a convenient compendium of sequence and structural information that o

174 knowledge of microRNAs (miRNA) grows from a compendium of sequences to annotated functional data it

175 The compendium of signals from all pools in the array-of-uni

176 oach to systematically analyze the PanCancer compendium of somatic mutations from 4,742 tumors relati

177 This study outlines a compendium of somatic mutations in primary, metastatic,

178 Our study provides a compendium of spatiotemporal Htt-interacting proteins in

179 Analysis of a large compendium of standing organ biomass sampled across a br

180 ndent data with a previously available large compendium of static perturbation responses, we identifi

181 ewing reference lists, reviewing a published compendium of studies of the clinical examination, and c

182 th this review article we aim at providing a compendium of the available methods, their theoretical f

183 are new to these topics, as well as being a compendium of the current state-of-the art for experts i

184 Here we show, using Sepkoski's compendium of the first and last stratigraphic appearanc

185 Rome IV is a compendium of the knowledge accumulated since Rome III w

186 n organization as chromosomes undergo a full compendium of transactions including DNA replication, re

187 redicting DNA sequence binding using a large compendium of transcription factor datasets.

188 with genome-wide in vivo binding data for a compendium of transcription factors, we discovered that

189 This compendium of transcriptome data provides valuable insig

190 ) model of the strain was constructed from a compendium of transcriptome data that was collected over

191 pecific transcript interleukin 2 (IL2) in a "compendium" of experiments involving both T cells and ot

192 We constructed a reference database or "compendium" of expression profiles corresponding to 300

193 This review article, part of the Compendium on Atherosclerosis, discusses recent advances

194 This review article, part of the Compendium on Sudden Cardiac Death, discusses the major

195 This compendium provides a much-needed resource for cell biol

196 The ASTRAL compendium provides several databases and tools to aid i

197 The ASTRAL Compendium provides several databases and tools to aid i

198 The ASTRAL compendium provides several databases and tools to aid i

199 The ASTRAL compendium provides several databases and tools to aid i

200 o National Comprehensive Care Network (NCCN) Compendium recommendations, a basis of insurer coverage

201 Mining the resulting compendium revealed, first, that protein synthesis inhib

202 In this Compendium Review, we discuss new drugs and intervention

203 We provide here a guide to a compendium series of articles that aimed to look forward

204 or improvements have been made to the ASTRAL compendium since its initial release 2 years ago.

205 In this compendium, some of the most important advances in this

206 te regression model generated from this data compendium successfully comprehends the various IL-2 pro

207 This compendium summarizes current knowledge of the genetic a

208 nical Microbiology on a biannual basis, this compendium summarizes novel species and taxonomic revisi

209 sed transcripts and provides the basis for a compendium that relates gene expression and annotation t

210 A compendium that summarizes previous findings of cohort s

211 anded substrate for the biennially published compendium, the Concise Guide to PHARMACOLOGY.

212 retrieve relevant H3K27ac profiles from the compendium to accurately model a query set of differenti

213 We have integrated the largest data compendium to date, which includes 31 CLIP experiments o

214 e power of a large RNA-sequencing expression compendium to infer regulatory activity from messenger R

215 of interest, users can query the expression compendium to systematically identify biological context

216 aomeganuphiomicronzeta]--in Greek crafty), a compendium to the SCOP database.

217 Using uncorrected data based on Sepkoski's compendium, we find significant autocovariance within or

218 Using this compendium, we focused on a well-known repressive mark,

219 We further revealed that genes from compendium were over-represented in the lists of genes e

220 OPe also incorporates and updates the ASTRAL compendium, which provides several databases and tools t

221 Our genome-wide RNA compendium will allow for a better understanding of meni

222 This compendium will review the clinical management of those