ライフサイエンスコーパス: complementary strand

1 pin helices (formed from folding of one self-complementary strand).

2 bold italics below as A or T in case of the complementary strand).

3 ether Tg was placed opposite dG or dA in the complementary strand.

4 one strand and a 5' two base overhang on the complementary strand.

5 telomeric duplex sequence and annealed to a complementary strand.

6 n be varied externally by hybridization to a complementary strand.

7 ne strand of the duplex DNA and displace the complementary strand.

8 the adducted strand and 75% cleavage of the complementary strand.

9 d and capping the 5'-terminal residue of the complementary strand.

10 that N(2)OPdG hydrogen bonds with dC in the complementary strand.

11 so, one strand turns around and becomes the complementary strand.

12 by lower-energy guanine sites on the same or complementary strand.

13 these ring-shaped hexamers, and displace the complementary strand.

14 d and approximately 53% transcribed from the complementary strand.

15 e same strand as the primary donor or in the complementary strand.

16 no incisions were observed in the nondamaged complementary strand.

17 oncurrent methylation of the CpG site on the complementary strand.

18 and and containing two 5'-GG-3' sites in the complementary strand.

19 wo functional interpretations, one from each complementary strand.

20 ation of CTG and CGG hairpins on the nascent complementary strand.

21 ired to an AA sequence in an otherwise fully complementary strand.

22 nd with the hypoxanthine and 12 bases on the complementary strand.

23 when they are complemented with a mismatched complementary strand.

24 posite the lesion at the 5'-boundary) in the complementary strand.

25 this DNA to hybridize to a surface-attached complementary strand.

26 one strand of a genomic dsRNA and not to the complementary strand.

27 roteins capable of synthesizing the telomere complementary strand.

28 nce or absence of the partner dC base in the complementary strand.

29 positions of the T and C are reversed in the complementary strand.

30 -direction and interacted primarily with the complementary strand.

31 dduct in both hosts owing to the lack of the complementary strand.

32 in the 3'-direction and interacted with the complementary strand.

33 strand while remaining untranslocated on the complementary strand.

34 complex has difficulty to hybridize with its complementary strand.

35 ed over G as the base-pairing partner in the complementary strand.

36 o its target molecule, or hybridize with its complementary strand.

37 s changes as a result of the addition of the complementary strand.

38 acid conformation that prevents pairing of a complementary strand.

39 he two highly mutable sequences in the T4 rI complementary strand.

40 apparent when the protein was linked to the complementary strand.

41 long one strand of the duplex and unwind the complementary strand.

42 w this formation occurs in the presence of a complementary strand.

43 cess that is coupled to the synthesis of the complementary strand.

44 in this oligonucleotide hybridized with its complementary strand.

45 e along one strand of the DNA and unwind the complementary strand.

46 m closely opposed breaks induced directly in complementary strands.

47 st RecD helicase and slower RecB helicase on complementary strands.

48 oding information and transferring it to new complementary strands.

49 uctures in promoting the slippage of the DNA complementary strands.

50 g occurs even in the presence of full-length complementary strands.

51 espect to its registry with the incoming and complementary strands.

52 product) presumably prevents reannealing of complementary strands.

53 =6) sequences, even in the presence of their complementary strands.

54 ated by mixing stoichiometric amounts of the complementary strands.

55 and/or 2,6-diaminopurine (DAP) in one of the complementary strands.

56 of triplexes with single-stranded pyrimidine complementary strands.

57 n tag sequence derived from the two original complementary strands.

58 ices through the programmed hybridization of complementary strands.

59 orated at terminal and internal positions on complementary strands.

60 rates between regions on the same strand and complementary strands.

61 ngle-strand breaks (SSBs)] is present on the complementary strand 1, 3 or 5 bases 5' or 3' opposite t

62 oscopy study shows that, in the absence of a complementary strand, 1,1/c,c ( n = 4,6) form a 1,2 GG (

63 Multiple bacterial effectors tagged with the complementary strand 11 epitope retained their biologica

64 tes were also observed that clustered on the complementary strand 11-15 bp from the first.

65 ding on the direct strand, (2) coding on the complementary strand, (3) non-coding.

66 drocarbon moiety to either dG5 or dG7 of the complementary strand, 5'-GGTAG5CG7ATGG-3'.

67 ffected by methylation of the adenine in the complementary strand, 5'-GTYGGA-3'.

68 tilized for mtrCDE transcription and, on the complementary strand, a 22-nucleotide stretch that conta

69 aptamer binds to its target and FAM-labeled complementary strand adsorbs on the surface of AuNPs.

70 Furthermore, addition of a complementary strand allowed the duplex adduct to reform

71 T 13 bp downstream (but not upstream) on the complementary strand, allowing JBP1 to maintain existing

72 plexes containing one hairpin in each of the complementary strands also separate in a gel as two isom

73 We describe a method, complementary strand analysis (CSA), for separating alle

74 sed position where it contacts the displaced complementary strand and facilitates unwinding.

75 1 to G10 in one strand and C11 to G20 in the complementary strand and in the second dimer, C101 to G1

76 he phosphodiester-sugar ring backbone of the complementary strand and its fast rotation with respect

77 that the differential extension between the complementary strand and its Watson-Crick pairing partne

78 ging end of the linear double-stranded DNA's complementary strand and then more slowly by progressive

79 ldehyde precursors of different lengths into complementary strands and ICL formation using a double r

80 long lifetimes even in the presence of their complementary strands and inhibit duplex reannealing at

81 f the DNA double helix: base pairing between complementary strands and stacking between adjacent base

82 rand helices (formed from association of two complementary strands) and below approximately 18 bp for

83 hysteretic "peeling" off one strand from its complementary strand, and (ii) a nonhysteretic transitio

84 modified strand, between C16 and A17 in the complementary strand, and between T4 N3H and FAPYG5 N1H.

85 GS3 stabilizes the fragment, RDR6 produces a complementary strand, and DCL4 cleaves the resulting dou

86 and extended with T7 polymerase to create a complementary strand, and the resulting termini are liga

87 arily concordant CpG methylation patterns on complementary strands, and (iv) we provide evidence that

88 30 degrees C), the DNA rapidly hybridizes to complementary strands, and chain-end biotin groups becom

89 CSB was found to support ATP-independent complementary strand annealing of DNA/DNA, DNA/RNA, and

90 h the 5'- and 3'-flanking nucleotides in the complementary strand are guanines.

91 lts demonstrate that 5'-GTGTGT motifs on the complementary strand are required to prevent premature e

92 Furthermore, the bases of the incoming and complementary strands are displaced away from the helix

93 In mixtures in which their complementary strands are in vast molar excess (stoichio

94 t 3'amidate duplexes, formed with DNA or RNA complementary strands, are more stable in water than tho

95 n during extension of a DNA strand using the complementary strand as a template.

96 and replace them with normal ones, using the complementary strand as a template.

97 and a fluorescein (FAM) to the 5' end of the complementary strand as the energy donor.

98 ciency of immobilized single-stranded DNA to complementary strands as a function of the immobilized D

99 surements show that the negative enthalpy of complementary strand association increases in magnitude

100 -stranded DNA (ssDNA) were exposed to 10-mer complementary strands at concentrations of 1 fM, 1 pM, a

101 P A1 and PTB, both of which also bind to the complementary strands at the 5' end of MHV RNA, together

102 nucleotide sequences containing two parallel complementary strands attached through 3'-3' and 5'-5' l

103 transfer of the Watson-Crick pairing of the complementary strand bases from the highly extended outg

104 r gene silencing by the guide strand (target complementary strand), better RISC assembly, persistence

105 disrupted or weakened, as were those in the complementary strand between C15, T16, and T17.

106 tachment, which after hybridization with its complementary strand brings about a considerable current

107 while the second hsdS gene is encoded by the complementary strand but without overlap with the other

108 ggesting dynamic replacement of the quencher-complementary strand by IFN-gamma molecules.

109 nontemplate strand of DNA displaced from its complementary strand by the "sterile" RNA transcript acr

110 ine bases covalently cross-linked across the complementary strands by 4'-hydroxymethyl-4,5',8-trimeth

111 using a simple hybridization assay with the complementary strand ("capture oligo") immobilized on th

112 e formation of Iz products in the unmodified complementary strand compared to the modified strand in

113 e hairpin and duplex states as a function of complementary strand concentration.

114 er probe, which is otherwise hybridised to a complementary strand containing a fluorescent probe.

115 h)G) oligonucleotides were hybridized to the complementary strand containing either C (NarI'(C)) or G

116 forms within the repeats during annealing of complementary strands containing equal lengths of repeat

117 e that S-DNA structures can form between two complementary strands containing equal numbers of repeat

118 thin the repeat tracts during reannealing of complementary strands, containing equal lengths of repea

119 ially recognise this type of damage when the complementary strand contains T opposite the 3', and C o

120 One of the complementary strands contains the fluorophore as an ins

121 used to measure the association constant of complementary strand DNA hybridization of 9- and 10-base

122 ribonucleoside triphosphates, or (iv) after complementary strand DNA replication in the presence of

123 esolution and reconstitution in vitro of the complementary strand DNA replication step of the phiX174

124 e general priming reaction or during phiX174 complementary strand DNA replication.

125 complex and support PriB-independent phiX174 complementary strand DNA replication.

126 ng both general priming-directed and phiX174 complementary strand DNA synthesis, as well as at replic

127 port a PriA-independent synthesis of phiX174 complementary strand DNA.

128 lex, only if the metal-containing duplex has complementary strands, does it show a chiral excess meas

129 uor 647) on one DNA strand and biotin on the complementary strand, donor and acceptor molecules are b

130 absence of streptomycin, aptamer/FAM-labeled complementary strand dsDNA is stable, resulting in the a

131 n transiently dissociates the triplet repeat complementary strands enabling the non-transcribed stran

132 ial, and fungal cells the ability to bind to complementary strands extending from patterned surfaces

133 (15)N-labeled DNA was annealed to the complementary strands, followed by BPDE treatment and li

134 to destabilize the donor duplex, freeing the complementary strand for homology sampling.

135 Competition between the probes and the complementary strand for the target sequence decreased r

136 r binds to its target, leading to release of complementary strand from aptamer and more protection ag

137 translocates unidirectionally, excluding the complementary strand from its central channel.

138 by encircling one strand while excluding the complementary strand from its central channel.

139 the same, suggesting that relocation of the complementary strand from its position in the intermedia

140 bligatory reaction intermediate in which the complementary strand from the duplex substrate has been

141 Complementary strands generate an isosbestic point and t

142 complexed with a 2'-O-methyl-ribonucleotide complementary strand, GmAmAmAmCm, was determined by UV t

143 akes place at the N-7 position of a targeted complementary strand guanine following strand exchange,

144 d that the hybrid of this conjugate with its complementary strand had a melting temperature that was

145 ad52 protein (HsRad52)-mediated annealing of complementary strands has been studied in detail, but li

146 mbly of a 14 base pair DNA double helix from complementary strands have been investigated by titratio

147 ing of short oligonucleotides (7-12 nt) to a complementary strand held under constant force.

148 The quantitative method uses complementary strand hybridization to gapped duplex DNA

149 Decrease in resonance frequency occurred as complementary strands hybridized to the immobilized prob

150 duplex and catalyze the displacement of the complementary strand in a reaction that is coupled to nu

151 ty for one strand of a PCR amplicon over the complementary strand in an ESI mass spectrum.

152 current was linear with the concentration of complementary strand in the range of 10-300 pg/mul with

153 erminal nucleotide need not hybridize to the complementary strand in the substrate.

154 The possibility of complementary strand inhibition was demonstrated but was

155 The complementary strand interacts primarily through base pa

156 owed that association enthalpies of unfolded complementary strands into completely folded duplexes in

157 omplete until over a 1000-fold excess of the complementary strand is added.

158 ction along single-stranded DNA, even when a complementary strand is also present within the protein'

159 into the circular crossover product and the complementary strand is expected to be incorporated into

160 rom a template strand in the presence of its complementary strand is inhibited by the stability of th

161 tiates noncanonically from the end where the complementary strand is recessed.

162 eferred to as the loading strand whereas the complementary strand is referred to as the displaced str

163 of duplex DNA with respect to separation of complementary strands is crucial for DNA executing its m

164 by strong DNA-protein contacts, whereas the 'complementary' strand is extended by the tension on the

165 ynyl-linked Os(II) nucleoside, placed on the complementary strands, is systematically moved toward th

166 ther the 5' or the 3' overhanging end of the complementary strand; joint molecules are formed only if

167 one strand of the duplex while excluding the complementary strand (known as steric exclusion).

168 cts experience a second nicking event on the complementary strand, leading to a double-stranded break

169 cleavage at the fourth nucleotide on the non-complementary strand, leading to staggered instead of bl

170 oth series were dependent on temperature and complementary strand length; the largest differences in

171 demonstrated that methylation of CpG at the complementary strands located in the promoter (-9, -102,

172 l-2'-deoxyuridine residues (one on each self-complementary strand) lowers the stability of the duplex

173 idely applied in solid-phase assays in which complementary strands must be detected against a complex

174 previously described as p35/38, binds to the complementary (-)-strand of the leader RNA and intergeni

175 n the copying of a 3'-NP-DNA template into a complementary strand of 3'-NP-DNA.

176 on Y-shape structure of dual-aptamer (DApt)-complementary strand of aptamer (CS) conjugate, gold ele

177 on of cocaine, based on hairpin structure of complementary strand of aptamer (CS), target-induced rel

178 er and 29-mer oligonucleotides annealed to a complementary strand of DNA.

179 rovide accurate methylation patterns for the complementary strand of each repeat sequence analyzed.

180 ation and oncogenesis, was also found in the complementary strand of HTLV-3.

181 DNA (ssDNA) and then pairs that DNA with the complementary strand of incoming duplex DNA.

182 75S/trx catalyze the synthesis of the entire complementary strand of M13 DNA, whereas gp5-C313S/trx h

183 he donor and acceptor sites) between which a complementary strand of nucleic acid is transferred.

184 ding site was mapped to nt 270 to 307 on the complementary strand of the 3'-UTR (c3'-UTR).

185 e in which the RNA is stably paired with the complementary strand of the acceptor DNA, indicative of

186 t molecules by transfer of the 5' end of the complementary strand of the linear duplex to the ssDNA.

187 icant response ( approximately 22 pm) to the complementary strand of the mutated type P. aeruginosa D

188 In this structure, the incoming recessed complementary strand of the oligonucleotide has switched

189 dine at nucleotide 95; both sites are on the complementary strand of the sequence assigned GenBank ac

190 A 5' phosphate on the target-complementary strand of the siRNA duplex is required for

191 for detection of AFB1 based on aptamer (Apt)-complementary strands of aptamer (CSs) complex which for

192 based on M-shape structure of aptamer (Apt)-complementary strands of aptamer (CSs) complex, exonucle

193 Molecular recognition between complementary strands of DNA allows construction on a na

194 Rad52 promotes the annealing of complementary strands of DNA bound by replication protei

195 es of slipped-strand structures by annealing complementary strands of DNA containing: (i) equal numbe

196 The complementary strands of DNA differ with respect to repl

197 ted when there are no biases between the two complementary strands of DNA in mutation and selection r

198 The annealing of complementary strands of DNA is a vital step during the

199 The hybridization of complementary strands of DNA is the underlying principle

200 Over sufficiently long windows, complementary strands of DNA tend to have the same base

201 ability to bind single-stranded DNA, anneal complementary strands of DNA, and interact with T7 DNA p

202 ccur at different frequencies on each of the complementary strands of DNA, it remains unclear whether

203 one of which is to promote the annealing of complementary strands of DNA.

204 or epigenetic information differs on the two complementary strands of DNA.

205 pe protein but does not mediate annealing of complementary strands of DNA.

206 crossover junctions assembled from four semi-complementary strands of DNA.

207 as in mutation and selection between the two complementary strands of DNA.

208 odons (rather than one-by-one) and used both complementary strands of genes as templates for translat

209 ed by the patterns of methylation on the two complementary strands of individual DNA molecules.

210 e extent of methylation symmetry between the complementary strands of individual DNA molecules.

211 e PCR, a double-stranded PCR method in which complementary strands of individual molecules are attach

212 All the miRNA star sequences (miRNA*), the complementary strands of miRNA that from miRNA/miRNA* du

213 Determining methylation patterns on the complementary strands of repeated sequences is difficult

214 The two complementary strands of restriction fragments are separ

215 e mass spectrum by analyzing only one of the complementary strands of restriction fragments.

216 ate how Hfq accelerates base pairing between complementary strands of RNA.

217 Rad52 also catalyzes the annealing of complementary strands of ssDNA, even when they are compl

218 terstrand crosslinks (ICLs), between the two complementary strands of the double helix, have an impor

219 leavage events at the scissile phosphates on complementary strands of the duplex are tightly coupled,

220 Mg(H(2)O)(6)(2+) ions bridge complementary strands of the duplex at multiple location

221 Notably, the MCMV miRNAs occur on complementary strands of the genome in specific regions,

222 A photo cross-linking to covalently link the complementary strands of the original templates to the s

223 aaRS classes were originally encoded by the complementary strands of the same primordial gene and (3

224 The slippage of the complementary strands of the TRS is probably responsible

225 Most surprisingly, Twi7 binds complementary strands of unequal length, while Twi10 bin

226 ding the cleavage site and also contacts the complementary strand one-half turn away, indicating that

227 CTTCCTT formed duplexes with the RNA and DNA complementary strands only in a parallel orientation.

228 sine residue (leaving an abasic site) in the complementary strand opposite a (+)-cis-BPDE-N(2)-dG les

229 rturbations for base aromatic protons in the complementary strand opposite to the modified guanine.

230 located between positions -80 and -90 on the complementary strand overlapping the NF-kappaB site.

231 ng analysis of these 19-base, partially self-complementary strands performed in 115 mM Na+ yielded ev

232 cial role in plasmid transformation, anneals complementary strands preferentially coated by SsbB to f

233 ining the nicking site is separated from its complementary strand prior to nicking.

234 logy, and then catalyses the exchange of the complementary strand, producing a new heteroduplex.

235 uble-stranded (ds) DNA substrates, where the complementary strand provides a template for subsequent

236 d state, but pulling on the 3'5' ends of the complementary strand reduces the strand-exchange rate fo

237 s, and slippage-mediated misalignment of the complementary strands relative to each other during DNA

238 cting in concert, due to slippage of the DNA complementary strands relative to each other.

239 The 5-methyl-2'-deoxycytidine on the complementary strand remains in the DNA helix, with the

240 groove of the helix while its partner on the complementary strand remains stacked.

241 geminiviruses is propagated by three modes: complementary strand replication (CSR), rolling circle r

242 Synthesis of the complementary strand required a DNA template consisting

243 her identified a family of overlapping small complementary-strand RNAs that transverse the replicatio

244 not reversed by heat, salt or EDTA, whereas complementary strand scission occurred at a piperidine-s

245 quently noted to share the sequence 5'-ACGC (complementary strand sequence 5'-GCGT).

246 residues in one strand and T residues in the complementary strand) sequence motifs.

247 target strand with the biosensor-immobilized complementary strand, showed consistent and proportional

248 show that applying force to the ends of the complementary strand significantly retards strand exchan

249 ntaining strand and 16-17 nucleotides in the complementary strand spanning the base adduct were prote

250 ntaining strand and 13-14 nucleotides in the complementary strand spanning the base adduct were prote

251 tes recognition of DNA damages in an RNA/DNA complementary strand-specific manner.

252 ver, when duplexes carry proximal pyrenes in complementary strands, strong excimer fluorescence is ob

253 nd T7 RNA polymerase are found to synthesize complementary strands successfully without any apparent

254 of the mismatched DNA relative the perfectly complementary strand, suggesting that the kinked state i

255 nner retains the ability to hybridize to its complementary strand, suggesting that these approaches m

256 most telomeres during every S phase and that complementary strand synthesis does not immediately foll

257 Here we show that complementary strand synthesis in early mitosis, ultrafi

258 We examined the mechanism of complementary strand synthesis in recipient cells follow

259 ere is a chromosomally encoded mechanism for complementary strand synthesis of incoming transferred D

260 rovided a robust mechanism for initiation of complementary strand synthesis on transferred DNA.

261 C and diG, which also serve as promoters for complementary strand synthesis, are critical for symptom

262 (RdRp) and facilitate de novo initiation of complementary strand synthesis.

263 s of discrete sizes mediate deletions during complementary strand synthesis.

264 Uncoated genomes support complementary-strand synthesis by T7 DNA polymerase, but

265 n studies revealed that in the presence of a complementary strand targeted MB could yield up to a 60-

266 an RNA template result in the synthesis of a complementary strand that contains a mixture of 2'-5' an

267 markedly different binding behavior toward a complementary strand that depends on the number of bases

268 binding and high interaction efficiency with complementary strands that are detected from solutions.

269 Nonetheless, we speculate that the complementary strands that comprise the ribozyme may acc

270 rand base-base overlap between the opposing, complementary strands that make up RNA/DNA hybrid duplex

271 When hybridized to a complementary strand, the ODN:RNA duplex was more stable

272 In turn, after the hybridization with its complementary strand, the voltammetric responses enable

273 c bond when paired opposite to U or G in the complementary strands, thereby placing the sterically de

274 both NC and SSHS NC facilitate annealing of complementary strands through electrostatic attraction,

275 3' conjugated at the 5'-end to CDPI3 and its complementary strand to an unmodified control duplex of

276 each DNA single-strand base pair with a self-complementary strand to form an octamer B-DNA duplex.

277 strates, with the second site located on the complementary strand to the one being followed and eithe

278 Annealing with the reverse complementary strands to produce double-stranded substra

279 tension on the base pairs that connect the 'complementary' strand to the 'outgoing' strand.

280 yclin (ORF72), and vFLIP (ORF71) and for the complementary strand transcript encoding K14 and vGPCR (

281 d fluorescence lifetime measurements using a complementary strand trap assay.

282 ligonucleotides bound at adjacent sites on a complementary strand undergo autoligation by displacemen

283 The limit of detection (LOD) for the complementary strand was calculated as 2.32 nM.

284 cific S-cdG lesion placed opposite dC in the complementary strand was obtained by molecular dynamics

285 rations from 8-oxo-7,8-dihydroguanine on the complementary strand was transfected into wild-type Esch

286 d in various mixtures with their DNA and RNA complementary strands was also performed.

287 zation responses to 1 fM, 1 pM, and 1 microM complementary strand were nearly the same in magnitude i

288 All sites on the complementary strand were within half a helical turn of

289 he effect of sequence context and mismatched complementary strands were also compared, suggesting tha

290 late additions at the 5' ends of the nascent complementary strands were not random, with a preference

291 nding to DNA and the rate of renaturation of complementary strands were similar for the two proteins,

292 tabilizing effect on hybrid formation with a complementary strand when this P base opposes A, T, and

293 ce, the Cas9 HNH nuclease domain cleaves the complementary strand, whereas the Cas9 RuvC-like domain

294 methylation of the opposing cytosine in the complementary strand, whereas the presence of 6-thioguan

295 lso mutated a long-noncoding (lnc)RNA in the complementary strand which has cis-regulatory transcript

296 s-143, -199b-5p, -618, -223, -145 and -145* (complementary strand)) whose levels were significantly e

297 ence including the initial codon for p32 and complementary strand with the initial codon for p30.

298 midate formed duplexes with both RNA and DNA complementary strands with a stability similar to that o

299 ere accessed by hybridizing and ligating the complementary strands with the knotted ssDNA templates.

300 e d(CACAXG*XACAC) complexed with the natural complementary strands, with X = T or C, or in oligonucle