ライフサイエンスコーパス: concatenated

1 m strains when a minimum of six enzymes were concatenated.

2 Here, a maximum-likelihood analysis of a concatenated 10-locus data set, as well as minimize-deep

3 d multiple substitutions per site within the concatenated (945 bp) nucleotide dataset, implying that

4 domains (protein islands), and these domains concatenated after T cell activation.

5 In a concatenated alignment of all six genes, the dN/dS ratio

6 o perform a maximum likelihood analysis of a concatenated alignment of conserved, single-copy genes.

7 Robust phylogenetic trees constructed using concatenated alignment of these genes placed M. lepromat

8 ogenies from these genes separately and as a concatenated alignment with and without small subunit (S

9 First, we concatenated alignments of all genes into a single align

10 dicate that, in both trees constructed using concatenated alignments of ribosomal proteins and trees

11 logy tests, the same methods were applied to concatenated alignments of subunits of eight conserved m

12 Phylogenetic trees for both single-gene and concatenated alignments were evaluated thoroughly by max

13 rees to the NCBI taxonomy, to trees based on concatenated alignments, and to trees produced by other

14 alpha-subunit and no mutation in the second (concatenated) alpha-subunit or an S4S5 point mutation in

15 bility method to individual agonist sites in concatenated (alpha4beta2)2alpha4 receptors, we determin

16 ological profiles were indistinguishable for concatenated (alpha7)5-nAChRs or for homomeric alpha7-nA

17 d a mutual information-based analysis of the concatenated amino acid sequences and identified an exte

18 We included *BEAST, concatenated analysis and several 'summary methods': BUC

19 ed to most of the orthologous clusters, both concatenated and individual, grouped the fly with humans

20 lock device was developed using enzyme-based concatenated AND logic gates resulting in the implicatio

21 ucted from these regions, some of which were concatenated and polymerized to enhance their immunogeni

22 These tags are PCR-amplified, purified, concatenated, and then cloned and sequenced.

23 A concatenated approach to incorporate bilateral severity

24 pe II beta-turns and the resulting series of concatenated beta-turns are thought to form a beta-spira

25 With the use of concatenated bilateral severity levels for AMD, decrease

26 ght cannot transactivate via out of context, concatenated binding sites.

27 ed expression a gfp reporter controlled by a concatenated C subelement oligonucleotide in daf-3 mutan

28 Expression of a concatenated cDNA encoding two or four linked subunits p

29 We expressed eight concatenated cDNAs in human embryonic kidney cells, whic

30 nit induced the same rapid deactivation of a concatenated channel as that observed for homotetrameric

31 bination of synthetic amino acid analogs and concatenated channel subunits we establish two H-bonds n

32 Multimeric GIRK constructs with several concatenated channel subunits were expressed in Xenopus

33 In this study, the concatenated chromosomal sequences from the three strain

34 rneurons in their target ganglion and form a concatenated circuit that links neighboring segmental ga

35 Individual tags are linked into ditags, concatenated, cloned and sequenced.

36 ials include full proteins in novel vectors, concatenated conserved protein regions, and polyvalent s

37 Three concatenated copies of the 10-bp Inr and its immediate 3

38 we establish a reference tree by evaluating concatenated core gene supertrees and whole genome gene

39 Phylogenetic analysis based on 397 concatenated core genes distinguished A. aphrophilus and

40 Concatenated core-gene phylogeny clusters all but one of

41 simony analysis were generated for combined (concatenated) cox2 and ITS-2 sequences from 167 individu

42 The unusual concatenated crystal structure of PrxIII consisting of t

43 ly used a priori approaches for partitioning concatenated data in maximum likelihood analyses, by gen

44 The concatenated data set is also used to estimate dates of

45 e analytical insight provided by MVSA of the concatenated data set was not obtained when either polar

46 MVSA of concatenated data sets provides results that are intuiti

47 Using a seven-gene concatenated dataset (nuclear EF2, LSU and SSU rRNAs, mi

48 d Bayesian inference (BI) methods based on a concatenated dataset of plastid-encoded rpoB, rpoC1 and

49 tion of time with features characteristic of concatenated DDMs and that this population signal can be

50 Protelomerase resolves a concatenated dimer of chromosomes as the last step of ch

51 ng perylene bisimide macrocyclic dimer and a concatenated dimer-dimer ring from dynamic self-assembly

52 haviors of both the monocyclic dimer and the concatenated dimer-dimer ring were modeled with the NWCh

53 Importantly, IP3R channels formed from concatenated dimers were fully functional as indicated b

54 henotype, and that recombination between the concatenated DNA and endogenous DNA was a gene replaceme

55 The concatenated DNA fragments of defined length, orientatio

56 ng construction of a core phylogeny based on concatenated DNA sequences.

57 The valve, which is made from seven concatenated DNA strands, can bind a specific ligand and

58 ic analyses were performed to assess whether concatenated enzyme methods can cluster closely related

59 pectra which are then combined into a single concatenated file and submitted for peptide identificati

60 n2 and lin4, monocyclic complement cyc2, and concatenated foldable rings cat4.

61 Linear, cyclic, and concatenated foldamers reveal that photoabsorption and e

62 In the 3D protocol, six concatenated fractions from the first dimension (C18, he

63 rotocol used a high pH-low pH scheme with 21 concatenated fractions.

64 RF1a fragment (940 nucleotides) and a 4.2 kb concatenated fragment were very similar to the MERS-CoV

65 Concatenated GABA+ micronetworks of AC --> AC and AC -->

66 ase (Fluc) under the regulatory control of a concatenated Gal4 promoter (Tg(G4F(+/-))).

67 Concatenated gene constructs were used to express precis

68 ian analysis can be excessively liberal when concatenated gene sequences are used, whereas bootstrap

69 o 16.8 Mb and inferred topologies using both concatenated gene tree approaches and species tree metho

70 pecies tree whose mode is congruent with the concatenated gene tree but can do so with less than half

71 ts consisting of single or a small number of concatenated genes have a significant probability of sup

72 contrast, analyses of the entire data set of concatenated genes yielded a single, fully resolved spec

73 ts, or concatenate haplotype segments if the concatenated haplotype segments are sufficiently support

74 le) dimensions, and have not been applied to concatenated helices with more than two segments.

75 Analyses of concatenated hemocyanin sequences resolved deep nodes in

76 631C), the presence of a single subunit in a concatenated hERG1 tetramer disrupted gating to the same

77 on gating and potency of channel block using concatenated hERG1 tetramers containing a variable numbe

78 Concatenated hERG1 tetramers containing four wild-type s

79 bution of individual subtypes within defined concatenated heterotetramers to the shaping of Ca(2+) si

80 robing the mechanisms of channel gating with concatenated heterotypic channels should be interpreted

81 , by comparing the biophysical properties of concatenated hexameric and tetrameric human Orai1 channe

82 ly, a simulated complete digest of 110 Mb of concatenated human sequence was used to create datasets

83 lar region of human JAM1 (hJAM1) reveals two concatenated Ig-type domains with a pronounced bend at t

84 le budding profile in 5-20 ms and from three concatenated ILVs in 80-200 ms.

85 full-length HIV-1 Gag/Pol/Env immunogens or concatenated immunogens consisting of only highly conser

86 ertip, physical features in the stimulus are concatenated in a particular order.

87 The 100 chromatograms were concatenated in a vector.

88 ll Pumby, for Pumilio-based assembly) can be concatenated in chains of varying composition and length

89 Concatenated inhibitions may represent exceptionally sta

90 e is known about how individual elements are concatenated into a behavioral sequence at the neural le

91 , sequences comprising informative SNPs were concatenated into a single combined data matrix and subj

92 a given length (e.g. 12mer and 16mer) may be concatenated into longer sequences (e.g. four tandem wor

93 To address this question, we created concatenated IP3R linked by short flexible linkers.

94 owever, the activity of channels formed from concatenated IP3R1 and IP3R2 heterodimers was dominated

95 A metabolomic approach employing concatenated LC-MS and NMR data was utilised for the fir

96 Calculation of the nucleotide divergence of concatenated locus sequences within and between MLST clu

97 rom genome sequences and using different (or concatenated) locus regions.

98 lucose oxidase) operating in concert as four concatenated logic gates (AND/OR), was designed to proce

99 ies of the clade, based on sequences of four concatenated low-copy nuclear loci.

100 e method, phylogenies are reconstructed from concatenated mammalian intronic genomes; the FFP derived

101 Congruence of this tree with that for concatenated mitochondrial proteins suggests that the ro

102 A comparison of the concatenated ML tree and the primary concordance (BUCKy)

103 Concatenated motifs translocate slower than the motifs a

104 VWF is a concatenated, multifunctional protein that has binding s

105 responsive shape-controlled frameworks from concatenated multiple helices (multihelices) with contro

106 Kinetoplast DNA (kDNA) is organized into a concatenated network of mini and maxicircles, positioned

107 We have concatenated new high-resolution solution structures of

108 Phylogenetic analyses of three concatenated nucleotide datasets using maximum likelihoo

109 Concatenated Orai1 constructs with four MutA monomers ex

110 i1 monomer along with different preassembled concatenated Orai1 constructs, we recently demonstrated

111 Analysis of complete genome sequences or concatenated ORF1/ORF2 amino acid sequences indicated th

112 es constructed from 16S rRNA gene sequences, concatenated orthologous proteins, and the core gene set

113 t route featuring dicyclizations to form 2,4-concatenated oxazoles and the mild synthesis of thiazole

114 ening of a phage expression library with the concatenated palindrome 2 as probe detected a distinct c

115 Functional expression in Xenopus oocytes of concatenated pentameric (alpha7)5-, (alpha7)4(beta2)1-,

116 Expression of concatenated pentameric constructs with this stoichiomet

117 recombinant proteins or synthetic peptides, concatenated peptides (QconCATs) were introduced as a co

118 l possible candidates were investigated, and concatenated polyproteins based on recombinantly express

119 A of all of the negative ion spectra and the concatenated positive and negative ion spectra showed a

120 We also present a two-level, concatenated procedure to improve the readout by use of

121 nonsynonymous SNPs, 121 intergenic SNPs, and concatenated profiles of 578 SNPs available for a subset

122 , we compiled a large data set composed of 7 concatenated protein sequences and performed comprehensi

123 lpC gene as well as phylogenomic analyses of concatenated protein sequences demonstrated that chrysop

124 More recent studies using concatenated protein sequences have increased the data p

125 sister, including genome-scale alignments of concatenated protein sequences, as well as a genomic gen

126 In phylogenetic trees of concatenated protein sequences, SIVdeb, SIVsyk, and SIVg

127 ificant effect of purifying selection in the concatenated protein-coding genes in domestic Bactrian c

128 The estimated dN/dS < 1 in the concatenated protein-coding genes suggested purifying se

129 For example, by mechanically unfolding concatenated proteins at different velocities, a dynamic

130 Moreover, concatenated PrxIII C168S reverts to single toroids on c

131 We find that the concatenated RBEs can facilitate the cytoplasmic transpo

132 m These properties recapitulate those of non-concatenated receptors expressed from a cRNA ratio of 1:

133 artificial reference chromosome composed of concatenated reference sequences, the "concatesome," as

134 gruent with the phylogeny reconstructed from concatenated ribosomal protein genes.

135 f the conserved regions of DdRp subunits and concatenated ribosomal proteins and might represent the

136 isms, which lead to the formation of complex concatenated rings.

137 then reports the English translation of all concatenated rules instantiated to reach that conclusion

138 ore the fact that different positions in the concatenated sequence came from different genes.

139 ents, followed by a second assembly of these concatenated sequences into large circular DNA.

140 to-female mutation rate ratio estimated from concatenated sequences of five perissodactyl introns was

141 Phylogenetic analysis of concatenated sequences of the eight loci indicated two d

142 The study demonstrates that the concatenated sequences of the housekeeping genes of B. b

143 otypeable pneumococci on a tree based on the concatenated sequences of the MLST loci but which had ST

144 However, a tree based on the concatenated sequences of the MLST loci in most cases un

145 The allelic profiles and/or concatenated sequences of the three genes agreed with mu

146 In contrast, concatenated sequences of two groups of mitochondrial ge

147 s of the maximum likelihood (ML) tree of the concatenated sequences with individual gene trees showed

148 llelic profiles, phylogenetic trees based on concatenated sequences, and a recently developed method

149 mate is obtained by using distances based on concatenated sequences.

150 , we have compared a phylogenetic tree for a concatenated set of 50 widespread ribosomal proteins wit

151 ruct a robust phylogeny of VARV by analyzing concatenated single nucleotide polymorphisms (SNPs) from

152 a 42-base strand of DNA composed entirely of concatenated sticky ends and that binds to four local ne

153 The large number (5000-10,000) and their concatenated structure make them difficult to sequence.

154 rmed from other surrogate alpha6 subunits or concatenated subunits and studies of other heteromeric n

155 or that, we used receptors formed of mutated concatenated subunits to selectively eliminate one of th

156 as participants listened to three streams of concatenated syllables, containing either statistical re

157 Here, we employ a recently developed concatenated tandem array of consensus TF response eleme

158 atabase search strategy are reasonable; (ii) concatenated target-decoy database searches are preferab

159 roughput of SMS platforms by generating long concatenated templates from pools of short DNA molecules

160 on of the number of mutant subunits within a concatenated tetramer as predicted by a sequential model

161 companying dramatic changes in colors, but a concatenated tetramer displays a multicolored composite

162 ontrast, a single wild-type subunit within a concatenated tetramer was sufficient to achieve half of

163 The perylene cyclic dimer and its concatenated tetramer were characterized using both stru

164 activities for the monocyclic dimer and the concatenated tetramer.

165 f the number of mutant subunits present in a concatenated tetramer.

166 er of wild-type subunits incorporated into a concatenated tetrameric channel, and four wild-type subu

167 ere combined with wild-type subunits to form concatenated tetrameric channels with defined subunit co

168 amic mutant cycle analysis by constructing a concatenated tetrameric KCNQ1 channel and by introducing

169 by characterizing the kinetic properties of concatenated tetramers containing a variable number of w

170 rozygous situation, we generated a series of concatenated tetramers of Orai1 that included different

171 subunits regardless of their positioning in concatenated tetramers.

172 We concatenated the subjects (n = 3) in each category and c

173 Separately, RXP-E was concatenated to a cytoplasmic transduction peptide (CTP)

174 ucleotide where the same AT-rich sequence is concatenated to a GC-rich sequence known to undergo a B-

175 alpha4, beta2, and delta subunits were concatenated to dimeric, trimeric, and, in some cases, p

176 series of overlapping 3-D images, which were concatenated to form a single 3-D mosaic (pixel resoluti

177 aper, we report the first MVSA analysis of a concatenated TOF-SIMS data set comprising positive ion a

178 Multiple duplicons are concatenated together to form larger blocks of wall-to-w

179 n developmental enhancers, we experimentally concatenated up to four enhancers from different genes a

180 One set of amplicons was concatenated using overlap extension PCR.

181 et and two of its repeated homologues in the concatenated vector.

182 ing membrane, plant ILVs form as networks of concatenated vesicle buds by a novel vesiculation mechan

183 cleotide XY, both computed from the sequence concatenated with its inverted complement).

184 cleotide XY, both computed from the sequence concatenated with its inverted complementary sequence.)

185 This Split LexA system can be concatenated with the Gal4/upstream activating sequence

186 ides that are common for all isoforms of APP concatenated with those tryptic peptides that are unique

187 OSCATs combine a series of epitope sequences concatenated with tryptic peptides in a single artificia

188 in by a sequence of rigid fragments that are concatenated without any degrees of freedom.