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1 predicted Arabidopsis promoter sequences and consensus sequences for 105 previously characterized tra
2                                          PCP consensus sequences for 27 species were prepared from 92
3                                              Consensus sequences for 5' and 3' splice sites and branc
4 nactive X chromosome) showed footprints at a consensus sequence for a CCAAT box, two weak Sp1 sites,
5                              Generation of a consensus sequence for a contig is based on an alignment
6 ed expression of the Ly-6E.1 gene and that a consensus sequence for a gamma-IFN-responsive element lo
7 nontoxic ingredients of the Celiac diet.) No consensus sequence for a high-affinity substrate of tTGa
8 holipase C-gamma1 (PLC-gamma1) that fits the consensus sequence for a mitogen-activated protein kinas
9                               The amino acid consensus sequence for a molybdenum cofactor binding sit
10                        This PDE contains the consensus sequence for a PDE catalytic domain, but share
11  with the intraperoxisomal localization, the consensus sequence for a peroxisomal-targeting signal 1
12          Intriguingly, this region harbors a consensus sequence for a phosphate-binding loop which is
13                     The IR region contains a consensus sequence for a protein (Pur), which binds pref
14 ast eight nucleotides of the 81 bases form a consensus sequence for a splice acceptor site.
15               The mutation destroys the only consensus sequence for a splicing branch point in intron
16 en cysteine residues, eight of which fit the consensus sequence for a Zn(2+)-binding RING domain.
17 ntical to those from honey bee tissues and a consensus sequence for A. mellifera.
18 f a TATA-less housekeeping gene promoter and consensus sequences for a number of potential DNA-bindin
19                We examined the virus genomic consensus sequences for a total of 37 full-length viral
20 e divergence distributions, phylogenies, and consensus sequences for Alu elements in primates includi
21  the recent identification of an RNA binding consensus sequence for AMV and ilarvirus coat proteins,
22 he primate germline by deriving a primordial consensus sequence for an Alu repetitive element which i
23 s had mutations within a domain containing a consensus sequence for an SH3-binding protein.
24                 The process for deriving PCP-consensus sequences for any group of aligned similar seq
25 er sequence consistent with an SP-1 site and consensus sequences for AP-1 and AP-2 enhancer elements,
26                                            A consensus sequence for Arc binding identifies several ad
27 ection method (SELEX) that revealed an 18-bp consensus sequence for Atf1-Pcr1 binding, 5'-GNVTATGACGT
28      We determined a general phosphorylation consensus sequence for ATM and identified putative in vi
29 ino acid cassette (A1) containing the Walker consensus sequence for ATP binding is replaced by a 24 a
30  members of a protein family that contains a consensus sequence for ATP binding, and purified PA700 e
31 As seemed to be replicated and 80% contained consensus sequences for autonomous replication origins t
32 articularly, this mutation is located in the consensus sequence for beta-adrenergic-activated protein
33 oter unveiled the presence of seven putative consensus sequences for beta-catenin/TCF4 binding, two o
34               Overlap of this motif with the consensus sequence for binding of Ca2+ channel beta subu
35 y related to the cAMP response element (CRE) consensus sequence for binding of cAMP-responsive transc
36  of CAMTA1-mutant mice, and elucidation of a consensus sequence for binding of CAMTA proteins to DNA
37 tein of the C terminus of SERCA1 indicated a consensus sequence for binding of XpYGSS; this is identi
38          The ybaW gene, which has a putative consensus sequence for binding the fatty acid degradatio
39            The latter two, which possess the consensus sequence for binding to PDZ domains (T/S-X-V-o
40 acid residues and thus matched very well the consensus sequence for binding to SH2 domains of src fam
41 idues (underlined) similar to the C-terminal consensus sequence for binding to syntrophin PDZ domains
42 s in the pro-domains of the PC family, and a consensus sequence for binding to the catalytic domain i
43     The woodchuck TNF gene promoter contains consensus sequences for binding of AP-1, AP-2, C/EBPbeta
44 ith sequence alignments allowed deduction of consensus sequences for binding of both proteins.
45 ns also possess similar, cysteine-containing consensus sequences for binding PDZ domains, this disulf
46 nking revealed the presence of multiple near consensus sequences for binding potential transcriptiona
47 ifs essential for initiation of replication: consensus sequences for binding the bacterial DnaA prote
48                                              Consensus sequences for binding these three transcriptio
49 an overlap of 158 amino acids, and contained consensus sequences for binding zinc, stabilizing the bi
50                                              Consensus sequences for both H1 histone-specific promote
51 rption ionization mass spectrometry revealed consensus sequences for both SH2 domains.
52 Furthermore, the WXXW motif is known to be a consensus sequence for C-mannosylation.
53                                          Two consensus sequences for c-myc in the 5' flanking region
54 ic peptides containing the His-Ala-Val (HAV) consensus sequence for cadherin dimerization also attenu
55 uences for heat shock proteins, and the RRAS consensus sequence for cAMP-PKA substrates.
56 nd intracellular loop (IL2) of SERT contains consensus sequences for cGMP-dependent protein kinase an
57                      The results establish a consensus sequence for chemoreceptor methylation sites i
58 e 1) Thr-382 is contained within a canonical consensus sequence for CKII phosphorylation and 2) wild
59 y of TAP-B-linked molecules diverge from the consensus sequence for class la molecules whereas, at th
60                This sequence conforms to the consensus sequence for cleavage by members of the furin
61   The Deformed binding sites do not have the consensus sequence for cooperative binding with the cofa
62 fs within its C-terminal region, including a consensus sequence for cortactin SH3 domain-binding pept
63      Based on this information, we propose a consensus sequence for CovR binding to DNA.
64                                          The consensus sequences for CspB, CspC and CspE are U/T stre
65                              Here, we used a consensus sequence for Dbl domains of Rho guanine nucleo
66     The program searches for clusters of the consensus sequence for DNA binding within a window (leng
67 h PrrA binds in vitro, to further define the consensus sequence for DNA binding.
68 ding the DSBs has led to the derivation of a consensus sequence for DSB formation.
69 t is distinct from the previously identified consensus sequence for E. coli and S. enterica.
70                                          The consensus sequence for each conserved region is as follo
71 ere sequenced and used to derive DNA-binding consensus sequence for each member.
72                  Each laboratory generated a consensus sequence for each sample and completed a quest
73 -site-selection experiments, we identify the consensus sequence for each subsite.
74 types, except for B', in comparison with the consensus sequence for each subtype.
75 equences are then used to create an accurate consensus sequence for each template, correcting for rec
76                                            A consensus sequence for each type of motif was determined
77                                          The consensus sequences for each N-linked site were mutated
78 quences were clustered and assembled to form consensus sequences for each organism, and these assembl
79 otal coding sequence DNA), distribution, and consensus sequences for each species present in IDB.
80 as not predicted by the previously developed consensus sequence for EBNA1's binding DNA.
81 POBEC3F and APOBEC3G have a different target consensus sequence for editing, and importantly, APOBEC3
82                                          The consensus sequence for efficient bypass of tetrahydrofur
83  an intrinsic RNase activity and a potential consensus sequence for endonucleolytic cleavage identifi
84 e Phe/Gly repeat domain which display common consensus sequences for ERK and p38 substrates.
85                  Three of the sites have the consensus sequence for ERK1 phosphorylation, and additio
86  A motif search algorithm was used to derive consensus sequences for ESEs recognized by these SR prot
87 ormatic approaches, we have identified three consensus sequences for forkhead transcription factor bi
88 This region is highly GC-rich containing the consensus sequence for four Sp1 elements (GGGCGG) and th
89  transcription start site, and which contain consensus sequences for GATA and interferon regulatory f
90 tified here as Thr231 and Ser235, are within consensus sequences for glycogen synthase kinase 3 (GSK-
91 ffected by tunicamycin or elimination of the consensus sequence for glycosylation at Asn70.
92 monstrated that Thr143 serves as part of the consensus sequence for glycosylation at N141, and it is
93       This substitution alters the predicted consensus sequence for glycosylation, Asn-X-Ser, adjacen
94 osaccharides from SP-A by mutagenesis of the consensus sequences for glycosylation had no effect on b
95 egions deviate significantly from recognized consensus sequences for Group I introns.
96 phosphorylation at Ser204, fitting the known consensus sequence for GSK3 substrates.
97              Thus, despite the lack of a -35 consensus sequence for H. pylori promoters, the -35 regi
98 hin the collagen tail of AChE, there are two consensus sequences for heparin binding of the form BBXB
99 sidues that exactly or nearly match proposed consensus sequences for heparin-binding domains (HBDs);
100                        Identification of the consensus sequences for HMGA2 represents an important st
101 nt (SELEX) procedure, we have identified two consensus sequences for HMGA2, 5'-ATATTCGCGAWWATT-3' and
102                         We also found a weak consensus sequence for host DNA at integration sites, an
103                                  A confident consensus sequence for Hsmar1, the first mariner transpo
104  domain of Notch or its homologs contain the consensus sequence for hydroxylation.
105 atalytic site of PDE, near the NKXD motif, a consensus sequence for interaction with the guanine ring
106                      Here, we report a novel consensus sequence for interaction with the PDZ-1 and PD
107                 GluR1 possesses a C-terminal consensus sequence for interactions with PDZ domains of
108 ge site is next to four arginine residues, a consensus sequence for intracellular subtilysin type pro
109  to A transition mutation is within a splice consensus sequence for intron 1.
110  3' boundary, in agreement with the proposed consensus sequence for intron spliced donor and acceptan
111 ins a highly conserved B30.2 motif, multiple consensus sequences for kinases, and post-Golgi sorting
112            This docking site conforms to the consensus sequence for known D-sites in other MKKs and c
113 er region indicated the presence of putative consensus sequences for known hypoxia-responsive regulat
114 tified ERSR cis-element, nor do they contain consensus sequences for known transcription factors.
115 , and possibly, a third region containing no consensus sequences for known transcription factors.
116 DR499Wp contains an NES that conforms to the consensus sequence for leucine-rich NESs.
117 gnal peptide terminated by LLISC, a probable consensus sequence for lipoprotein modification, and a m
118 gnal peptide terminated by LFVAC, a probable consensus sequence for lipoprotein modification, and a m
119        This region of the gene also contains consensus sequences for liver-enriched transcription fac
120  the microarray analysis revealed a putative consensus sequence for M. tuberculosis SigM of -35 GGAAC
121 hree Mac1-responsive elements in FRE7, a new consensus sequence for Mac1 binding can be established a
122 hionine, AAGATGG, conforms well to the Kozak consensus sequence for mammalian protein biosynthesis an
123 resented for all 17 exons and conform to the consensus sequences for mammalian splice sites.
124 ors, identified 2 decades ago, established a consensus sequence for methylation by methyltransferase
125 he site surrounding serine 721 is an optimum consensus sequence for mitogen-activated family of prote
126 -phosphate receptors engineered to contain a consensus sequence for modification by this enzyme.
127 xclusively in the sequence 5'-NAT-3', but no consensus sequence for modified sites has been found.
128                                FIP-1 has two consensus sequences for myristoylation which would be ex
129                                An additional consensus sequence for N-glycosylation at Asn 662 is lik
130 o that of peptides, and the requirement of a consensus sequence for N-glycosylation further limits th
131 mmunoglobulin (Ig)-like domains, each with a consensus sequence for N-glycosylation.
132            The latter defines an Asn-Xaa-Thr consensus sequence for N-glycosylation.
133 S, and A125T were introduced to preserve the consensus sequence for N-linked glycosylation found in h
134 ids (PALLREAENFTLFIKNS) that includes an NFT consensus sequence for N-linked glycosylation.
135            Human CD69 contains only a single consensus sequence for N-linked oligosaccharide addition
136 laced by those of src, which also contains a consensus sequence for N-myristoylation, or by those of
137                    CaBP1 and CaBP2 contain a consensus sequence for N-terminal myristoylation, simila
138 ineering of the p19Arf N terminus to provide consensus sequences for N-acetylation limited Arf ubiqui
139 tionally significant protein motifs revealed consensus sequences for N-glycosylation, protein kinase
140 r domain of these receptors contains several consensus sequences for N-linked glycosylation that may
141            In addition, these data suggest a consensus sequence for NESs of the Rev/Rex class.
142                                   We defined consensus sequences for Neurogenin and NeuroD binding an
143  the bcl-x gene promoter contains a putative consensus sequence for NF-kB/CS4 responsive activation.
144 e in Bacillus megaterium, which reflects the consensus sequence for non-alkaliphilic Bacillus.
145 amer binding motif and also conformed to the consensus sequence for nuclear matrix attachment regions
146 sites within the ICR are very similar to the consensus sequence for nuclear receptor extended half si
147 that NLVCF is a novel gene that contains two consensus sequences for nuclear localization signals.
148   Sequence analysis revealed the presence of consensus sequences for numerous transactivating factors
149             We recently proposed a broadened consensus sequence for O-fucose, C(2)X(3-5)(S/T)C(3) (wh
150                Although the current putative consensus sequence for O-GlcNAcylation predicts 18 O-Glc
151 n this finding, we propose a revision of the consensus sequence for O-glucosylation to allow alanine
152     Cysteines are present in each domain and consensus sequences for O-linked glycosaminoglycans are
153 ences of these selective substrates with the consensus sequence for optimal substrates for t-PA, deri
154                              Nevertheless, a consensus sequence for origins has yet to be identified
155    Our data indicate that the generally held consensus sequences for p34(cdc2) represent a significan
156 ynamics simulations on DNA segments with the consensus sequence for p53-specific binding, half site D
157  protein overlaps a PuPuPuC(A/T)(T/A)GPyPyPy consensus sequence for p53.
158 rticular importance because of the lack of a consensus sequence for palmitoylation.
159           We used all 10 sites to refine the consensus sequence for parS.
160 among themselves and with previously defined consensus sequences for Pax-5 and Pax-2.
161                                            A consensus sequence for Pbx1-HoxA10 DNA binding has been
162                          The mutation of the consensus sequences for PC cleavage in the lefty protein
163 ger group of peptides containing a different consensus sequence for PCNA binding was discovered.
164 an extended "PIF" sequence C-terminal to the consensus sequence for PDK1 phosphorylation.
165 esis contained sequences which resembled the consensus sequence for PhoB binding.
166  61 and the surrounding amino acids are in a consensus sequence for phosphorylation by casein kinase
167                 This threonine lies within a consensus sequence for phosphorylation by casein kinase
168            Phosphorylation of Ser319 forms a consensus sequence for phosphorylation by CK1, allowing
169             Tyr-161 shares similarity to the consensus sequence for phosphorylation by the nonrecepto
170 88 of APS is contained in a protein kinase B consensus sequence for phosphorylation conserved in APS
171   Both of these proteins, which have optimal consensus sequences for phosphorylation by Fes, were tig
172 sites do not correspond to the known optimum consensus sequences for phosphorylation by MAPK (PX(S/T)
173                          The large number of consensus sequences for phosphorylation by PKA has natur
174   Each species' amino acid sequence contains consensus sequences for phosphorylation by PKC (KVT(72)V
175 s of amino acid residues thought to serve as consensus sequences for phosphorylation by serine/threon
176                The StAR protein contains two consensus sequences for phosphorylation catalyzed by pro
177                       The previously derived consensus sequence for phosphotyrosine recognition by th
178 ression of COX-2 by PMA and the existence of consensus sequences for PKC phosphorylation, it appears
179 lo-alpha in which Ser-1072 (the only optimal consensus sequence for PKG phosphorylation) was replaced
180 quences for PLK2, -3, and -4 and an expanded consensus sequence for PLK1, which we use to design an o
181                  These findings suggest that consensus sequences for posttranslational modifications
182 f the SF3b155 sites defines an (R/K)nXRW(DE) consensus sequence for predicting U2AF65-UHM ligands fro
183  four animals, the new sequences represented consensus sequences for primate lentiviruses, whereas th
184 tion start sites showed good homology to the consensus sequences for promoter elements of sigma(F)-de
185  katA is a sequence that closely matches the consensus sequence for promoters regulated in Escherichi
186                       This region contains a consensus sequence for protein kinase A, RRAS(230)F, and
187 al alterations, and ii) define an amino acid consensus sequence for protein palmitoylation.
188 cent protein (GFP)-TOP1 corresponding to the consensus sequence for protein sumoylation (PsiKXE, wher
189 he Arf GAP domain, and one of these fits the consensus sequence for PtdIns(3,4,5)P(3) binding.
190  surrounding phosphotyrosine 317 matches the consensus sequence for recognition by the phosphotyrosin
191  the T-arm of tRNA and constructed a minimal consensus sequence for RUMT recognition and catalysis.
192 lerated within the stem-loop-forming genomic consensus sequence for self-catalyzed site-specific depu
193                                          The consensus sequences for self-depurination of such G- and
194                                    FIP-2 has consensus sequences for several potential posttranslatio
195 d N-terminal polyproline regions fitting the consensus sequence for SH3 domain ligands, and a YDYV mo
196 tored the binding selectivity to the general consensus sequence for SH3 domains, the PXXP motif.
197 ion in SIV Nef was strikingly similar to the consensus sequence for SH3 ligand domains possessing the
198 ed genes in the sigH regulon with a putative consensus sequence for SigH binding that was recognized
199 nd other regulatory regions led to a revised consensus sequence for sigmaE-dependent promoters.
200               Here, we exploit a preliminary consensus sequence for sigmaR target promoters to identi
201 experiments with oligonucleotides containing consensus sequences for Sp1 and AP-1 binding identified
202 omoter contains 1-base pair (bp) overlapping consensus sequences for Sp1 and MAZ transcription factor
203  to the CH exons from another locus by using consensus sequences for splicing donor and acceptor site
204                   This site is adjacent to a consensus sequence for Src-mediated tyrosine phosphoryla
205 hese two tyrosine residues are surrounded by consensus sequences for Src homology 2 (SH2) domain bind
206 , contain a proline-rich region that matches consensus sequences for Src homology 3 (SH3) ligands.
207             Most splice junctions conform to consensus sequences for such junctions.
208 uence homology of a sample tested to a group consensus sequence for that sample.
209                    This site lies within the consensus sequence for the acidotrophic kinases, casein
210 eness to GnRH-2 (SURG-2), which contains the consensus sequence for the activating protein-1-binding
211 a fluorescein-labeled decoy ODN containing a consensus sequence for the AP-1 transcription factor, we
212 tinct LexA binding sites reveals an expanded consensus sequence for the B. subtilis operator: 5'-CGAA
213 functional beta-lactamase mutants revealed a consensus sequence for the binding of BLIP.
214              The phosphorylation generated a consensus sequence for the binding of the SH2 domain of
215  Altering the enhancer pyrimidine tract to a consensus sequence for the binding of U2AF eliminated en
216 sing an oligonucleotide corresponding to the consensus sequence for the biotin-binding motif, two unl
217         We have assembled the predicted mRNA consensus sequence for the chicken UBE3A gene using publ
218 E, 5'-TGACGTCA-3', has been described as the consensus sequence for the cis-element that directs cAMP
219  cleaved within the gamma2 chain matches the consensus sequence for the cleavage of type I, II, and I
220                                            A consensus sequence for the coiled-coil copine-binding si
221 ted species allowed us to deduce an expanded consensus sequence for the compositionally unusual promo
222 pe 1 repeats (TSR), seven of which contain a consensus sequence for the direct addition of fucose to
223 ly transcribed flagellar promoters possess a consensus sequence for the DNA-binding protein integrati
224  of homology to each other as well as to the consensus sequence for the Escherichia coli Fur protein.
225   To assay the genomic DNA, we established a consensus sequence for the first 12 kb of the COL1A1 gen
226                                          The consensus sequence for the first family, HeliBat1, displ
227 ulting structural changes alter the adjacent consensus sequence for the guanine ring binding of GDP/G
228  the major start site P1 is dependent upon a consensus sequence for the housekeeping sigma factor Sig
229  transcribed from promoters containing a new consensus sequence for the human initiator (Inr) core pr
230 r purine and Y stands for pyrimidine, as the consensus sequence for the KCS element, both for basal a
231  395 and threonine 1179) contained a perfect consensus sequence for the mitogen-activated protein kin
232                                            A consensus sequence for the mycobacterial OxyR recognitio
233                                          The consensus sequence for the NAD(P)H binding site [(V/I)(A
234 yotic and eukaryotic P5CRs is similar to the consensus sequence for the NAD(P)H-binding site of other
235 b and Ec core sequences are identical to the consensus sequence for the nuclear hormone receptor supe
236 id sequence shows regions of homology to the consensus sequence for the peptidyl carrier protein (PCP
237 he purified protein and the other based on a consensus sequence for the phosphorylation site of P-typ
238                        The lack of a defined consensus sequence for the ppGalNAcTs makes the predicti
239 h residues 17 to 21 (L-A-A-C-S) matching the consensus sequence for the prolipoprotein cleavage site
240     The Alu sequence was less similar to the consensus sequence for the PV or Sb2 subfamilies, subfam
241                                            A consensus sequence for the second ancient mariner identi
242                                          The consensus sequence for the selected thioaptamers showed
243  promoters have excellent matches to the -10 consensus sequence for the sigma 70 subunit of Escherich
244 contained a GC-rich region consistent with a consensus sequence for the SP1 family, that was sufficie
245 seven conserved tyrosines, a phosphorylation consensus sequence for the Src family of tyrosine kinase
246 alysis predicts a COOH-terminal (E/Q)(S/T)XV consensus sequence for the strongest binding to the firs
247  vivo binding sites have a weak match to the consensus sequence for the transcription factor being an
248                                            A consensus sequence for the two direct repeats bound by H
249 ine phosphorylation are also present, as are consensus sequences for the binding of SH2 and PDZ domai
250             The human iNOS promoter contains consensus sequences for the binding of transcription fac
251 of a TATA-box, a high GC region, and several consensus sequences for the binding of transcription fac
252                                          The consensus sequences for the DNA polymerase gamma exonucl
253  ChIP-chip studies have provided conflicting consensus sequences for the FOXP2-binding site.
254                                          The consensus sequences for the high affinity UhpA-binding s
255 BP-1 gene structure revealed three potential consensus sequences for the hypoxia response element (HR
256 bling EST sequences to produce high-fidelity consensus sequences for the represented genes (F.L. et a
257 and antagonists on Muc-1 expression, because consensus sequences for the response elements of these s
258                      All the sites contained consensus sequences for the serine/threonine-proline-dir
259 genome were sufficient to provide functional consensus sequences for the THAP domains, they do not sp
260 .1% identity of nt sequences and contain the consensus sequences for the transcription factors AP-2 a
261                                              Consensus sequences for the two study groups were identi
262            In the present study we derived a consensus sequence for this entire ORF (ORF2) as well as
263 ed and oriented using known genes, BAC ends, consensus sequences for transcript assemblies, and compa
264 nt DNA-protein complex that was abolished by consensus sequence for transcription factor ZNF143/76 or
265 ations identified were in close proximity to consensus sequences for transcription control elements w
266 moieties, accounting, in part, for the broad consensus sequence for TrmA substrates.
267  site of human PPT-I promoter and identified consensus sequences for two cAMP response elements (CRE)
268 henylalanineCOOH, that closely resembles the consensus sequence for type-1 peroxisomal targeting sign
269                           Both Ser reside in consensus sequences for type II calmodulin-dependent pro
270 nine replacement of three tyrosines within a consensus sequence for tyrosine sulfation abolished bind
271                          The phosphorylation consensus sequence for Ypk1 was similar to that for PKBa
272 recognize several DNA substrates without the consensus sequence for YY1 in vitro, and DNA binding is
273       Database search revealed presence of a consensus sequence for zinc finger protein gut-enriched

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