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1 predicted Arabidopsis promoter sequences and consensus sequences for 105 previously characterized tra
4 nactive X chromosome) showed footprints at a consensus sequence for a CCAAT box, two weak Sp1 sites,
6 ed expression of the Ly-6E.1 gene and that a consensus sequence for a gamma-IFN-responsive element lo
7 nontoxic ingredients of the Celiac diet.) No consensus sequence for a high-affinity substrate of tTGa
8 holipase C-gamma1 (PLC-gamma1) that fits the consensus sequence for a mitogen-activated protein kinas
11 with the intraperoxisomal localization, the consensus sequence for a peroxisomal-targeting signal 1
16 en cysteine residues, eight of which fit the consensus sequence for a Zn(2+)-binding RING domain.
18 f a TATA-less housekeeping gene promoter and consensus sequences for a number of potential DNA-bindin
20 e divergence distributions, phylogenies, and consensus sequences for Alu elements in primates includi
21 the recent identification of an RNA binding consensus sequence for AMV and ilarvirus coat proteins,
22 he primate germline by deriving a primordial consensus sequence for an Alu repetitive element which i
25 er sequence consistent with an SP-1 site and consensus sequences for AP-1 and AP-2 enhancer elements,
27 ection method (SELEX) that revealed an 18-bp consensus sequence for Atf1-Pcr1 binding, 5'-GNVTATGACGT
29 ino acid cassette (A1) containing the Walker consensus sequence for ATP binding is replaced by a 24 a
30 members of a protein family that contains a consensus sequence for ATP binding, and purified PA700 e
31 As seemed to be replicated and 80% contained consensus sequences for autonomous replication origins t
32 articularly, this mutation is located in the consensus sequence for beta-adrenergic-activated protein
33 oter unveiled the presence of seven putative consensus sequences for beta-catenin/TCF4 binding, two o
35 y related to the cAMP response element (CRE) consensus sequence for binding of cAMP-responsive transc
36 of CAMTA1-mutant mice, and elucidation of a consensus sequence for binding of CAMTA proteins to DNA
37 tein of the C terminus of SERCA1 indicated a consensus sequence for binding of XpYGSS; this is identi
40 acid residues and thus matched very well the consensus sequence for binding to SH2 domains of src fam
41 idues (underlined) similar to the C-terminal consensus sequence for binding to syntrophin PDZ domains
42 s in the pro-domains of the PC family, and a consensus sequence for binding to the catalytic domain i
43 The woodchuck TNF gene promoter contains consensus sequences for binding of AP-1, AP-2, C/EBPbeta
45 ns also possess similar, cysteine-containing consensus sequences for binding PDZ domains, this disulf
46 nking revealed the presence of multiple near consensus sequences for binding potential transcriptiona
47 ifs essential for initiation of replication: consensus sequences for binding the bacterial DnaA prote
49 an overlap of 158 amino acids, and contained consensus sequences for binding zinc, stabilizing the bi
54 ic peptides containing the His-Ala-Val (HAV) consensus sequence for cadherin dimerization also attenu
56 nd intracellular loop (IL2) of SERT contains consensus sequences for cGMP-dependent protein kinase an
58 e 1) Thr-382 is contained within a canonical consensus sequence for CKII phosphorylation and 2) wild
59 y of TAP-B-linked molecules diverge from the consensus sequence for class la molecules whereas, at th
61 The Deformed binding sites do not have the consensus sequence for cooperative binding with the cofa
62 fs within its C-terminal region, including a consensus sequence for cortactin SH3 domain-binding pept
66 The program searches for clusters of the consensus sequence for DNA binding within a window (leng
75 equences are then used to create an accurate consensus sequence for each template, correcting for rec
78 quences were clustered and assembled to form consensus sequences for each organism, and these assembl
79 otal coding sequence DNA), distribution, and consensus sequences for each species present in IDB.
81 POBEC3F and APOBEC3G have a different target consensus sequence for editing, and importantly, APOBEC3
83 an intrinsic RNase activity and a potential consensus sequence for endonucleolytic cleavage identifi
86 A motif search algorithm was used to derive consensus sequences for ESEs recognized by these SR prot
87 ormatic approaches, we have identified three consensus sequences for forkhead transcription factor bi
88 This region is highly GC-rich containing the consensus sequence for four Sp1 elements (GGGCGG) and th
89 transcription start site, and which contain consensus sequences for GATA and interferon regulatory f
90 tified here as Thr231 and Ser235, are within consensus sequences for glycogen synthase kinase 3 (GSK-
92 monstrated that Thr143 serves as part of the consensus sequence for glycosylation at N141, and it is
94 osaccharides from SP-A by mutagenesis of the consensus sequences for glycosylation had no effect on b
98 hin the collagen tail of AChE, there are two consensus sequences for heparin binding of the form BBXB
99 sidues that exactly or nearly match proposed consensus sequences for heparin-binding domains (HBDs);
101 nt (SELEX) procedure, we have identified two consensus sequences for HMGA2, 5'-ATATTCGCGAWWATT-3' and
105 atalytic site of PDE, near the NKXD motif, a consensus sequence for interaction with the guanine ring
108 ge site is next to four arginine residues, a consensus sequence for intracellular subtilysin type pro
110 3' boundary, in agreement with the proposed consensus sequence for intron spliced donor and acceptan
111 ins a highly conserved B30.2 motif, multiple consensus sequences for kinases, and post-Golgi sorting
113 er region indicated the presence of putative consensus sequences for known hypoxia-responsive regulat
114 tified ERSR cis-element, nor do they contain consensus sequences for known transcription factors.
115 , and possibly, a third region containing no consensus sequences for known transcription factors.
117 gnal peptide terminated by LLISC, a probable consensus sequence for lipoprotein modification, and a m
118 gnal peptide terminated by LFVAC, a probable consensus sequence for lipoprotein modification, and a m
120 the microarray analysis revealed a putative consensus sequence for M. tuberculosis SigM of -35 GGAAC
121 hree Mac1-responsive elements in FRE7, a new consensus sequence for Mac1 binding can be established a
122 hionine, AAGATGG, conforms well to the Kozak consensus sequence for mammalian protein biosynthesis an
124 ors, identified 2 decades ago, established a consensus sequence for methylation by methyltransferase
125 he site surrounding serine 721 is an optimum consensus sequence for mitogen-activated family of prote
126 -phosphate receptors engineered to contain a consensus sequence for modification by this enzyme.
127 xclusively in the sequence 5'-NAT-3', but no consensus sequence for modified sites has been found.
130 o that of peptides, and the requirement of a consensus sequence for N-glycosylation further limits th
133 S, and A125T were introduced to preserve the consensus sequence for N-linked glycosylation found in h
136 laced by those of src, which also contains a consensus sequence for N-myristoylation, or by those of
138 ineering of the p19Arf N terminus to provide consensus sequences for N-acetylation limited Arf ubiqui
139 tionally significant protein motifs revealed consensus sequences for N-glycosylation, protein kinase
140 r domain of these receptors contains several consensus sequences for N-linked glycosylation that may
143 the bcl-x gene promoter contains a putative consensus sequence for NF-kB/CS4 responsive activation.
145 amer binding motif and also conformed to the consensus sequence for nuclear matrix attachment regions
146 sites within the ICR are very similar to the consensus sequence for nuclear receptor extended half si
147 that NLVCF is a novel gene that contains two consensus sequences for nuclear localization signals.
148 Sequence analysis revealed the presence of consensus sequences for numerous transactivating factors
151 n this finding, we propose a revision of the consensus sequence for O-glucosylation to allow alanine
152 Cysteines are present in each domain and consensus sequences for O-linked glycosaminoglycans are
153 ences of these selective substrates with the consensus sequence for optimal substrates for t-PA, deri
155 Our data indicate that the generally held consensus sequences for p34(cdc2) represent a significan
156 ynamics simulations on DNA segments with the consensus sequence for p53-specific binding, half site D
163 ger group of peptides containing a different consensus sequence for PCNA binding was discovered.
166 61 and the surrounding amino acids are in a consensus sequence for phosphorylation by casein kinase
170 88 of APS is contained in a protein kinase B consensus sequence for phosphorylation conserved in APS
171 Both of these proteins, which have optimal consensus sequences for phosphorylation by Fes, were tig
172 sites do not correspond to the known optimum consensus sequences for phosphorylation by MAPK (PX(S/T)
174 Each species' amino acid sequence contains consensus sequences for phosphorylation by PKC (KVT(72)V
175 s of amino acid residues thought to serve as consensus sequences for phosphorylation by serine/threon
178 ression of COX-2 by PMA and the existence of consensus sequences for PKC phosphorylation, it appears
179 lo-alpha in which Ser-1072 (the only optimal consensus sequence for PKG phosphorylation) was replaced
180 quences for PLK2, -3, and -4 and an expanded consensus sequence for PLK1, which we use to design an o
182 f the SF3b155 sites defines an (R/K)nXRW(DE) consensus sequence for predicting U2AF65-UHM ligands fro
183 four animals, the new sequences represented consensus sequences for primate lentiviruses, whereas th
184 tion start sites showed good homology to the consensus sequences for promoter elements of sigma(F)-de
185 katA is a sequence that closely matches the consensus sequence for promoters regulated in Escherichi
188 cent protein (GFP)-TOP1 corresponding to the consensus sequence for protein sumoylation (PsiKXE, wher
190 surrounding phosphotyrosine 317 matches the consensus sequence for recognition by the phosphotyrosin
191 the T-arm of tRNA and constructed a minimal consensus sequence for RUMT recognition and catalysis.
192 lerated within the stem-loop-forming genomic consensus sequence for self-catalyzed site-specific depu
195 d N-terminal polyproline regions fitting the consensus sequence for SH3 domain ligands, and a YDYV mo
196 tored the binding selectivity to the general consensus sequence for SH3 domains, the PXXP motif.
197 ion in SIV Nef was strikingly similar to the consensus sequence for SH3 ligand domains possessing the
198 ed genes in the sigH regulon with a putative consensus sequence for SigH binding that was recognized
201 experiments with oligonucleotides containing consensus sequences for Sp1 and AP-1 binding identified
202 omoter contains 1-base pair (bp) overlapping consensus sequences for Sp1 and MAZ transcription factor
203 to the CH exons from another locus by using consensus sequences for splicing donor and acceptor site
205 hese two tyrosine residues are surrounded by consensus sequences for Src homology 2 (SH2) domain bind
206 , contain a proline-rich region that matches consensus sequences for Src homology 3 (SH3) ligands.
210 eness to GnRH-2 (SURG-2), which contains the consensus sequence for the activating protein-1-binding
211 a fluorescein-labeled decoy ODN containing a consensus sequence for the AP-1 transcription factor, we
212 tinct LexA binding sites reveals an expanded consensus sequence for the B. subtilis operator: 5'-CGAA
215 Altering the enhancer pyrimidine tract to a consensus sequence for the binding of U2AF eliminated en
216 sing an oligonucleotide corresponding to the consensus sequence for the biotin-binding motif, two unl
218 E, 5'-TGACGTCA-3', has been described as the consensus sequence for the cis-element that directs cAMP
219 cleaved within the gamma2 chain matches the consensus sequence for the cleavage of type I, II, and I
221 ted species allowed us to deduce an expanded consensus sequence for the compositionally unusual promo
222 pe 1 repeats (TSR), seven of which contain a consensus sequence for the direct addition of fucose to
223 ly transcribed flagellar promoters possess a consensus sequence for the DNA-binding protein integrati
224 of homology to each other as well as to the consensus sequence for the Escherichia coli Fur protein.
225 To assay the genomic DNA, we established a consensus sequence for the first 12 kb of the COL1A1 gen
227 ulting structural changes alter the adjacent consensus sequence for the guanine ring binding of GDP/G
228 the major start site P1 is dependent upon a consensus sequence for the housekeeping sigma factor Sig
229 transcribed from promoters containing a new consensus sequence for the human initiator (Inr) core pr
230 r purine and Y stands for pyrimidine, as the consensus sequence for the KCS element, both for basal a
231 395 and threonine 1179) contained a perfect consensus sequence for the mitogen-activated protein kin
234 yotic and eukaryotic P5CRs is similar to the consensus sequence for the NAD(P)H-binding site of other
235 b and Ec core sequences are identical to the consensus sequence for the nuclear hormone receptor supe
236 id sequence shows regions of homology to the consensus sequence for the peptidyl carrier protein (PCP
237 he purified protein and the other based on a consensus sequence for the phosphorylation site of P-typ
239 h residues 17 to 21 (L-A-A-C-S) matching the consensus sequence for the prolipoprotein cleavage site
240 The Alu sequence was less similar to the consensus sequence for the PV or Sb2 subfamilies, subfam
243 promoters have excellent matches to the -10 consensus sequence for the sigma 70 subunit of Escherich
244 contained a GC-rich region consistent with a consensus sequence for the SP1 family, that was sufficie
245 seven conserved tyrosines, a phosphorylation consensus sequence for the Src family of tyrosine kinase
246 alysis predicts a COOH-terminal (E/Q)(S/T)XV consensus sequence for the strongest binding to the firs
247 vivo binding sites have a weak match to the consensus sequence for the transcription factor being an
249 ine phosphorylation are also present, as are consensus sequences for the binding of SH2 and PDZ domai
251 of a TATA-box, a high GC region, and several consensus sequences for the binding of transcription fac
255 BP-1 gene structure revealed three potential consensus sequences for the hypoxia response element (HR
256 bling EST sequences to produce high-fidelity consensus sequences for the represented genes (F.L. et a
257 and antagonists on Muc-1 expression, because consensus sequences for the response elements of these s
259 genome were sufficient to provide functional consensus sequences for the THAP domains, they do not sp
260 .1% identity of nt sequences and contain the consensus sequences for the transcription factors AP-2 a
263 ed and oriented using known genes, BAC ends, consensus sequences for transcript assemblies, and compa
264 nt DNA-protein complex that was abolished by consensus sequence for transcription factor ZNF143/76 or
265 ations identified were in close proximity to consensus sequences for transcription control elements w
267 site of human PPT-I promoter and identified consensus sequences for two cAMP response elements (CRE)
268 henylalanineCOOH, that closely resembles the consensus sequence for type-1 peroxisomal targeting sign
270 nine replacement of three tyrosines within a consensus sequence for tyrosine sulfation abolished bind
272 recognize several DNA substrates without the consensus sequence for YY1 in vitro, and DNA binding is
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