コーパス検索結果 (1語後でソート)
通し番号をクリックするとPubMedの該当ページを表示します
1 n from F1 structures 2HLD1 and 1H8E (Protein Data Bank).
2 sion), and structural data from PDB (Protein Data Bank).
3 ctures of epigenome readers from the Protein Data Bank.
4 ty rates using data from the National Trauma Data Bank.
5 torial analyses of each entry in the Protein Data Bank.
6 resolution ribozyme structure in the Protein Data Bank.
7 homologous structure families in the Protein Data Bank.
8 centers participating in the National Trauma Data Bank.
9 mistic thin filament models from the Protein Data Bank.
10 ives provided by the National Practitioner's Data Bank.
11 1 structure has no equivalent in the Protein Data Bank.
12 American College of Surgeons National Trauma Data Bank.
13 2707 different ligand types from the Protein Data Bank.
14 lergens and proteins reported in the Protein Data Bank.
15 t as well as structure data from the Protein Data Bank.
16 tem, and mirrors the contents of the Protein Data Bank.
17 -antigen cocrystal structures in the Protein Data Bank.
18 , and a bioinformatics screen of the Protein Data Bank.
19 ed in the structural database of the Protein Data Bank.
20 in spectra in the Protein Circular Dichroism Data Bank.
21 res, designated 2JMH and 2JRK in the Protein Data Bank.
22 taining molecules deposited into the Protein Data Bank.
23 tribute complications to the National Trauma Data Bank.
24 t study of patients from the National Trauma Data Bank.
25 that are made available through the Protein Data Bank.
26 all known protein structures in the Protein Data Bank.
27 ed from 99 polypeptide chains in the Protein Data Bank.
28 for at least one member exist in the Protein Data Bank.
29 tinct GroEL crystal structure in the Protein Data Bank.
30 h of structures now available in the Protein Data Bank.
31 ligands--currently available in the Protein Data Bank.
32 pockets in >26,000 structures in the Protein Data Bank.
33 tients were entered into the National Trauma Data Bank.
34 crystal and NMR structures from the Protein Data Bank.
35 ion intermediate structures from the Protein Data Bank.
36 37 have folds not represented in the Protein Data Bank.
37 in unique antibody structures in the Protein Data Bank.
38 ds from similar binding sites in the Protein Data Bank.
39 a Bank and map-derived models in the Protein Data Bank.
40 aptured by hundreds of structures in Protein Data Bank.
41 ures determined and deposited to the Protein Data Bank.
42 ycine amino acids in proteins in the protein data bank.
43 extracted from the 2007-2012 National Trauma Data Bank.
44 eir sources: DrugBank, BindingDB and Protein Data Bank.
45 the prospectively maintained National Trauma Data Bank.
46 ndly and is integrated into the RCSB Protein Data Bank.
47 ay structures of DNA duplexes in the Protein Data Bank.
48 e Control and Prevention and National Trauma Data Bank.
49 itor, acetazolamide, is available in Protein Data Bank.
50 Informatisees et Validees en Transplantation data bank.
51 structures of human proteins in the Protein Data Bank.
52 ther proteins and mRNAs are described in the data banks.
53 ESV proteins found no matches in the protein data banks.
56 matching substructures in the entire Protein Data Bank, along with a statistical significance estimat
57 tructures, and databases such as the Protein Data Bank, also implies large scale structural similarit
59 able PPI structures deposited in the Protein Data Bank and allows users to upload their own custom st
60 onto TM helix dimers parsed from the Protein Data Bank and by selecting conformations based on their
61 protein complexes retrieved from the Protein Data Bank and created the DNAproDB database to store thi
63 ural data archives, which include maps in EM Data Bank and map-derived models in the Protein Data Ban
67 helices across RNA junctions in the Protein Data Bank and rationalized our findings with modeling an
68 0 crystal data sets deposited in the Protein Data Bank and show that sharpening improves the electron
70 lly from the current releases of the Protein Data Bank and the Uniprot Knowledgebase; this core is co
71 whose structure is available in the Protein Data Bank and which exhibits one or more helices at the
72 ures in test sets extracted from the Protein Data Bank and would be useful starting points in modelin
73 main protein structures found in the Protein Data Bank) and ART structures and pockets, the widesprea
74 olecular structures available in the Protein Data Bank archive and the tools that are available at th
75 ximately 2% of the structures in the Protein Data Bank are from eukaryotic parasites and less than 0.
77 s in the protein simulations and the Protein Data Bank are very similar and often distinct from those
78 structures have been archived in the Protein Data Bank as compared to the more than 100 000 structure
79 uncertainty for both SN within the Emissions Data Bank as well as nvPM mass within the new regulatory
80 me, GTK/KAT I, is listed in mammalian genome data banks as CCBL1 (cysteine conjugate beta-lyase 1).
82 ved from structures deposited in the Protein Data Bank, based on sequence similarly, fit of stem atom
83 nificant result that agrees with our Protein Data Bank-based backbone sampling and all-atom simulatio
84 to many such situations and combines Protein Data Bank-based torsional optimization with real-space r
88 results of analysing proteins in the Protein Data Bank by this new scheme, recovering and extending p
89 Here using a large whole-genome sequencing data bank, cancer registry and colorectal tumour bank we
91 ydroxy-3,5-dimethylphenyl)methanone (Protein Data Bank chemical component 0XV) was determined to 2.87
92 abundant and underrepresented in the Protein Data Bank class of 2-4 TM crossers and demonstrate the e
93 he peptide contained residues 20-45 (Protein Data Bank code 1BEA), and a C29D substitution was includ
95 small molecule effector salicylate (Protein Data Bank code 3DEU), reveal that, unlike many other Mar
97 erichia coli isoprenoid synthesis H (Protein Data Bank code 3F7T) as a template for homology modeling
98 catalytic domain crystal structure (Protein Data Bank code 3IR2); however, atomic force microscopy a
99 -yl)-2-(pyridin- 3-yl)ethanone (UDO; Protein Data Bank code 3ZG2) and N-[4-(trifluoromethyl)phenyl]-N
101 s 2C8 and 2C9, the atomic structure (Protein Data Bank code 4GQS) of cytochrome P450 2C19 complexed w
102 n all nucleic acid structures in the Protein Data Bank confirm the efficiency and robustness of the s
103 rvey of two-way RNA junctions in the protein data bank confirms that junction residues have a strong
105 DRoP reads and superimposes multiple Protein Data Bank coordinates, transfers symmetry-related water
107 onding drug-target structures in the Protein Data Bank database, and 15 out of the 18 had been proved
109 of protein-protein complexes in the Protein Data Bank, docking templates can be found for complexes
111 ives containing EM-based structural data: EM Data Bank (EMDB) and Protein Data Bank (PDB), and facili
113 iously reported structures of ba(3) (Protein Data Bank entries 1EHK and 1XME ), having a crystallogra
114 of D12A BsPFK have been determined (Protein Data Bank entries 4I36 and 4I7E , respectively), and bot
117 rotein structure (residues 15 to 41; Protein Data Bank entry 1CWX) indicated that the residues G33 an
118 the crystal structure of rhodopsin (Protein Data Bank entry 1GZM), the experimentally measured dista
119 solved structure of MMP-3cd.TIMP-1 (Protein Data Bank entry 1UEA), we see substantial differences at
120 P450 3A4 (CYP3A4) crystal structure (Protein Data Bank entry 1W0E) to predict the sites of metabolism
124 cture of the archaeal NCX homologue (Protein Data Bank entry 3V5U ), we introduced cysteine residues
125 structure bound to PEP is reported (Protein Data Bank entry 4I4I ), and it exhibits a shifted struct
126 ucleotide Archive (ENA), UniProt and Protein Data Bank, Europe (PDBe), we demonstrate that text minin
127 sult holds for all structures in the Protein Data Bank, even when structural relationships between ev
128 e structure factors derived from the Protein Data Bank, explicit treatment of water molecules in the
131 web server that searches the entire Protein Data Bank for a given substructure defined by a set of a
132 claims reported to the National Practitioner Data Bank for events in the outpatient setting was simil
133 t, we successfully screen the entire Protein Data Bank for proteins that possess local surface simila
134 gands for hundreds of targets in the Protein Data Bank for which similar experimental information is
139 on-capsid protein complexes from the Protein Data Bank found 418 generic protein-protein interfaces t
140 0 to 17 years old using the National Trauma Data Bank from January 1, 2007, to December 31, 2012.
141 e carried out a broad search of RIP sequence data banks from angiosperms in order to study their main
143 (varphi,psi) distributions from the Protein Data Bank further justifies the inclusion of many-body e
144 e of the valuable information in the Protein Data Bank generated by structural genomics projects but
145 non-redundant OMBB structures in the Protein Data Bank, half have been solved during the past 5 years
146 te of novel pockets deposited in the Protein Data Bank has been decreasing steadily over the recent y
147 t a quarter of all structures in the Protein Data Bank; however, available protein complexes cover le
148 he published IpaD crystal structure (Protein Data Bank ID 2j0o) how a multimer of IpaD would be incor
150 reviously determined NTR1 structure (Protein Data Bank ID code 4GRV) in the ligand-binding pocket and
151 m formin binding protein 28 (FBP28) (Protein Data Bank ID: 1E0L) and its full-size, and singly- and d
156 MDataBank.org, a joint effort of the Protein Data Bank in Europe (PDBe), the Research Collaboratory f
161 tatic structures of a protein in the Protein Data Bank in order to extract the progression of structu
166 rs participating in the 2010 National Trauma Data Bank (January 1 to December 31, 2010) were used to
167 tures are currently available in the Protein Data Bank, largely owing to inefficiencies in protein pr
170 ,229 injured patients in the National Trauma Data Bank (NTDB 6.1) hospitalized between 2001 and 2005.
171 ents from 2003 to 2015), the National Trauma Data Bank (NTDB) (5755095 patients from 2003 to 2014), a
175 crystal structures deposited in the Protein Data Bank of 32 different receptors from families scatte
176 uropean Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage.
177 uropean Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage.
178 uropean Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage.
179 uropean Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage.
180 uropean Nucleotide Archive (ENA) and the DNA Data Bank of Japan (DDBJ) ensures worldwide coverage.
181 Bioinformatics Institute (EBI), and the DNA Data Bank of Japan (DDBJ), have established the Sequence
187 And thanks in part to the large Protein Data Bank of known structures, predicting protein struct
189 actively working with its Worldwide Protein Data Bank partners to enhance the quality and consistenc
190 he entries in the Protein Circular Dichroism Data Bank (PCDDB) for its comparison set, providing the
194 ere are few pMHC-I structures in the Protein Data Bank (PDB) (especially considering the total number
195 spatial information available in the Protein Data Bank (PDB) along with the mutational data in the Ca
196 However, with the steady growth of Protein Data Bank (PDB) and available PTM sites, it is now possi
197 cy set of RNA 3D structures from the Protein Data Bank (PDB) and calculate centroids (exemplars) for
198 and binding sites extracted from the Protein Data Bank (PDB) and small organic molecules from the Cam
199 xample, by combining the data in the Protein Data Bank (PDB) and the Catalogue of Somatic Mutations i
200 ating the spatial information in the Protein Data Bank (PDB) and the mutational data in the Catalogue
201 In ProtCID, protein chains in the protein data bank (PDB) are grouped based on their PFAM domain a
203 re of the crystal structure of ELIC [Protein Data Bank (PDB) code 2VL0], a bacterial member of the ni
204 d structural comparisons against the Protein Data Bank (PDB) combined with a rich and intuitive user
206 mparisons in seconds from a complete Protein Data Bank (PDB) database of 152,959 protein chains and t
207 complexes currently available in the Protein Data Bank (PDB) database, revealing a great diversity of
208 ation of interfaces across different Protein Data Bank (PDB) entries in a protein family reveals seve
209 ease of SCOPe, 2.03, contains 59 514 Protein Data Bank (PDB) entries, increasing the number of struct
211 g loop (LL conformation), similar to Protein Data Bank (PDB) entry 1CMK , and a helix-turn-helix stru
212 developed to simplify the reading of Protein Data Bank (PDB) files containing glycans through the aut
213 reate the RNA CoSSMos database, 2156 Protein Data Bank (PDB) files were searched for internal, bulge
216 s in structured RNA molecules in the Protein Data Bank (PDB) hydrogen-bond with phosphates of other n
217 spatial structures maintained by the Protein Data Bank (PDB) into evolutionary groups of protein doma
220 easy downloads of IBIS data for all Protein Data Bank (PDB) protein chains and the results for each
222 available Apo EPK structures in the protein data bank (PDB) revealed four unique structural conforma
223 et al., using the limited number of protein data bank (PDB) structures available at that time, repor
224 can be used for databases other than Protein Data Bank (PDB) such as Protein families database or Clu
225 rization of 10,245 beta-turns in the protein data bank (PDB) suggested that trans-pyrrolidine-3,4-dic
226 n programming interface for the RCSB Protein Data Bank (PDB) that allows search and data retrieval fo
227 trieve structural fragments from the Protein Data Bank (PDB) that are very similar to the peptide's f
229 in crystal structures present in the Protein Data Bank (PDB) with a focus on PDE-ligand interactions.
230 central access to structures in the Protein Data Bank (PDB), along with functional annotations, asso
231 ctural data: EM Data Bank (EMDB) and Protein Data Bank (PDB), and facilitates use of EM structural da
232 crystal structures deposited in the Protein Data Bank (PDB), but only 50% of structures in the PDB a
236 tabase (MMDB), which is based on the Protein Data Bank (PDB), maintains a comprehensive and up-to-dat
237 100 000 structures available in the Protein Data Bank (PDB), of which approximately 30% are protein-
238 twork has at least two structures in Protein Data Bank (PDB), only 22% of them have alternative confo
239 th the continuous growth of the RCSB Protein Data Bank (PDB), providing an up-to-date systematic stru
240 ) and the spatial information in the Protein Data Bank (PDB), SpacePAC is able to identify novel muta
241 ctural knowledge, extracted from the Protein Data Bank (PDB), underlies numerous potential functions
260 sting data based on crystallography (Protein Data Bank, PDB) can be used to discriminate between inte
261 f pre-calculated matches between all Protein Data Bank proteins and the library of catalytic sites.
262 r-specified catalytic site among all Protein Data Bank proteins rapidly (in less than a minute).
265 3D structures that are found in the Protein Data Bank, providing interaction data at the molecular l
266 of domain-domain interactions in the Protein Data Bank, providing molecular details for such interact
267 NMR) techniques and deposited in the Protein Data Bank, rather than on ensembles specifically generat
268 ratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) develops tools and resources that p
270 ratory for Structural Bioinformatics Protein Data Bank (RCSB PDB) resource provides tools for query,
272 protein structures deposited in the Protein Data Bank resulted in 874 entries, consisting of 194 uni
273 he Cambridge Structural Database and Protein Data Bank reveal geometric preferences of some oxygen an
274 luding unpublished structures in the Protein Data Bank, revealed extensive variation in the relative
275 of a TEL fragment, deposited in the Protein Data Bank, revealed that the CID consists of two alpha-h
276 her examination of structures in the Protein Data Bank reveals that there is a great disparity betwee
278 einaceous tryptophans taken from the Protein Data Bank shows that sterically hindered ranges of dihed
279 grated computational approach of the Protein Data Bank structure analysis and atomistic molecular dyn
281 ystematically maps human nsSNPs onto Protein Data Bank structures and annotates several biologically
285 alis alpha-actinin epitopes with proteins in data banks, such as Tritrichomonas suis, Candida albican
286 ogether molecular fragments from the Protein Data Bank that best fit experimental RDCs from samples w
287 ratory for Structural Bioinformatics Protein Data Bank, the US data center for the global PDB archive
288 f membrane protein structures in the Protein Data Bank, there are many transmembrane domains that app
289 uses similarity to sequences in the Protein Data Bank to infer annotations at the output level, and
290 of helical protein interfaces in the Protein Data Bank to obtain a snapshot of how helices that are c
291 cluding PubMed, UniProt and the RCSB Protein Data Bank, to provide multi-faceted views of polymerase
292 umber of unique binding sites in the Protein Data Bank was much slower than the growth rate of the nu
294 Using data from the National Practitioner Data Bank, we analyzed 66,426 claims paid against 54,099
295 n-DNA complexes now available in the Protein Data Bank, we argue that individual DNA-binding proteins
296 centers participating in the National Trauma Data Bank were identified using International Classifica
297 mination of protein complexes in the Protein Data Bank where alpha-helices or beta-strands form criti
298 ECTS: Trauma patients in the National Trauma Data Bank with a hospital length of stay greater than 2
WebLSDに未収録の専門用語(用法)は "新規対訳" から投稿できます。