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1 ghts into how TET and TDG mediate active DNA demethylation.
2 e Treg phenotype characterized by FOXP3 TSDR demethylation.
3 ination does not contribute substantially to demethylation.
4 basic product dissociation during active DNA demethylation.
5 sion repair (BER) in the framework of active demethylation.
6 methylcytosine (5hmC), which can lead to DNA demethylation.
7 replication independent processes of active demethylation.
8 st-order rate potentials for methylation and demethylation.
9 d of care, mesna or nicotinamide-induced DNA demethylation.
10 ion (TET) family of dioxygenases can lead to demethylation.
11 ing the female pronucleus from TET3-mediated demethylation.
12 ay a role in gene expression mediated by DNA demethylation.
13 lcytosine (5hmC), are essential for cytosine demethylation.
14 DNA methylation and ROS1-mediated active DNA demethylation.
15 al roles in DNA base excision repair and DNA demethylation.
16 ng at CGIs, is correlated with TET1-mediated demethylation.
17 on is partly maintained by TET2-mediated DNA demethylation.
18 genases that are involved in DNA and histone demethylation.
19 ndritic-cell-specific or macrophage-specific demethylation.
20 en peroxide in the nucleus as a byproduct of demethylation.
21 mC, but also initiates active or passive DNA demethylation.
22 idized methylcytosines, intermediates in DNA demethylation.
23 -regulating Tet1 and Tet2, which promote DNA demethylation.
24 ion (TET) family members regulate active DNA demethylation.
25 DNA glycosylase ROS1, which facilitates DNA demethylation.
26 lase-1 (LSD1) has been shown to promote H3K9 demethylation.
27 The mammalian TET enzymes catalyze DNA demethylation.
28 onji C domain-containing protein 6) to G3BP1 demethylation.
29 stream of the JmjC domain do not disrupt UTX demethylation.
30 central role of BER in mediating active DNA demethylation, a multistep process that erases the epige
32 MeHg exported from upstream wetlands due to demethylation, absorption, deposition, and degradation b
33 intained equilibrium between methylation and demethylation activities is required to ensure long-term
35 ry (Hg) methylation and methylmercury (MMHg) demethylation activity of periphyton biofilms from the i
36 namic connection between FTO RNA binding and demethylation activity that influences several mRNA proc
39 Treatment with 5-aza-2'-deoxycytidine, a demethylation agent, and knockdown of DNA methyltransfer
42 n by coordinating efficient TDG-mediated DNA demethylation along with active transcription during som
44 Structure-activity analysis revealed that N-demethylation alters the interaction of PK11195 with the
45 including a JmjC domain that catalyzes H3K36 demethylation and a CxxC zinc-finger that recognizes CpG
46 osteoblast differentiation as it impairs DNA demethylation and alters the recruitment of histone meth
47 ent utilization of LigM as a tool for aryl O-demethylation and as a component of synthetic biology ef
51 1-dependent enhancers and mediates local DNA demethylation and concomitant histone 3 lysine 4 methyla
52 ropionic acid derivatives via hydrogenation, demethylation and dehydroxylation to give metabolites th
54 pposition to 5mCG, resulting in "functional" demethylation and diminished MeCP2 binding, thus facilit
57 e acquisition of the dendritic-cell-specific demethylation and expression signature, following STAT6
60 asferase EZH2, TET2 a key factor in cytosine demethylation and inactive DNMT3L, shown by knockdown as
62 of IDH mutant glioma was associated with DNA demethylation and poor outcome; a group of IDH-wild-type
63 tal period, we demonstrated that both global demethylation and remethylation in early development cor
64 periments from "IDH mutation impairs histone demethylation and results in a block to cell differentia
65 ntage of its recently discovered role in DNA demethylation and selective recognition and repair of 5-
66 ut ascorbate (vitamin C), which promotes DNA demethylation and subsequently changes the sensitivity t
68 thyltransferase Dnmt1 induces widespread DNA demethylation and transcriptional activation of ERVs, in
69 iting Wnt signaling, partly through promoter demethylation and transcriptional activation of the Wnt
70 direct connections between TET-mediated DNA demethylation and transcriptional output are difficult t
71 rehensive transcriptome-wide analysis of RNA demethylation and uncover FTO as a potent regulator of n
72 ogression, in part, through the specific DNA demethylation and upregulation of epidermal growth facto
73 tically, peripheral nerve injury induces DNA demethylation and upregulation of multiple regeneration-
75 5hmC), providing an active mechanism for DNA demethylation, and it may also provide its own regulator
76 ins expression of KLF2 and IRF4 through H3K9 demethylation, and knockdown of KLF2 triggers apoptosis.
79 lly, we show that the main drivers of global demethylation are neither active mechanisms (Aicda, Tdg,
80 umor type, both CGI methylation and backbone demethylation are often associated with clinical, epidem
88 lecular rheostat selectively regulating H3K9 demethylation at cell cycle gene loci, thereby represent
90 We found that ThymoD transcription promoted demethylation at CTCF bound sites and activated cohesin-
94 [i.e., forced swimming (FS)] results in DNA demethylation at specific CpG (5'-cytosine-phosphate-gua
97 cated as intermediates on the path to active demethylation, but recent reports have suggested that th
98 wn of JMJD6 repressed SG formation and G3BP1 demethylation, but SG formation and G3BP1 demethylation
100 t TET2, a cellular enzyme that initiates DNA demethylation by converting 5-methylcytosine (5mC) into
101 f TET2, a cellular enzyme that initiates DNA demethylation by converting 5-methylcytosine (5mC) into
102 ect is likely the result of both passive DNA demethylation by DNMTi and active conversion of 5-methyl
103 ution of the TTD to the catalysis of H3K9me3 demethylation by KDM4C and demonstrated that TTD-mediate
105 argeting protein, UHRF1, can augment the DNA demethylation capacities of existing DNA methylation inh
107 exogenous source of alphaKG restored the DNA demethylation cycle by promoting TDG function, TET1 nucl
108 fications to cytosine in the proposed active demethylation cycle is demonstrated at the single-molecu
109 Restoring the epimetabolic control of DNA demethylation cycle promises beneficial effects on cells
111 d by enzymatic reactions including oxidative demethylation/deamination and myeloperoxidation, it is u
113 of all SALL4 exons increased, suggesting CpG demethylation downstream from SALL4 TSS influences SALL4
116 chromatin formation pathways, whereas global demethylation during germination occurs in a passive man
120 at comprehensively describes DNA methylation/demethylation events in two neuronal lineages, with a to
124 T cell-specific demethylation region (TSDR) demethylation, FOXP3 expression, and suppression were an
125 d streptozotocin mice eliciting, in HFD, DNA demethylation, glucose uptake, and insulin response.
126 d hypoxia-inducible factor alpha (HIF1alpha) demethylation has recently been proposed, the effect of
127 Therefore, bypassing stage-specific DNA demethylation has significant consequences for progenito
128 epigenetic mark produced through active DNA demethylation, has not been previously investigated in F
129 We sought to investigate the role of DNA demethylation in activating inflammasome genes during ma
131 g et al. (2017) reveal a role for active DNA demethylation in allowing axon regeneration to occur in
133 recapitulated the process of genome-wide DNA demethylation in embryonic PGCs, including significant d
134 ce of events leading to direct gene-specific demethylation in innate immune cell differentiation.
135 overall methylation in CpG island (CGI) and demethylation in intergenic regions, defined as 'backbon
137 mportantly, the maintenance of PD-1 promoter demethylation in memory CD8 T cells was coupled with imp
138 nal significance of cytosine methylation and demethylation in mouse embryogenesis remains to be fully
140 establish the molecular mechanism for global demethylation in naive ESCs, which has key parallels wit
142 nal development, the role of DNA methylation/demethylation in neuronal lineage and subtype specificat
143 odulates Lefty-Nodal signalling by promoting demethylation in opposition to methylation by DNMT3A and
144 biological relevance of DNA methylation and demethylation in plant immunity against nonviral pathoge
145 , highlights an unexpected importance of Ddo demethylation in preventing neurodegenerative processes
147 accelerator of global and locus-specific DNA demethylation in somatic and pluripotent stem cells.
148 However, the requirement for active H3K27 demethylation in stem cell-mediated tissue regeneration
149 ible yet elusive role of DNA methylation and demethylation in systemic immune responses, transgenerat
151 nisms and critical functional players of DNA demethylation in this process remain largely unexplored.
153 more, the biological functions of active DNA demethylation in various biological contexts have also b
157 tumor suppressor p15(INK4B) through promoter demethylation; in turn, DNMT1 dysfunction impairs KIT ki
158 to the c-Myc gene enhancer and induced H3K9 demethylation, increasing AR-dependent transcription of
161 NAs are involved in an immediate response to demethylation-induced transposon activation, while the d
162 loped to map the genomic distribution of the demethylation intermediates 5-formylcysotine (5fC) and 5
163 domain prevents large SG assembly and rapid demethylation is a novel signal that regulates SG format
164 out of the Eed subunit of PRC2 indicate that demethylation is a rate-limiting step in the activation
167 lls (SCs) and demonstrated that active H3K27 demethylation is necessary for muscle regeneration.
170 ctivation of naive and memory cells and that demethylation is the predominant change to H3K27me3 at t
171 licated in hydroxymethylation and active DNA demethylation, is a key regulator of EBV latency type DN
174 In CRC cell lines, we demonstrated that EREG demethylation led to its transcriptional upregulation, h
175 Emerging evidence suggests that active DNA demethylation machinery plays important epigenetic roles
176 has a strong impact on replication dependent demethylation, mainly by impairing methylation maintenan
177 as consistent with our previous finding that demethylation may cause regain of PRC2 in demethylated r
178 ng sequence, supporting that this active DNA demethylation mechanism functions during oncogenic trans
179 We also show that DDB2 regulates active DNA demethylation mediated by REPRESSOR OF SILENCING 1 (ROS1
180 d by decreased nucleosome enrichment and DNA demethylation mediated by SWI/SNF- and Tet1/Tet2-contain
181 gulation of EREG expression through promoter demethylation might be an important means of activating
182 providing chloride for post-rate-determining demethylation/neutralization of the resulting zwitterion
186 but the mechanism by which TDG-dependent DNA demethylation occurs in a rapid and site-specific manner
188 etion of TDG suggest TET/TDG-mediated active demethylation occurs preferentially at intron-exon bound
189 of antiangiogenic miR-221 by GATA2-dependent demethylation of a putative CpG island in the miR-221 pr
190 onstrate that fumarate inhibits Tet-mediated demethylation of a regulatory region of the antimetastat
191 second study, we performed global, chemical demethylation of A253 cells and found that demethylation
198 l hypomethylated state and site specific DNA demethylation of enhancer elements within the proximal p
200 ting in dissociation of CRTC2, LSD1-mediated demethylation of gene-activation histone marks H3K4-me2/
201 y in the molecular and Purkinje cell layers, demethylation of genome-wide repetitive LINE-1 elements,
202 B by the SAGA complex as well as restricting demethylation of H3 and increasing its acetylation.
205 D-mediated recognition of H3K4me3 stimulates demethylation of H3K9me3 in cis on peptide and mononucle
207 L-4; and, accordingly, were characterized by demethylation of IL4, IL13, IL5, GATA3, and RORC2, where
208 ion in embryonic PGCs, including significant demethylation of imprint control regions (ICRs) associat
216 uals, little is known about when this stable demethylation of PD-1 promoter DNA is programmed during
219 ed HCCs expressing increased SALL4 exhibited demethylation of specific CpG sites downstream of SALL4
220 development is accompanied by extensive DNA demethylation of specific sites that vary between cell t
223 Monocytes showed an even more extensive demethylation of the FUT7 gene whereas hepatocytes, whic
228 model system, we found a correlation between demethylation of the promoter induced by the treatment,
233 HepG2 cells derived from human HCC exhibit demethylation of these NF-kappaB-flanking CpG sites, and
234 phenotype, abrogated the activation-induced demethylation of this region, which contains a cAMP resp
236 oma-carcinoma transition was associated with demethylation of two key sites within its promoter, and
237 the VAV1 gene body that was correlated with demethylation of two promoter CpGs (CpG6772370/CpG677281
239 Our results demonstrate that incomplete demethylation on the SRY gene is the driving cause of XY
241 lved in cellular signalling activities while demethylations particularly linked to functions of the e
244 n at unprecedented detail, quantifies active demethylation pathways and reveals 5hmC localization in
248 ular tumor suppressor involved in active DNA demethylation, plays a central role in regulating the DN
250 ion by replication dependent and independent demethylation processes has been suggested to be influen
251 of our work is that the neuronal methylation/demethylation program is predominantly developmental wit
252 eriod after repair, transcription-associated demethylation promoted by Base Excision Repair enzymes f
253 re also repaired by AlkB-catalyzed oxidative demethylation, providing a potential alternative mechani
261 ion (TET) family of dioxygenase-mediated DNA demethylation requires new methods to quantitatively map
262 3) and transposable elements are enriched at demethylation-resistant regions, while active chromatin
263 ylated ros1 mutant, which is affected in DNA demethylation, revealed that their opposite resistance p
270 es are reported to have a role in active DNA demethylation through 5mC oxidation and DNA repair, amon
271 ence somatic gene expression and dynamic DNA demethylation to activate pluripotency gene transcriptio
272 sis factor-alpha activates RelA, propagating demethylation to nearby CpG sites, shown by sodium bisul
274 ic barrier that can be removed by active DNA demethylation to permit axon regeneration in the adult m
275 et1 and Jhd2 via modulating H3K4 methylation-demethylation together control chromatin dynamics during
276 addition, the supernatant of the cells after demethylation treatment displayed an enhanced ability of
279 ethods for the genomic mapping of active DNA demethylation using limited numbers of cells or single c
282 s have also been proposed to function in DNA demethylation via deamination of either 5-methylcytosine
287 ted expression of H19 lncRNA due to promoter demethylation was observed in cells isolated from metast
288 se 2 (TET2) and nuclear factor kappaB to DNA demethylation was tested by using chromatin immunoprecip
289 et1, a tumor suppressor involved in cytosine demethylation, we observed a similar loss of promoter co
291 P1 demethylation, but SG formation and G3BP1 demethylation were rescued with catalytically active but
292 ndent repair of DNA lesions arising from DNA demethylation, which prevents zygotes carrying unrepaire
293 and chromatin organization by way of histone demethylation, which provides a means to regulate the ac
294 19p gain and polycomb features, and backbone demethylation with chromosomal instability, NSD1 and TP5
295 muM, respectively, catalyzing sterol 14alpha-demethylation with respective turnover numbers of 1.7 mi
297 man CD4(+) effector memory T cells confirmed demethylation within FUT7 corresponding to high FUT7 exp
300 ion of DMABN mainly proceeded (>72%) through demethylation yielding N-methyl-4-cyanoaniline and forma
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