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1 and in an activated precursor state (G8:2'OH deprotonated).
2 gap of the K-channel analog only while being deprotonated.
3 e under conditions where the side chains are deprotonated.
4 carboxylic acid and phenol moieties, become deprotonated.
5 ation, which explains why the chromophore is deprotonated.
6 ved species wherein the carboxylate group is deprotonated.
7 its ability to be reversibly protonated and deprotonated.
8 cost, in MCP and MCP-GpA dimers, Lys-40 gets deprotonated.
9 ic effects of bile salts by maintaining them deprotonated.
10 diates when the oxidized phenolic side chain deprotonates.
11 glutamate encounters the matrix channel and deprotonates.
12 A sequence of epoxide ring opening using N-deprotonated 1,2-azaborines followed by an intramolecula
15 races of the pentahydrazine upon reaction of deprotonated 2-oxa-6-azaadamantane with 2,6-dichloro-2,6
16 and [Pt(C(wedge)N)Cl(dppm)] (2), (C(wedge)N. deprotonated 2-phenylpyridine; dppa. bis(diphenylphosphi
17 leophilic substitution of a fluoroarene with deprotonated 3-methyl-4-piperidinenitrile giving the (3R
18 n subjected to ion/ion reactions with doubly deprotonated 4-formyl-1,3-benzenedisulfonic acid (FBDSA)
20 bute as conserved elements to the binding of deprotonated 8-HDF and allow predicting 8-HDF binding fo
21 The first triad, Thr12-Lys162-Asp90, acts by deprotonating a water molecule that subsequently binds t
22 for the negative clusters it is carried by a deprotonated acid; the same is true for the neutral clus
23 her solubility in toluene) to more uniformly deprotonate acidic components of complex mixtures by neg
25 tramethylpiperidide), a template base as its deprotonating action is dictated primarily by its 12 ato
26 purity (up to 98% ee) by alpha-alkylation of deprotonated alpha-aminonitriles derived by the Strecker
28 sence of a larger population of the reactive deprotonated amides for Ar = C6F5), (3) "Cs2-I-F" cluste
31 II))1:((-)OCH3) can act as a general base to deprotonate an attacking solvent molecule in the case of
32 yte ions (M + H)(+) in positive ion mode and deprotonated analyte ions (M - H)(-) in negative ion mod
33 carboxylic acid and an amine base, which can deprotonate and protonate respectively depending on the
34 es a group with a pK(a) of 6.6 +/- 0.2 to be deprotonated and a second group with a pK(a) of 9.5 +/-
36 ndance (13)C NMR that the lipid in HAMLET is deprotonated and by chromatography that oleate rather th
37 ional movement out of the channel when it is deprotonated and by its high pKA value when it points in
38 cid is first physisorbed on bismuth and then deprotonated and chemisorbed in formate form, also on bi
39 an be redissolved, and the DMB ligand can be deprotonated and exchanged for benzene to produce the de
40 ir is most useful when the His side chain is deprotonated and is, thus, complementary to the Trp-His
42 readily available ethyl 4-bromocrotonate is deprotonated and trapped with Ellman imines selectively
43 te is essential for splicing, most likely by deprotonating and activating the downstream nucleophile
44 veal that electron pair repulsion within the deprotonated anion is not the reason behind the lack of
47 ( approximately 1.16 ns in acidic DMSO) and deprotonated ( approximately 1.4 ns in basic DMSO) compo
48 es generated in the reaction of benzyne with deprotonated arenes or heterocycles has been developed,
49 ed amino acids, the more acidic ammonium ion deprotonates as the media pH is changed from acidic towa
50 s of D422 to Glu, Cys, and Ser show that the deprotonated aspartate is essential for splicing, most l
52 mo-3-methoxycyclohex-2-en-1-ones are readily deprotonated at C-6, and the resulting anions react smoo
54 ng: 1) the carboxylic-rich sub-fractions are deprotonated at lower pH values and eluted earlier, whil
55 s ca. 9-10 where the thymine base is largely deprotonated at N3, one-electron oxidation of the thymin
57 de (3(-)) and Ru-monohydride (4(-)) that are deprotonated at nitrogen in the pincer ligand backbone.
58 nts show that the major fraction of Asp85 is deprotonated at pH >3 and that it protonates only at low
60 LB-bound SERCA populates an E1 state that is deprotonated at residues E309 and D800 yet protonated at
61 n that the phosphate groups of GTP are fully deprotonated at the start of the hydrolysis reaction, wh
65 xture of protonated (A) absorbing at 397 and deprotonated (B) absorbing at 515 nm chromophores, which
66 of Cu(II) involved His and the nitrogens of deprotonated backbone amide groups, resulting in either
67 one sites and (ii) species with at least one deprotonated base (in addition to several deprotonated p
68 ype of isomer is most likely to occur if the deprotonated base is located at the first or last positi
71 2-c-4)(2)][HIr(kappa(2)-P,C-L(mAd))(L(mAd))] deprotonates both H(2)N(2,6-(i-Pr)(2)C(6)H(3)) and HOC(6
72 te glutamate (Glubeta(117)) is positioned to deprotonate bound acyl-CoA and initiate carbon-carbon bo
75 The results suggest that (1) alphaY190 is deprotonated by alphaK145 to strengthen the interaction
78 c alpha-protons of sulfoxides are reversibly deprotonated by LiOtBu, and a palladium phosphine comple
79 2-siloxycyclopropanecarboxylate was smoothly deprotonated by lithium diisopropylamide and reacted wit
80 -alkynylbenzamide is predicted to be readily deprotonated by many bases, with subsequent cyclization
81 The fully hydrogenated complex, 4, is first deprotonated by OH(-) to form 5, which then releases hyd
82 chain when the physiological substrates are deprotonated by TbbTIM to form an enediolate phosphate t
83 supported by observing the incorporation of deprotonated -C identical withCPh as ligands on rod-shap
84 enzyme-reactant complex contains an anionic deprotonated C4a-peroxyflavin that is stabilized by stro
86 use of ion mobility separation, performed on deprotonated carbohydrate ions following their release f
88 g bidentate inner-sphere coordination of the deprotonated carboxylate group and hydrogen bonding thro
89 -assisted C-H activation mechanism where the deprotonating carboxylate adopts a pseudo-apical geometr
90 ge form where the metal ion interacts with a deprotonated carboxylic acid and the proton is displaced
91 tightly bound, while at pH 7.5 Asp30 becomes deprotonated, causing the conformation to change to an o
92 l properties in the Pr form reminiscent of a deprotonated chromophore as confirmed by resonance Raman
93 n/deprotonation of the chromophore, with the deprotonated cis- and protonated trans-isomers correspon
95 rated C1C2 structure with both E123 and D253 deprotonated closely resembles the available crystal str
98 orted that a bimetallic sodium-zinc base can deprotonate cyclic tetrahydrofuran under mild conditions
102 and amine groups can be either protonated or deprotonated depending on the pH of the background elect
104 naturally occurring bromide, brominates the deprotonated DMS(-) anion with a near-diffusion controll
105 as been used to select individual isomers of deprotonated DNA oligonucleotide multianions for subsequ
107 state, especially when the sulfonamide NH is deprotonated, drastically raises the activation barrier
108 onversion is found to occur more readily for deprotonated dThd and its nucleotides than for N3-Me-dTh
111 e-energy simulations with the protonated and deprotonated E3 residue further showed that the protonat
112 r calculations suggest that an external base deprotonates either G40(N1) or possibly A-1(O2'), which
113 that four-coordinate HIr(N(2))(L(mAd))(2) is deprotonated en route to [Li(12-c-4)(2)][HIr(kappa(2)-P,
116 tagon of metal sites formed around the penta-deprotonated Etglu(5-) ligand; the chirality of N-ethyl-
117 Nucleophiles that are anionic or easily deprotonated exclusively produce cyclopentenones via Naz
118 ning are ruled out by demonstrating that E90 deprotonates exclusively in the nonconductive P(4)(480)
119 ion-induced dissociation (CID) of a range of deprotonated fatty acid standards was studied using line
121 or p-benzoquinones to generate diferric and deprotonated [Fe(2)S(2)((Pr)bbim)(2)](Et(4)N)(2) (1) and
123 e to the speciation change of Q(*-) with its deprotonated form (Q(*-)) oxidizing Fe(II) more rapidly
124 The absorption and emission spectra of the deprotonated form are bathochromically shifted by more t
125 (2+)* does not show direct DNA cleavage, the deprotonated form of 1H(2)O(2+)* does via a proton-coupl
128 hylphenyl)imidazol-2-ylidene; "IXy-H" is the deprotonated form of IXy) exhibit metallosilylene-like (
129 -dimethylphenyl)imidazol-2-ylidene-1-yl (the deprotonated form of IXy); Cp* = eta(5)-C5Me5] and Cp*Ru
130 M1M2Cl(py3tren), where py3tren is the triply deprotonated form of N,N,N-tris(2-(2-pyridylamino)ethyl)
131 1-8 and x = 0-1.5), where L(n) stands for a deprotonated form of the benzyl-substituted derivatives
133 , which corresponds to its reaction with the deprotonated form of the substrate, and kobs2, which cor
134 inhibitor isoeugenol is predominantly in its deprotonated form when bound to wild-type VAO, but predo
135 ndicators that involve only a protonated and deprotonated form, a third species, arising from the the
136 tablished by releasing the ligands, in their deprotonated form, from the protein using collision-indu
137 groups (COO(-) and some amine groups in its deprotonated form, NH2) of cysteine attached on the gold
140 the hydroxylamines deriving from neutral and deprotonated forms of 4-carboxy-TEMPO have been measured
141 other hand, the S(1) lifetimes of the singly deprotonated forms of hypoxanthine and inosine show dras
142 opy discriminates between the protonated and deprotonated forms of the carboxylic acid buffer, and th
143 ic or neutral pH has revealed protonated and deprotonated forms of the iminoquinone that are accompan
146 hydroxyl group, which is hydrogen-bonded to deprotonated G40, concurrent with G40(N1) moving closer
147 ectroscopy, we demonstrate that the isolated deprotonated GFP chromophore can be trapped in the first
148 lar dynamics simulations with protonated and deprotonated GLU(ex) in the presence/absence of external
149 raction between the membrane surface and the deprotonated Glu134 residue of the rhodopsin-conserved E
152 to allow electrospray-generated ions of the deprotonated glucose molecules to be monitored at their
153 inter-channel distance exerts a force on the deprotonated glutamate, resulting in net directional rot
154 mass spectrometer in the negative ion mode, deprotonated glyceollin precursors yield a diagnostic ra
156 valuated for a series of singly and multiply deprotonated glycopeptides from the model glycoprotein k
157 ation and are phototransformed either into a deprotonated green fluorescent form by decarboxylation o
158 FT investigation provide indication that the deprotonated guanidine involved in such a catalysis acts
159 ide of C1(A5P), with the PEP phosphate group deprotonated, has the lowest energy barrier ( approximat
160 tructures of FAAH bound to an inhibitor as a deprotonated hemiketal mimicking the enzymatic tetrahedr
161 ctive site catalytic nucleophile Ser241 as a deprotonated hemiketal, but also to Cys269 through the p
162 alpha-ketoheterocycle inhibitors captured as deprotonated hemiketals mimicking the tetrahedral interm
163 found to have the largest effect followed by deprotonated His, Met, Cys, protonated His, Asn, Arg, an
164 amidate complex (25, for N-acetamido) of the deprotonated hydrazide and a Pt-alkyl complex of the cyc
166 the latter remains ultrafast but the singly deprotonated hypoxanthine shows a much longer lifetime o
167 Theory to be very sensitive to the amount of deprotonated-imine character in the wave function, such
170 is observed that stronger acids (i.e., fully deprotonated in the droplets) yielding anions with highl
171 e residues, Tyr7, was previously shown to be deprotonated in the neutron crystal structure at pH 10.
172 group has been measured to be 6.3 and hence deprotonated in the range of maximal enzyme activity.
178 rs were measured for dissociation of gaseous deprotonated ions (at the -7 charge state) of complexes
179 ured for the loss of neutral ligand from the deprotonated ions of the 1:1 complex of bovine beta-lact
180 lision-induced dissociation performed on the deprotonated ions of the protein-carbohydrate complexes.
183 howed that FAD can exist in the gas phase as deprotonated (M = C27H31N9O15P2) and protonated forms (M
184 olution using a commercial source produces a deprotonated [M-H]- anion with the gas-phase equilibrium
185 alized with mixed monolayers of hydrophilic (deprotonated mercaptoundecanoic acid, MUA) and hydrophob
186 e rearrangements proceed from the reactive N-deprotonated metal hydroxamates and lead to metal carbam
187 s of H2O and CH2O were also observed for all deprotonated model compounds, which involve a previously
188 e two intestinal microbiota metabolites with deprotonated molecular weights of [M-H]-165/121 and 193/
189 nd to effectively identify the protonated or deprotonated molecule ([M + H](+) or [M - H](-)) while b
190 were confirmed by exact mass search of their deprotonated molecule [M-H](-) and its MS(4) fragmentati
192 solvent system, without any other additives, deprotonated molecules of brevetoxins do not appear in h
193 or vinyl derivatives, indicating that these (deprotonated) nanoparticles were stabilized instead by t
194 proximately 2.5 x 10(2) M(-1) s(-1)) and the deprotonated, negatively charged form (k(ox,P(-)), 3.4 x
195 by increasing its acidity and by biasing the deprotonated nucleophile into conformations conducive to
196 nm causes efficient charge reduction of the deprotonated oligodeoxynucleotides via electron detachme
197 t gaseous carboxylic acids RCOOH(g) begin to deprotonate on the surface of water significantly more a
198 land, show the presence of aminium ions with deprotonated organic acids; 23% of the detected positive
204 , ammonium, ammonia, and both protonated and deprotonated peroxynitrite (selectivity coefficients of
206 th excess electrons localized exclusively at deprotonated phosphate backbone sites and (ii) species w
208 ation, C(16)H(10)(+*), which is reacted with deprotonated phosphorylated peptides in a 3-D ion trap m
210 ons in small covalent model compounds (i.e., deprotonated polyhydroxy alcohols) were measured by nega
212 imary amine groups in multiply protonated or deprotonated polypeptides in the gas phase via ion/ion r
213 s is partially due to a back-reaction of the deprotonated Pr chromophore at pH 9 after photoexcitatio
214 partners properly, K661 is predicted to get deprotonated prior to substrate binding and to act as an
215 effects of nitroxyl (HNO) from its oxidized/deprotonated product nitric oxide (.NO), but the lack of
216 tive at increasing the extent of charging of deprotonated protein ions in negative ionization mode ES
219 dized to manganese(III) and two of the three deprotonated radicals (NITIm(-)) are reduced to their di
223 wo states per cycle, the late M- (M2) with a deprotonated retinal Schiff base and the consecutive gre
224 II)PhCOOH plus (n)Bu(4)NOH in DMF yields the deprotonated Ru(II) complex, (n)Bu(4)N[Ru(II)(pydic)(tpy
226 Acting as a chain-propagating species, the deprotonated semiquinone radical (SQ(*) (-)) generated f
227 sfer from C-6 of the bound nucleotide to the deprotonated side chain of Lys-93 to give the enzyme-bou
232 aggregation concentrations of protonated and deprotonated sphingosine are 1.71 +/- 0.24 microM and 0.
234 essential effects on host cells when in the deprotonated state and when presented in the context of
235 ylalanine at the surface transition to their deprotonated state at bulk pH values lower than the mole
237 membrane fragments in protonated and partly deprotonated state has been mapped by means of atomic fo
238 om the crystal structure of a photoactivated deprotonated state of rhodopsin to the low pH crystal st
242 atio of signal intensities of protonated and deprotonated states being a reliable pH marker (accuracy
243 l polyene chain, for both the protonated and deprotonated states that represent the dark and photoact
248 a brucei brucei (TbbTIM) acts as the base to deprotonate substrate to form an enediolate phosphate tr
249 iated by triplet dioxygen and its binding to deprotonated substrate and only thereafter a spin state
250 o modulate the alphaC-H bond strength of the deprotonated substrate to facilitate the oxidation.
252 N atoms are open to oxidative attack in the deprotonated substrate while an internal hydrogen bond h
254 he intermediacy of sulfenate anions, and the deprotonated sulfoxide was determined to be the resting
255 plexes [((t)Bu-PNP*)Ir(H)2] (2) ((t)Bu-PNP*, deprotonated (t)Bu-PNP ligand) and [((t)Bu-PNP)Ir(H)] (3
256 omplexes [((t)BuPNP*)Ir(R)(OH)] ((t)BuPNP* = deprotonated (t)BuPNP ligand), in a process which utiliz
258 h this residue playing the role of a base to deprotonate the amide moiety of Cys20 upon iron binding
259 and hence E3 ligases require a mechanism to deprotonate the amino group at physiological pH to produ
261 rrangement is primed for catalysis as it can deprotonate the incoming substrate lysine residue and st
262 re, the base should be anionic to be able to deprotonate the neutral palladium-amine complex and/or e
265 on of arenynes, the esters in the tether can deprotonate the Wheland intermediate, thus avoiding more
266 diate catalysis: a guanosine that we propose deprotonates the 2'-hydroxyl of the nucleotide 5' to the
267 dered insulating by solvent immersion, which deprotonates the hydroxylated LAO surface; interface con
268 the transient Al horizontal lineNTol species deprotonates the methyl group of the NacNac ligand.
269 hich lysine-180 acts as a catalytic base and deprotonates the reactive hydroxyl group of caffeoyl-CoA
270 and cleavage mechanism in which a histidine deprotonates the ribosyl 2'-hydroxyl pinned in place by
272 neral base for activating the nucleophile by deprotonating the 2'-hydroxyl to initiate the reaction (
273 lycal formation was efficiently prevented by deprotonating the hydroxyl group in position 2 of the gl
274 tes nucleophilic attack of the propeptide by deprotonating the Thr1 hydroxyl group and that both resi
276 e carboxy-bipyridyl ligands are successively deprotonated, the energy of the (3)MLCT state rises abov
277 e open conformation, whereas when His-235 is deprotonated, the hydrogen bond dissociates, and the cha
278 Results showed that with the D2.50 residue deprotonated, the M3 receptor is bound by an allosteric
279 intensity upon either fully protonating, or deprotonating, the fibrils at pH = 0 or 14, respectively
280 In agreement, calculations predict that the deprotonated thymine base has a lower energy barrier (ca
281 azole side chain of the histidine residue is deprotonated to afford Zn-imidazolate chains, with bondi
289 relatively low pKa value, N-Cl-DCAM tends to deprotonate under typical drinking water pH conditions,
291 N-methylritonavir is expected to be readily deprotonated under physiologic conditions to yield a thi
292 with beta-O-4 linkages, were evaporated and deprotonated using negative-ion mode ESI in a linear qua
293 m cations enable carbonate ions (CO3(2-)) to deprotonate very weakly acidic C-H bonds (pKa > 40), gen
294 complexes Mn4 O4 (H2 O)n (+) (n=1-7) contain deprotonated water with a maximum of four dissociatively
295 systems, because tyrosine Z is oxidized and deprotonated, whereas plastoquinone B is reduced and pro
296 therefore probably is the residue that must deprotonate with a pK of 6.5 for binding of vesamicol an
297 iched secondary allylic carbamates have been deprotonated with sBuLi and reacted with boronic esters.
298 ppaO')][B(C6 F5)4], 4[B(C6 F5)4], was simply deprotonated with the strong base K(N(SiMe3 )2 ) to give
299 show that, at the air-water interface, HMSA deprotonates within a few picoseconds and results in the
300 he otherwise fully protonated chromophore to deprotonate without additional major structural changes.
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