ライフサイエンスコーパス: dodecamer

1 antly a monomer and the activated state is a dodecamer.

2 binding does not require its assembly into a dodecamer.

3 osine on the structure of the Dickerson-Drew dodecamer.

4 out 20% of the trimer is incompetent to form dodecamer.

5 lU(DeltaI) hexamer binds one end of the HslV dodecamer.

6 base pairing remained intact throughout the dodecamer.

7 paired C and G bases in the CCATGCGCTGAC DNA dodecamer.

8 erminus of each subunit in the centre of the dodecamer.

9 sociated off center with a single layer of a dodecamer.

10 ystallographic 2-fold symmetry form the SpeG dodecamer.

11 al arrangement about a central cavity form a dodecamer.

12 uciform tetramers assemble into a triangular dodecamer.

13 crystal structure of a substrate-bound DegP dodecamer.

14 binding site on the interior surface of the dodecamer.

15 y synthesizing a homologous series up to the dodecamer.

16 Abeta42 alone produces oligomers as large as dodecamers.

17 group in rF:G pairs of the investigated RNA dodecamers.

18 are thought to do so only as fully assembled dodecamers.

19 do-tridecamer, and spermidine for the pseudo-dodecamers.

20 er oligopeptides to simulate the spectra for dodecamers.

21 for the assembly and secretion of functional dodecamers.

22 isulfide-cross-linked, trimeric subunits and dodecamers.

23 culture as trimeric subunits rather than as dodecamers.

24 l oligomers, including dimers, hexamers, and dodecamers.

25 nstead of an excess of HOCl, as observed for dodecamers.

26 re both 750-kilodalton (kDa) alpha(6)beta(6) dodecamers.

27 y could be the most stable species for Abeta dodecamers.

28 to three distinct oligomers: nonamer (9mer), dodecamer (12mer), and the previously characterized octa

29 ynamics trajectories of two solvated A-tract dodecamers: 1D89, d(CGCGA(6)CG), and 1D98, d(CGCA(6)GCG)

30 ics of opening of AT/TA basepairs in the DNA dodecamer 5'-d(GCTATAAAAGGG)-3'/5'-d(CCCTTTTATAGC)-3'.

31 The crystal structure of the RNA dodecamer 5'-GGCC(GAAA)GGCC-3' has been determined from

32 Z3dU) and 7-deaza-dG into the Dickerson-Drew dodecamers 5'-d(C (1)G (2)C (3)G (4)A (5)A (6)T (7)T (8)

33 structure and dynamics of the Dickerson DNA dodecamer [5'd(CGCGAATTCGCG)2] in solution have been inv

34 els of insoluble amyloid-beta (Abeta), Abeta dodecamers (Abeta*56), prefibrillar soluble oligomers, a

35 f the active clones were tested as synthetic dodecamers, Ac-AGX(8)GA-NH(2).

36 minal arms are located on the outside of the dodecamer, accessible for interaction with client protei

37 structure into a 19-A cryo-EM map of a VacA dodecamer allows us to propose a model for how VacA mono

38 Dodecamers also show utility in the analysis of gammadel

39 Inspection of the 5' and 3' ends of the dodecamers also supplies new information on the fraying

40 ntal observation, for (i) the Dickerson-Drew dodecamer and (ii) three oligomers containing A-tracts.

41 trates that the dimeric interface within the dodecamer and a Lys-Trp-Lys triad at the center of the r

42 In this study, we used two forms of SP-D, a dodecamer and a shorter fragment containing the trimeric

43 used to build both the catalytically active dodecamer and catalytically inactive dimer.

44 entify the enzyme(s) that cross-links the 7S dodecamer and characterize its expression in the kidney

45 y 0.6 kcal/mole nucleotide for the Dickerson dodecamer and declines for longer oligonucleotides.

46 181A, which, as expected, disrupts the Hsp21 dodecamer and decreases chaperone activity.

47 ing the tetramer, conjugates of the octamer, dodecamer and hexadecamer elicited IgG LPS antibodies af

48 ose-deoxyribose mutations in a single-strand dodecamer and in trinucleotide models suggest that in th

49 multiple subunit contacts between the CaMKII dodecamer and the F-actin cytoskeleton that stabilize th

50 with natural SP-D (10 micro g/ml) containing dodecamers and higher-order forms exhibited aggregation

51 e the different lengths of DNA in the pseudo-dodecamers and pseudo-tridecamer, all three structures f

52 metry to investigate glutamate dehydrogenase dodecamers and serum amyloid P decamers as a function of

53 mers, trimers, and homomultimers as large as dodecamers and that CsmA directly interacts with the Fen

54 n that this family of proteins assemble into dodecamers and their quaternary structure is entirely cr

55 a DNA segment with 12 base pairs (Dickerson dodecamer) and a (8,8) SWNT in water, with counterions t

56 ling model that active Vps4 is a double-ring dodecamer, and argue that, like other type I AAA ATPases

57 emble in a tetrahedral arrangement to form a dodecamer, and five dodecamers pack together to form an

58 metal site is necessary for formation of the dodecamer, and metal binding at this site facilitates ol

59 Portal, a dodecamer, and motor, a pentamer, form two concentric ri

60 atomic models for the T4 portal monomer and dodecamer, and we fit the dodecamer into the cryo-electr

61 rs assemble hierarchically to form hexamers, dodecamers, and annular porelike structures.

62 he CD spectra of analogous peptoid hexamers, dodecamers, and pentadecamers, composed entirely of eith

63 erminal disulfides are required to stabilize dodecamers, and support our hypothesis that the oligomer

64 d that the two HslV(6) rings in the protease dodecamer are activated independently rather than cooper

65 he activation-competent species, whereas the dodecamers are a storage form.

66 Dodecamers are able to detect early stage CD4(+)CD8(+)do

67 In particular, dodecamers are able to detect two- to fivefold more anti

68 Architecturally conserved viral portal dodecamers are central to capsid assembly and DNA packag

69 Compared with hexamers, Lon dodecamers are much less active in degrading large subst

70 Soon after (>/=10 min), dodecamers are observed to seed the formation of extende

71 The CII dodecamers are, however, dynamic and rapidly exchange su

72 hemoglobin chains that are assembled into 12 dodecamers arranged at the periphery of the complex arou

73 Here we report a peptide-MHC (pMHC) dodecamer as a "next generation" technology that is a si

74 MR to follow the secondary structure of this dodecamer as the solution composition was changed stepwi

75 ilizing the prepore into a poorly structured dodecamer as visualized by electron microscopy.

76 nt species, pea, wheat, and Arabidopsis, are dodecamers as determined by nano-electrospray mass spect

77 forms a scaffold on which twelve hemoglobin dodecamers assemble.

78 .X hydrogen bonds must be weakened to effect dodecamer assembly and that the molecular mechanism invo

79 s of portal cysteines in subunit folding and dodecamer assembly.

80 R indicate that this photoinduced hexamer-to-dodecamer association occurs through intermolecular beta

81 Combined with photoinitiated hexamer-to-dodecamer associations in the presence of the photorespo

82 ially isostructural with the native unlinked dodecamer at 1.9 A.

83 th the sodium and the potassium forms of the dodecamer at high resolution indicate that the original

84 A-form RNA segment and a helical B-form DNA dodecamer at natural (13)C abundance.

85 Escherichia coli Lon also interact to form a dodecamer at physiological protein concentrations.

86 versatile enzyme is known to form functional dodecamers at its optimal pH and is thought to work in c

87 shown that AT can homooligomerize to form a dodecamer, AT(12), composed of a tetramer of trimers, AT

88 UV melting studies of a dodecamer bearing one, two, or three nonadjacent modifie

89 ntact with the membrane is buried within the dodecamer before protonation.

90 , does not significantly form the hexamer or dodecamer but instead produces a mixture of smaller olig

91 ation of lysyl-derived cross-links in the 7S dodecamer but not in the NC1 domain.

92 K not only inhibits the formation of Abeta42 dodecamers, but also removes preformed Abeta42 dodecamer

93 6M34A and Cx26V84L are stable as hexamers or dodecamers, but Cx26T135A and Cx26P87L oligomers are not

94 In addition, human dodecamers, but not full-length human trimers, efficient

95 ifferent molecular forms of SP-D showed that dodecamers-but not trimeric subunits-mediate optimal agg

96 duct, G[8,5-Me]T, embedded in a solvated DNA dodecamer by means of quantum mechanics/molecular mechan

97 e we report fibril propagation of an Abeta42 dodecamer called large fatty acid-derived oligomers (LFA

98 ted complexes demonstrated that each HSP18.1 dodecamer can bind the equivalent of 12 MDH monomers, in

99 Although SP-D dodecamers can selectively augment metalloproteinase act

100 The DNA dodecamer CATGGGCCCATG in a crystal structure of resolut

101 form propeptide hexamers by binding to other dodecamers, causing aggregation.

102 ost active compounds bound to an AT-rich DNA dodecamer (CGCGAATTCGCG)2 and using DSC were found to in

103 tion structure of the self-complementary DNA dodecamer (CGT_GACGT_TACG above GCAT_TGCAG_TGC] which co

104 her-order assembly that we have modeled as a dodecamer composed of two stacked hexameric rings.

105 otein D (SP-D) is preferentially secreted as dodecamers consisting of four collagenous trimers cross-

106 SP-D is assembled predominantly as dodecamers consisting of four homotrimeric subunits each

107 he octamers are tetramers of dimers; and the dodecamers contain two trimer subunits surrounded by thr

108 The solution structures of a duplex DNA dodecamer containing a cis-syn cyclobutane thymine dimer

109 herefore, the structure of a double-stranded dodecamer containing a tetrahydrofuran apurinic lesion a

110 on of the NMR measurements collected on four dodecamers containing a substantial set of dinucleotide

111 The dodecamer contains the TATA box of the adenovirus major

112 t for antiviral and anticancer drugs, pseudo-dodecamer crystals were soaked with one such antiviral a

113 d the three-dimensional structure of the DNA dodecamer d(CGC[iG]AATTTGCG) (denoted iG-DODE) by X-ray

114 For example, the conversion of dodecamer d(CGCAAATTCGCG) from hairpin to random coil is

115 rystal structure refinement of the synthetic dodecamer d(CGCGAASSCGCG), where S = 4'-thio-2'-deoxythy

116 son of its structure with that of the native dodecamer d(CGCGAATTCGCG) has revealed that the major di

117 However, the MD structure of the dodecamer d(CGCGAATTCGCG) is not highly sensitive to whe

118 f the complex between furamidine and the DNA dodecamer d(CGCGAATTCGCG)2 and compared it with the same

119 n Fe(II).bleomycin A2 and the Dickerson-Drew dodecamer d(CGCGAATTCGCG)2 is presented.

120 The approach is demonstrated for the DNA dodecamer d(CGCGAATTCGCG)2, where direct interactions ar

121 The structure of the dodecamer d(CGCGAATXCGCG)(2), in which X = Z3dU, 5-(3-am

122 onucleotides based on the self-complementary dodecamer d(CGCTAATTAGCG) were synthesized.

123 The solution structure of a DNA dodecamer d(GGCAAAAAACGG)/d(CCGTTTTTTGCC) containing an

124 ons were carried out for the double-stranded dodecamer d(GGTATATAAAAC), in which a transition from A-

125 The dodecamer d[CGCA(Ap)ATTTGCG]2 was investigated, and we a

126 simulations were performed on the duplex DNA dodecamers d(CGCGAA TT CGCG): d(CGCGAATTCGCG) and d(GCAC

127 e and dynamics of the self-complementary DNA dodecamer [d(CGCAGATCTGCG)]2.

128 The DNA molecule studied is the dodecamer [d(CGCGAGCTCGCG)]2.

129 ution solution structure of the cross-linked dodecamer [d(GCATCCGGATGC)]2 (the cross-linked guanines

130 The structure of the DNA duplex dodecamer, d(CCTCTGGTCTCC.

131 tential to the structure refinement of a DNA dodecamer, d(CGCGAATTCGCG)(2), for which NOE and dipolar

132 e 1.7 A X-ray crystal structure of the B-DNA dodecamer, [d(CGCGAATTCGCG)] (DDD)-bound non-covalently

133 The structure of the modified Dickerson-Drew dodecamer (DDD) in which guanine at position G(4) has be

134 th sequence CGCGAATTCGCG, the Dickerson-Drew dodecamer (DDD), established a unique geometry of the ce

135 ong-timescale dynamics of the Drew-Dickerson dodecamer (DDD: d(CGCGAATTGCGC)2) a prototypical B-DNA d

136 uble-stranded B-DNA dodecamer (the Dickerson Dodecamer, DDD, [d(CGCGAATTCGCG)]2) associated with a cy

137 uits a hexamer-forming peptide to form mixed dodecamers demonstrates that one species can dictate the

138 ds to predict the structure of two new B-DNA dodecamers, determined herein by means of 1H nuclear mag

139 with North-locked sugars (RNA-like) into the dodecamer did not greatly affect duplex formation or mel

140 We found that HypT dodecamers dissociated into tetramers in the presence of

141 The OrnDC L30a dodecamer dissociates into dimers at high pH in the pres

142 simulations were performed on models of the dodecamer DNA double-stranded segment, [d(CGCGAATTCGCG)]

143 stal structure of the non-self-complementary dodecamer DNA duplex formed by d(CG[5BrC]ATAT-TTGCG) and

144 irs were attached to selected positions of a dodecamer DNA duplex with a known NMR structure, and eig

145 tion exhibits similar time scales to that of dodecamer DNA.

146 cal B-DNA conformation of the Dickerson-Drew dodecamer duplex [[d(CGCGAATTCGCG)]2, (ODN 1)].

147 n structure of the nitrous acid cross-linked dodecamer duplex [d(GCATCCGGATGC)]2 (the cross-linked gu

148 t the two independent iG.T base pairs in the dodecamer duplex adopt different (one in Watson-Crick an

149 ange 8.0-2.4 A for a model consisting of the dodecamer duplex and 66 water molecules.

150 he 5'-CpG-3' sequence was monitored within a dodecamer duplex by NMR spectroscopy, in situ, using a s

151 The crystal structure of the DNA dodecamer duplex CATGGGCCCATG lies on a structural conti

152 ined four crystal structures of a B-form DNA dodecamer duplex containing ClU:A or ClU:G base pairs.

153 the 8-OG:G pair on a self complementary DNA dodecamer duplex d(CGCGAATT(8-O)GGCG)(2).

154 A molecular dynamics simulation of the dodecamer duplex d(CGCGAATTCGCG) using the particle mesh

155 The solution structure of the dodecamer duplex d(CTTTTGCAAAAG)(2)and its 2:1 complex w

156 hotoproducts formed in a TATA box-containing dodecamer duplex sequence in the presence or absence of

157 tosecond resolution, at the surface of a DNA dodecamer duplex whose native structure remains unpertur

158 e at atomic resolution determined for an RNA dodecamer duplex with rF opposite G manifests only minor

159 solution structure of a second cross-linked dodecamer duplex, [d(CGCTACGTAGCG)]2, which shows that t

160 onformations of these ANA analogues in a DNA dodecamer duplex, we have modeled a duplex of an all-C3'

161 atom of a single guanosine residue in a DNA dodecamer duplex.

162 g cationic side chains in the Dickerson-Drew dodecamer duplex.

163 five examples of A-tract DNA oligonucleotide dodecamer duplexes for which crystal structures are avai

164 their behavior in the context of hexamer and dodecamer duplexes were carried out, with comparison to

165 CD spectroscopic studies of two related DNA dodecamer duplexes, d(CGCAAATTTGCG)(2) (A(3)T(3)) and d(

166 nm) clearly detects two transitions for this dodecamer, each giving a pronounced change in ellipitici

167 ain of E. coli 5S ribosomal RNA and a duplex dodecamer encompassing an internal loop E have been dete

168 ence of a functional regulation of the dimer-dodecamer equilibrium in vivo.

169 analysis of the pH dependence of the trimer-dodecamer equilibrium revealed a near physiological pK(a

170 ition (called structure X here) to the B-DNA dodecamer family of X-ray structures.

171 tationally investigate four classes of Abeta dodecamers: fibril, fibril oligomer, prefibril/preglobul

172 hways and provide a candidate in the Abeta42 dodecamer for the primary toxic species in Alzheimer's d

173 ls that tightly spooled DNA about the portal dodecamer forces a conformation that is significantly di

174 tution d-Pro36-l-Pro37 abolished hexamer and dodecamer formation by Abeta42 and produced an oligomer

175 al pH, VacA is predominantly a water-soluble dodecamer formed by two apposing hexamers.

176 A cocrystallization experiment in which a dodecamer-forming peptide recruits a hexamer-forming pep

177 The 480 kDa dodecamer forms a three-tiered assembly, in which DnaC a

178 The hexamer and dodecamer forms coexist in solution.

179 The thermodynamic stability of nine dodecamers (four DNA and five RNA) of the same base comp

180 rotection (hydroxyl radical) for Dps protein dodecamers from Bacillus anthracis (Ba) since crystal st

181 decamers, but also removes preformed Abeta42 dodecamers from the solution.

182 can catalyze full-length DNA synthesis on a dodecamer GNA template.

183 The hemoglobin dodecamer has a molecular 3-fold axis of symmetry that r

184 Hydration at different sites in the dodecamer has been measured using ROESY and NOESY experi

185 A guanine-rich PNA dodecamer having the sequence H-G4T4G4-Lys-NH2 (G-PNA) h

186 onformational features of the Dickerson-Drew dodecamer in both the solid state and the aqueous liquid

187 w of the conformational space sampled by the dodecamer in solution and permit one to analyze fluctuat

188 solution structure of an oxaliplatin-GG DNA dodecamer in the AGGC sequence context by 2D NMR studies

189 The precursor form of API assembles into a dodecamer in the cytosol and maintains this oligomeric f

190 eaved recombinant rat and natural human SP-D dodecamers in a time- and dose-dependent manner, which w

191 We show that SpeG forms dodecamers in solution and in crystals and describe its

192 on distribution around (5'-CGCGCGCGCGCG-3')2 dodecamers in solution in B-DNA, A-RNA, Z-DNA and Z-RNA

193 tructures for cisplatin-GG and undamaged DNA dodecamers in the AGGC sequence context and have compare

194 re, six DHO and six ATC chains form a hollow dodecamer, in which the 12 active sites face an internal

195 stabilize the bend direction in the A-tract dodecamers include propeller twisting of AT base-pairs,

196 , and activation, we aimed to dissociate the dodecamers independently of DNA and to analyze HOCl-depe

197 cromolecules attached to both ends of an mPE dodecamer induce the foldamer to collapse into a presume

198 portal monomer and dodecamer, and we fit the dodecamer into the cryo-electron microscopy density of t

199 g of HypT to DNA induces dissociation of the dodecamers into dimers and tetramers, thus forming the D

200 ble of recent NMR data collected on four DNA dodecamers involved in nucleosome positioning.

201 This SpeG dodecamer is asymmetric except for the one 2-fold axis a

202 The 7S dodecamer is recognized as an important structural cross

203 Although the 7S dodecamer is stabilized by covalent cross-linking, the m

204 The dodecamer is straightforward and inexpensive to produce

205 sequence, and crystal form as the "Dickerson dodecamer", is refined against a complete, low-temperatu

206 simulations, when compared with those of the dodecamer itself, show that incorporation of the analog

207 Thus, the Vps4 dimer and dodecamer likely form distinct but overlapping interface

208 biochemical studies suggest that mtMCM is a dodecamer, likely a double hexamer (dHex).

209 activation of HSP16.9 occurs by shifting the dodecamer <--> dimer equilibrium in favor of free dimers

210 d an A-to-G transition in a highly conserved dodecamer motif between DLK1 and GTL2.

211 determined for double helix formation by DNA dodecamers near 25 degrees C are in the range of 0.72-0.

212 Results for RNA and DNA dodecamers obtained at higher temperatures, and literatu

213 surface, suggesting that the assembly of the dodecamer occurs through head-to-tail interactions of th

214 iana, the overall architecture of which is a dodecamer of (beta/alpha)8 barrels, similar to the major

215 Lumbricus terrestris hemoglobin is a 213 kDa dodecamer of four chemically distinct globin chains, con

216 10.5, 6.3, 5.0, and 4.2 nm, identified as a dodecamer of globin chains ([a+b+c]3d3, 213 kDa), the di

217 t be due to the oligomeric nature of EmrE, a dodecamer of helices was constructed based on the result

218 G4T4G4-Lys-NH2 (G-PNA) hybridizes with a DNA dodecamer of homologous sequence to form a four-stranded

219 x contains the portal protein, a gear-shaped dodecamer of radially disposed subunits with a central c

220 The structure of a crosslinked B -DNA dodecamer of sequence C-G-C-G-A-A-T-T-C-G-C-G has been s

221 2-A crystal structure, PdxS is a cylindrical dodecamer of subunits having the classic (beta/alpha)8 b

222 e terminase complexed with the portal vertex dodecamer of the prohead.

223 The portal is composed of a dodecamer of UL6 molecules which form a ring-like struct

224 virus type 1 (HSV-1) portal is composed of a dodecamer of UL6 protein molecules whose incorporation i

225 The crystal structure of a dodecamer of Z from Lassa virus, presented here, illustr

226 ligomers ranging in size from dimers through dodecamers of 4 kDa monomeric Abeta have been resolved i

227 Higher resolution mapping using a set of dodecamers of overlapping sequences from the C-terminal

228 o three modifications were incorporated into dodecamers of RNA [AAGA GGG AUGAC] resulting in thermal

229 Dodecamers of RNA [CUACGGAAUCAU] were functionalized wit

230 DNA dodecamers of the alternating d(CG).d(CG) sequence with

231 denaturation, and spectroscopic studies with dodecamers of the form d(ATTA-XGCX-TAAT) and their self-

232 rmation of a set of 30 octamer, decamer, and dodecamer oligomers for which high-resolution crystal st

233 roscopy using a series of self-complementary dodecamer oligonucleotides that contain the sequence mot

234 The other contains dodecamer oligosaccharides at these same sites.

235 tions on lectin activity, incubation of SP-D dodecamers or murine lavage with peroxynitrite decreased

236 0-50 nm diameter, consisting of eight hetero-dodecamers) or three small rings (10-20 nm diameter, eac

237 al arrangement to form a dodecamer, and five dodecamers pack together to form an annular pore.

238 ndividuals responded to the atypically large dodecamer peptide (169)EECDSELEIKRY(180), which encompas

239 CD1c presented an N-acyl glycine dodecamer peptide (lipo-12) to human T cells, and the re

240 n and yellow fluorescent proteins fused by a dodecamer peptide encompassing a natural cleavage site.

241 The dodecamer peptide SLCHDSVIGWEC, named E12, was selected

242 ound more stably to HLA-B*18:01 than did the dodecamer peptide, whereas, conversely, HLA-B*44:03 boun

243 e binding pocket that accommodates an active dodecamer peptide.

244 otif demonstrated that nonamer, decamer, and dodecamer peptides containing the sequence KCDICTDEY (re

245 The low-affinity, tetramer-negative, dodecamer-positive T cells showed comparable effector cy

246 The dodecamer possesses the normal vector plot and inclinati

247 We discovered that Abeta42 hexamers and dodecamers quickly become the dominant oligomers after p

248 The solution structure of the RNA dodecamer r(CGCAAAUUUGCG)2has been determined using NMR

249 y element in Vbeta6.7 should be considered a dodecamer rather than a decamer and that it confers stro

250 rmamidopyrimidine lesions reduce the T(M) of dodecamers relative to their unmodified nucleotide count

251 s identified to date contain expansions of a dodecamer repeat located upstream of the transcription s

252 genotyping assay capable of detecting single dodecamer repeat unit differences on an automated DNA se

253 We furthermore suggest that expansion of a dodecamer repeat, which we predict to have very high fle

254 ompleted within 1 min, whereas activation of dodecamers required 1 h for completion.

255 are either exposed or sandwiched inside the dodecamer, respectively.

256 tudies show that the minor groove in an AATT dodecamer responds to local sodium ion positions and is

257 spectroscopy of the modified Dickerson-Drew dodecamer revealed that the conformation of the duplexes

258 and of a single dU(8) in the Dickerson-Drew dodecamer revealed that the modifications are essentiall

259 Electron microscopy of this dodecamer reveals a prolate structure with the protease

260 forms tetradecamers in solution, unlike the dodecamers seen in HslV.

261 xpectedly we found that recombinant rat SP-D dodecamers selectively induce the biosynthesis of collag

262 e synthetic ODNs based on the Dickerson Drew dodecamer sequence (CGCGAAT*T*CGCG) were examined where

263 The dodecamer sequence corresponds to the section of a site-

264 arcin and ricin, requires a nearly universal dodecamer sequence that folds into a G-bulged cross-stra

265 terminal His-tag on PrxIII markedly enhances dodecamer stability, particularly apparent in its oxidis

266 In the presence of divalent metal ions, the dodecamers "stack" along their six-fold axis of symmetry

267 eplacement with the corresponding unmodified dodecamer structure.

268 Dodecamer structures are derived from crystals of [d(CGC

269 The dodecamer sugar is a consensus sequence incorporating th

270 limits would include the outermost repeated dodecamers suggested as arm recognition sites by S. J. S

271 similar to the outer surface of the soluble dodecamer, suggesting that the VacA surface in contact w

272 nits are required to form an alpha(6)beta(6) dodecamer that specifically catalyzes the decarboxylatio

273 Z3dU was >5 A, which indicated that in this dodecamer the Z3dU amino group did not participate in a

274 A X-ray structure of a double-stranded B-DNA dodecamer (the Dickerson Dodecamer, DDD, [d(CGCGAATTCGCG

275 rther associate into hexamers, octamers, and dodecamers: the hexamers are trimers of dimers; the octa

276 indings indicate that API is maintained as a dodecamer throughout its import and will be useful to st

277 ant levels (approximately 15%), implying the dodecamer to be an intermediate.

278 that denatured substrates coated the HSP18.1 dodecamers to form expanded complexes.

279 e TnrA dimer and causing an unprecedented GS dodecamer-to-tetradecamer conversion, which concomitantl

280 dynamics study of 21 Casiopeinas with a DNA dodecamer using 10 mus of simulation time for each compo

281 en [Pt(ammine)(cyclohexylamine)]2+ and a DNA dodecamer, using the same sequence as previously reporte

282 Titration calorimetry on the Dickerson dodecamer was also done, with results that were in agree

283 The adenine in each A.T basepair of the dodecamer was labeled with 15N at the N6 position, and t

284 stribution of conserved surfaces in the PdxS dodecamer was used to predict a docking site for the glu

285 ion crystal structures of the Dickerson-Drew dodecamer was used to re-evaluate the deoxyribose pseudo

286 cent crystal and NMR structures of the EcoRI dodecamer, where an overall bend of seven degrees is dis

287 ort here an NMR study of hydration of an RNA dodecamer which has a wide, shallow minor groove.

288 A X-ray structure of the DDD (Dickerson-Drew dodecamer), which has been covalently modified by the te

289 ecules within the hydration shell of a B-DNA dodecamer, which are of interest for many of its biochem

290 er with 20 chains (11.1 ELISA units) and the dodecamer with 10 chains (9.52 ELISA units).

291 a reversible equilibrium between trimer and dodecamer with an equilibrium constant of approximately

292 r in solution, upon binding DNA, BAF forms a dodecamer with DNA bound at multiple discrete sites in t

293 ther known proteasome activator, PafE formed dodecamers with 12-fold symmetry, which required a glyci

294 rivatives yielded oligoadenylates as long as dodecamers with a regioselectivity for 3',5'-phosphodies

295 r dynamics simulations of double-helical DNA dodecamers with and without a single abasic (tetrahydrof

296 s to laterally aggregate and intertwine into dodecamers with elongated, twisted conformations contain

297 LKK) did not interfere with the secretion of dodecamers with lectin activity.

298 21-25 A revealed that all four isoforms were dodecamers with similar but highly unusual architecture.

299 The holoenzyme of PCC is an alpha(6)beta(6) dodecamer, with a molecular mass of 750 kDa.

300 The macrocycles range from a trimer to a dodecamer, with ring sizes from 24 to 114 atoms, and are