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1 ining the immunogenicity of each IgE binding epitope.
2 uence constitutes a PC-specific neutralizing epitope.
3 tor target, but by recognition of a distinct epitope.
4 s and neutralization than the native peptide epitope.
5 sociated with the general variability of the epitope.
6 like receptors, and allotypes having neither epitope.
7 ELISAs, probably via exposure of additional epitopes.
8 from children and adults reacted to unknown epitopes.
9 arly identical profile of cross-neutralizing epitopes.
10 ssed ligands, cancer neoantigens, and T cell epitopes.
11 of different PGs and their assorted sulfated epitopes.
12 enicity breakthrough to conserved protective epitopes.
13 ssible state and which expose V1V2 and/or V3 epitopes.
14 e CRD to glycans that contain Manalpha1-2Man epitopes.
15 lycan, indicating an overlap between the two epitopes.
16 primarily due to the inaccessibility of the epitopes.
17 CD8(+) T cell response to two immunodominant epitopes.
18 izing epitopes and few to no nonneutralizing epitopes.
19 liminated the induction of tier-1 NAbs to V3-epitopes.
20 ontains important CD8(+), CD4(+), and B cell epitopes.
21 n to automatically extract reactive chemical epitopes.
22 B cells that recognize broadly neutralizing epitopes.
23 d further to incorporate specific biological epitopes.
24 capture of the physiological immunodominant epitopes.
25 ics to focus vaccine responses on protective epitopes.
26 as an intact protein bearing multiple linear epitopes.
31 ceptors of NK cells, allotypes having the C1 epitope also recognized by killer cell Ig-like receptors
34 on-associated spikes present nearly all bnAb epitopes and are therefore promising vaccine antigens.
38 xplain amino acid preferences in immunogenic epitopes and highlight opportunities for structural cons
39 e human genome, the links between the T-cell epitopes and low immunogenicity of H7 HA remains unknown
42 matically reduces exposure of CD4i HIV-1 Env epitopes and therefore reduce the susceptibility of HIV-
43 perimental data (analysis of guard cell wall epitopes and treatment of tissue with cell wall digestin
44 ased on a random forest algorithm trained on epitopes annotated from antibody-antigen protein structu
45 rum IgE antibodies directed to the alpha-gal epitope are associated with hypersensitivity to equine a
46 er of clones for the CTL response against an epitope are inversely associated with the general variab
47 SEPIa was applied to a test protein whose epitopes are known, human beta2 adrenergic G-protein-cou
48 lexes shows that the conserved neuraminidase epitopes are located on the head of the molecule and tha
49 ponses, such as those against oxidized lipid epitopes, are thought to mainly derive from T cell-indep
50 support the feasibility of exploring the V3 epitope as a HIV-1 vaccine target in nonhuman primates.
51 rrelated with Abs that reacted with a linear epitope at a lysine residue at position 169 (K169) in th
52 of the most potent bnAbs target a quaternary epitope at the apex of the surface HIV envelope (Env) tr
54 e vaccine candidate, but variation in B-cell epitopes at the dimer interface of DBP leads to inductio
57 monstrate that ectopic expression of insulin epitope B:9-23 (InsB9-23) by thymic APCs is insufficient
59 restored the immunoreactivity of mAbs whose epitope being within residues 44-65 against reconstitute
63 basophil activation tests, determination of epitope binding, DNA methylation signatures, and bioinfo
66 emonstrated that modification of a single H7 epitope by changing 3 amino acids so that it is homologo
67 we report the identification of an energetic epitope by determining the interfacial hot-spot that dom
69 at focus on conserved elements of the target epitope, by thwarting strain-specific and distracted lin
70 ide evidence that antibody binding to a PorB epitope can be altered by sequence mutations in non-epit
71 mmune recognition of capsular polysaccharide epitopes can aid in the design of novel glycoconjugate v
72 n of red blood cells expressing self-antigen epitopes can alleviate and even prevent signs of disease
73 containing lethal mutations upstream of CTL epitopes can also be recognized by CTLs, potentially thr
74 GFR Abs directed against clinically relevant epitopes can be converted into mAb with unprecedented CD
76 s revealed that the targeted type III repeat epitopes cluster on the inner strands of both beta-sheet
79 igens and predicted cross-reactive microbial epitopes, consistent with neoantigen molecular mimicry.
81 le to identify a MHCII-restricted CD4 T cell epitope, corresponding to amino acids 37-47 in the PVM m
83 e of these V2 Abs revealed how the linear V2 epitope could be engaged, despite the lack of aspartic a
84 e novo design of antibodies binding specific epitopes could greatly accelerate discovery of therapeut
85 or sequence-based epitope prediction both on epitope data derived from solved 3D structures, and on a
86 lts in the majority of the latest two Immune Epitope Database (IEDB) weekly automated benchmark datas
89 boosted with molecules containing the B cell epitope-derived peptide without carrier or linked to oth
90 Tara) to be another such protein through an epitope discovery and proteomics approach by comparing p
94 that mutations at the C-terminal end of this epitope dramatically improve presentation to these T cel
95 formational change in a loop within the PL-2 epitope due to a serine-to-proline mutation, locking the
96 in mice, those recognizing the DENV E-dimer epitope (EDE) can neutralize ZIKV infection in cell cult
98 entially be leveraged in HIV cure efforts if epitope escape and lack of sustained effector memory res
99 both CD4 reactivity and CD4-induced non-nAb epitope exposure, and increase thermal stability while m
100 n the immediate-early MCMV gene ie2 The same epitope expressed within the early M45 gene provided no
102 ble multivalent display of potential allergy epitopes for determining the immunogenicity of each IgE
104 ulent PEDV, but the virus may lose important epitopes for inducing robust protective immunity.IMPORTA
105 first generation native-like trimers expose epitopes for non-neutralizing antibodies (non-nAbs), whi
108 dase coupled with MALDI-MS allowed these two epitopes, for the first time, to be directly identified
109 ve mass spectrometric analyses to define the epitopes formed in tolerant and hypersensitive patients
110 ariants of p145, a conserved helical peptide epitope from the M protein of Streptococcus pyogenes, we
111 eukocyte antigen (HLA)-E and specific for an epitope from UL40 (VMAPRTLIL), which is characterized by
112 alysis of CD8+ T cells specific for a single epitope from Yellow Fever Virus (YFV), we show that the
113 lved sophisticated strategies to conceal Env epitopes from ADCC-mediating antibodies present in HIV+
115 tential HLA-A*02:01-restricted CD8(+) T-cell epitopes from the 693-amino-acid sequence of the VP13/14
116 rays of synthetic oligosaccharides, the LM26 epitope has been identified as a beta-1,6-galactosyl sub
119 combinant vaccinia virus expressing the same epitope if KCSRNRQYL is expressed within the immediate-e
123 sponses to the Plasmodium berghei GAP5040-48 epitope in mice expressing the MHC class I allele H-2D(b
124 We also identify a conserved inflammatory epitope in related proteins from diverse families, and d
126 to a complex, 3-monomer spanning quaternary epitope in the DENV3 envelope (E) protein, but it is unc
128 eloped higher IgG responses against a linear epitope in the gp120 C1 region of the HIV-1 envelope gly
130 immunofluorescence studies indicate that MLG epitopes in brown algae are unmasked by a pre-treatment
132 alleles for immunodominant Gag CD4(+) T cell epitopes in clade C virus infection, constructed MHC cla
133 nto these processes, 27 antibodies targeting epitopes in CMV virion glycoprotein complexes, including
134 ntibodies that target conserved neutralizing epitopes in E2 (HC33.4, HC84.26, and AR3B) and the E1E2
135 immunoinformatic analysis identified T-cell epitopes in H7 hemagglutinin (HA) which potentially enha
137 e genetic restrictions identified within the epitopes in the EDII fusion loop likely explain the sequ
138 ch protein component masked the IgE-reactive epitopes in the other protein component more effectively
140 like trimers that reduce exposure of non-nAb epitopes in the V3-loop and trimer base, minimize both C
142 pe microspores contained primexine-localized epitopes indicative of the presence of xylan, but these
145 hinge-spanning region of the 5J7 quaternary epitope is a target for serotype-specific neutralizing a
147 lic (Allium sativum) bulbs in which the LM26 epitope is widespread throughout most cell walls includi
148 s engineered to improve exposure of specific epitopes is critical for HIV-1 vaccine development.
149 e ability to monitor the occurrence of these epitopes is important as structural changes are associat
150 In this study we tested the low-avidity epitope KCSRNRQYL, and show that a mouse CMV (MCMV) vect
152 57727-734, and the normally subdominant LCMV epitope L2062-2069, indicating a profound private specif
154 ertoire of 29 CTL responses against 23 HIV-1 epitopes longitudinally in nine chronically infected unt
155 loops both adjacent and non-adjacent to the epitope loop can enhance or diminish antibody binding, a
159 arrays were generated to enable the detailed epitope mapping of two monoclonal antibodies known to re
162 ues of E1E2 also resulted in identifying the epitope maps of diverse mAbs and the disulfide connectiv
163 R spectroscopy is extensively used to obtain epitope maps of ligands binding to protein receptors, th
166 shorter sequences and occupy nonoverlapping epitopes more frequently than aptamers with single modif
167 we identified a pathogenic CD8(+) T cell MPO epitope (MPO431-439) and found that cotransfer of MPO431
169 These results show that CTLs constantly lag epitope mutation, suggesting that preventing HIV-1 escap
170 ques have been used to prove the "junctional epitope" nature of VHH6, a camelid single domain antibod
172 oth antibodies bound to quaternary structure epitopes near the hinge region between envelope protein
174 found that both HVEM and UL144 bind a common epitope of BTLA, whether engaged in trans or in cis, tha
175 results identify differences in the binding epitope of cytb 5 in the presence and absence of membran
176 erent residue types to map integratively the epitope of human interleukin-6 receptor (IL-6R) for two
177 response of EF4.1 mice to an I-Ab-associated epitope of the F-MuLV envelope protein is dominated by c
178 one of these sites broadly overlaps with the epitope of the well-known 4B7 mouse antibody, which can
180 vivo model of TCD8 responses to well-defined epitopes of a clinically relevant oncoprotein, large T A
182 ry, Abseq uses specific antibodies to detect epitopes of interest; however, unlike these methods, ant
183 Rs from T cells that recognize the same pMHC epitope often share conserved sequence features, suggest
184 inding, despite the location of the antibody epitope on a domain (Ig1) not reported to bind NK1 or HG
187 oparticles (immunogold) to map the available epitopes on a transferrin grafted silica particle (SiO2-
188 riants obtained by evolving murine antigenic epitopes on an AAV serotype 1 capsid template can evade
189 In this study, we mapped and characterized epitopes on DENV4 recognized by neutralizing antibodies
190 xin, suggesting that human B cells recognize epitopes on the dimerized form of LukAB during natural i
191 tructural features (measured by integrity of epitopes on the Env trimer) in a geographically defined
195 orm other available tools for sequence-based epitope prediction both on epitope data derived from sol
196 ed on several bioinformatic tools for linear epitope prediction, a set of seven peptides was successf
198 he induction of CD4 T cell responses and the epitope preferentially binds MHC class II/IA(k) rather t
199 5B4 and 6H4 recognize structurally distinct epitopes present in the vast majority of Bet v 1 isoform
200 ying the contribution of factors critical to epitope presentation, such as protein cleavage and gene
201 e cells respond to an insulin B-chain (InsB) epitope presented by the HLA-DQ8 molecule associated wit
202 accine, based on priming with multiple ASYMP epitopes (prime) and neurotropic TG delivery of the T ce
203 ght to investigate whether food-specific IgA epitope profiles differ intra-individually between mothe
205 a single MHC class I-restricted high-avidity epitope provided strong, T cell-dependent protection aga
209 ere we characterized a distinct mode of V1V2 epitope recognition by the new bNAb BG1 in which two Fab
211 ly, these data reveal an innate-like mode of epitope recognition with potential implications for the
212 ntified a major difference in conformational epitope recognition, with the nonpathogenic infection be
213 n this study, we report the structure of the epitope recognized by a monoclonal antibody with opsonop
214 nt functional type: allotypes having the Bw4 epitope recognized by killer cell Ig-like receptors of N
216 ivotal in the generation of the K-epsilon-GG epitope recognized during IAP, here we developed a large
220 structural characterization of these glycan epitopes remains a significant challenge in mAb preclini
221 ll and serum antibody responses with broader epitope representation and greater durability than with
223 e p17 R76G mutant which enables a functional epitope(s), masked in refp17, to elicit B-cell growth-pr
224 thermore, HLA-DR molecules encoded by shared-epitope (SE) alleles were predicted to bind these self-
225 (HLA)-DRB1 gene (HLA-DRB1) encode a "shared epitope" (SE) associated with rheumatoid arthritis (RA),
226 it is homologous with a known H3 immunogenic epitope sequence significantly improved the immunogenici
227 active between a newly defined putative MCMV epitope sequence, M57727-734, and the normally subdomina
232 bergine glycans contain abundant heteroxylan epitopes, some of which are associated with both pectin
233 rphism shapes the relative abundance of self-epitope specific Treg cells that leads to protection or
234 icroscopy (dSTORM) to show that certain CD4i epitopes specific to transition state structures are exp
235 Our results confirm that a diverse set of epitope-specific AHAs can be isolated from a single huma
236 pt application for the rational design of an epitope-specific antibody binding with the target protei
239 n determining immunodominance hierarchy, and epitope-specific CD8(+) T cell requirements for costimul
242 to the generalizable, underlying features of epitope-specific repertoires and adaptive immune recogni
243 Notably, the cyclic designs induced greater epitope-specific responses and neutralization than the n
244 report the in-depth characterization of ten epitope-specific TCR repertoires of CD8(+) T cells from
246 humoral assays, we evaluated the magnitudes, epitope specificities, avidities, and functions of syste
249 eling of monoclonal AQP4-IgGs with differing epitope specificity bound to isolated tetramers (M1-AQP4
250 Antibody, cellular immune responses, and epitope specificity in sensitized mice were investigated
252 ugh MCMV vectors expressing the high-avidity epitope SSIEFARL induced protective immunity irrespectiv
253 itive to antibodies targeting nonoverlapping epitopes, such as the anti-CD4-binding-site antibodies 3
254 ted Cas9 protein fused to repetitive peptide epitopes (SunTag) recruiting multiple copies of antibody
256 lymphoblastoid cell lines (LCLs), expressing epitope-tagged EBNA3A, EBNA3B or EBNA3C from EBV-recombi
259 ription factor genes; (3) simple knock-in of epitope tags and fluorescent reporters (e.g. Sox2-V5 and
260 in expressing two Cdc20 genes with different epitope tags, we show by co-immunoprecipitation that thi
261 The neutralizing antibody responses and the epitopes targeted against DENV4 have not been characteri
263 n addition, MSB0010853 contains a third HER3 epitope that binds albumin to extend its circulation tim
264 zed the lateral patch, the principal exposed epitope that did not change when pdm2009 displaced previ
266 of the TcdA CROPs helped define a conserved epitope that is distinct from previously identified carb
267 nogens based on the structure of a conserved epitope that is the target of broadly neutralizing antib
268 referential loss of T-cell reactivity to Mtb epitopes that are homologous to bacteria in the microbio
269 inhibited the response to two immunodominant epitopes that are known to be dependent on Ag cross-pres
271 ptor:chemokine interfaces, and suggest novel epitopes that can be exploited to overcome these challen
272 nt variants, and the presence of distracting epitopes that entropically disfavor the evolution of bnA
273 mino acids within the antigenic determinant (epitope), the whole proteome can be represented by a ran
274 emblies of peptides and the relevant protein epitopes, this work illustrates a bioinspired approach t
275 ed with the glycoprotein B DYSNTHSTRYV (DYS) epitope to characterize circulating CD4(+) T cells in co
276 lls in case of toxicity; and (4) a CD34-CD20 epitope to facilitate selection of the engineered cell p
278 inactivation; and (iii) exposure of cryptic epitopes to antibodies, allowing virus neutralization.
281 , gamma-gliadins, LMW subunits and antigenic epitopes to gain a better understanding of the technolog
282 of experimentally mapped Der f 1/Der p1 IgG epitopes to the same surface patch on Blo t 1, as well a
284 From this analysis, we not only identified epitopes unique to Zika and Dengue, but also identified
285 pecific IgE and challenged with Pen a 1 (IgE epitope valency of >/=8), although measurable responses
287 NV4/3 virus containing the most expanded 5J7 epitope was also significantly more sensitive than WT DE
288 or histocompatibility complex class (MHC-II) epitope was identified, based on in silico prediction co
289 ility, cluster size and accessibility to myc-epitopes we show that forces acting on the transmembrane
290 ts of immunodominance among several dominant epitopes, we utilized a cell free antigen processing sys
291 d HLA-A2-restricted HCV NS3-1073 or NS5-2594 epitope were generated from a genotype 2a-derived HCV cl
292 t neutralized DENV4 were isolated, and their epitopes were finely mapped using recombinant viruses an
293 lar cytotoxicity favored a membrane-proximal epitope, whereas Ab-dependent cellular phagocytosis favo
294 ldren recognize deamidated and native gluten epitopes, whereas T cells from adults only recognize dea
295 and identify an immune-dominant neutralizing epitope, which can be exploited for vaccine development.
296 y a monomer that does not display quaternary epitopes, which may explain the modest success with solu
297 d not inhibit the response to "inflationary" epitopes whose responses can be sustained by infected no
298 had an immunodominant response to the Gag293 epitope with a functional avidity intermediate between t
299 al antibody (mAb) LE2E9 revealed overlapping epitopes with murine C1-specific group A mAbs including
300 r the discovery of a continuous neutralizing epitope within the UL128 subunit of the PC that could be
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