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1 osynthesis gene clusters strongly suggest an evolutionary relationship.
2 n this review we discuss examples of this co-evolutionary relationship.
3  analysis of their genomic organizations and evolutionary relationship.
4 ommon structural features derived from their evolutionary relationship.
5  sequence level, which indicates their close evolutionary relationship.
6 ukaryotic actin and tubulin, revealing their evolutionary relationship.
7 butions within regions vary independently of evolutionary relationship.
8 nd Spodoptera exigua) had a relatively close evolutionary relationship.
9 and hepatitis E virus, suggesting a possible evolutionary relationship.
10 tic tools that require bifurcating tree-like evolutionary relationships.
11 ely determine their taxonomic identities and evolutionary relationships.
12 predict their functions and understand their evolutionary relationships.
13  estimating ages from different databases of evolutionary relationships.
14 e not explicitly incorporated information on evolutionary relationships.
15 gth polymorphisms (AFLPs) for resolving deep evolutionary relationships.
16 structure and function, yet do maintain some evolutionary relationships.
17 n tertiary structure and/or protein sequence evolutionary relationships.
18  unite molecular details with ecological and evolutionary relationships.
19 erring the functions of genes based on their evolutionary relationships.
20 ents accord with previous estimates of their evolutionary relationships.
21 he value of this approach for exploration of evolutionary relationships.
22 enome sequence allows investigation of these evolutionary relationships.
23 ngi to test if RADseq can reconstruct robust evolutionary relationships.
24 en hindered by a poor understanding of their evolutionary relationships.
25 e in a hierarchy according to structural and evolutionary relationships.
26 des and insects raises questions about their evolutionary relationships.
27 ates, leaving open the possibility of deeper evolutionary relationships.
28 genotypes as well as a tree describing their evolutionary relationships.
29 nd homoplasy, confound the interpretation of evolutionary relationships.
30  annotations that have been inferred through evolutionary relationships.
31 l susceptibility, genetic data, and inferred evolutionary relationships.
32 d proteins according to their structural and evolutionary relationships.
33  raises questions as to their structural and evolutionary relationships.
34 e in a hierarchy according to structural and evolutionary relationships.
35 h phylogenetic trees as a model of capturing evolutionary relationships.
36 fe have focused either on the nature of deep evolutionary relationships(3-5) or on the known, well-cl
37 -based discovery of four molecules and their evolutionary relationships: a poaeamide analogue and a m
38                 This allows the appraisal of evolutionary relationships across entire TCSs and in som
39 ckets thereby finding protein functional and evolutionary relationships across fold space.
40                              Results suggest evolutionary relationships across several previously evo
41                                      Such an evolutionary relationship allows structure prediction of
42  that the two halves of tRNAs had an evident evolutionary relationship, although it is not totally cl
43 ss in the phylogenetic representation of the evolutionary relationship among distant protein families
44  Our statistical evaluation incorporates the evolutionary relationship among genomes, a key aspect th
45 ibed pathway for m-DAP synthesis supports an evolutionary relationship among the chlamydiae, cyanobac
46     Therefore, in addition to confirming the evolutionary relationship among the three abundant envel
47 al, and Smooth muscle data recapitulates the evolutionary relationship among the three tissues.
48 gout uses multiple references along with the evolutionary relationship among these references in orde
49 ances among these sequence correspond to the evolutionary relationship among these sequences.
50 l lineage of the scaffolds, with evidence of evolutionary relationships among alginolytic gene cluste
51 xploited as phylogenetic characters to infer evolutionary relationships among all superfamilies.
52                Long-held ideas regarding the evolutionary relationships among animals have recently b
53                                              Evolutionary relationships among birds in Neoaves, the c
54  become a useful approach in determining the evolutionary relationships among different strains of R.
55                     Our findings demonstrate evolutionary relationships among diverse AEEC pathogens
56                    This work illuminates the evolutionary relationships among enzymes within this une
57 hyly and consensus is rapidly emerging about evolutionary relationships among extant lineages, the fo
58  The concept of orthology is key to decoding evolutionary relationships among genes across different
59                                    Inferring evolutionary relationships among highly divergent protei
60  relationships among proteins and may detect evolutionary relationships among highly divergent sequen
61                             By analyzing the evolutionary relationships among internalins, a relative
62 t, scientists using physical traits to study evolutionary relationships among living and extinct anim
63 enes has proven effective in helping resolve evolutionary relationships among luminous bacteria.
64 of a eukaryotic CSAS gene and sheds light on evolutionary relationships among metazoan CSAS proteins.
65                           Analyses of clonal evolutionary relationships among multilocus genotypes wi
66 n hosts and vectors, depends on knowledge of evolutionary relationships among parasite lineages.
67                                              Evolutionary relationships among PaVE reference protein
68                                 However, the evolutionary relationships among piRNAs and other small
69 truction is a powerful approach for studying evolutionary relationships among protein sequence, struc
70                                  Using known evolutionary relationships among protein superfamilies i
71  family; (ii) the FFP tree detects potential evolutionary relationships among some viral families; (i
72                                              Evolutionary relationships among species are often assum
73 nclusions was made possible by including the evolutionary relationships among species.
74                                          The evolutionary relationships among the algal sHSPs and hom
75                                              Evolutionary relationships among the eight major lineage
76 repeat, and that it is possible to infer the evolutionary relationships among the IGS subrepeats of d
77 ive sequencing of transcriptomes reveals the evolutionary relationships among the major flatworm line
78 data were sufficient to reliably reconstruct evolutionary relationships among the plant taxa in the p
79              In this review, we focus on the evolutionary relationships among the proteins of the euk
80 throughout the world and examine whether the evolutionary relationships among the species comprising
81 oughout the canine nuclear genome to analyse evolutionary relationships among the three largest Europ
82 protein structures aids the understanding of evolutionary relationships among them.
83 lar importance in accurate reconstruction of evolutionary relationships among trypanosomatids.
84 ithm is a standard method for estimating the evolutionary relationships amongst a set of species base
85 s a method and associated database inferring evolutionary relationships amongst currently 1706 comple
86 e used to explore phage diversity and define evolutionary relationships amongst these phages.
87 of the respective subfamily supporting their evolutionary relationship and defining them as pharmacol
88 s (after rigid-body superposition), but also evolutionary relationship and hydrogen-bonding similarit
89 ions did not correlate to known taxonomic or evolutionary relationships and deletions occurred indepe
90    Using our best hypothesis of polyomavirus evolutionary relationships and established host phylogen
91 ed an unprecedented amount of data about the evolutionary relationships and functional traits of micr
92 owledge base for understanding BAHD members' evolutionary relationships and gene functions implicated
93 ethods yielded the most robust hypothesis of evolutionary relationships and genetic diversity within
94         Phylogenetic studies aim to discover evolutionary relationships and histories.
95 ovide further insight into diverse microbial evolutionary relationships and immune evasion function.
96                         However, the precise evolutionary relationships and origins of these signalli
97 species with a special emphasis on inferring evolutionary relationships and patterns of DNA and prote
98 pletely to a diversity tree summarizing both evolutionary relationships and species richness of 44 ma
99 and comparative genomics were used to assess evolutionary relationships and to detect gene content di
100 ith an aim toward better understanding their evolutionary relationships and transcriptional potential
101 scovering information such as functional and evolutionary relationships, and also for discriminating
102 shrunk dramatically by eliminating redundant evolutionary relationships, and this process is efficien
103 nto gene families and subfamilies, and their evolutionary relationships are captured in phylogenetic
104 e incorrect, both locally and globally, when evolutionary relationships are inferred incorrectly or t
105 ce genes has been extensively studied, their evolutionary relationships are not well-understood.
106  have six cryptochrome (cry) genes but their evolutionary relationships are not yet fully resolved.
107 being most homologous to ETR1 based on their evolutionary relationship as well as containing histidin
108         These may still reflect more distant evolutionary relationships as well as unique physico-che
109  (delta(13)C, delta(15)N) data to reveal the evolutionary relationships, as well as diet and feeding
110 solvases are consistent with their predicted evolutionary relationship based on sequence analysis.
111         Molecular phylogenomics investigates evolutionary relationships based on genomic data.
112 sted to be useful characters for identifying evolutionary relationships because they constitute synap
113               Here, we investigate a similar evolutionary relationship between a subset of miRNA prec
114 maltose transporters to begin a study of the evolutionary relationship between a transporter's functi
115 ein in necroptosis, revealing a transkingdom evolutionary relationship between amyloid-controlled fun
116 r fragrance phenotype, demonstrating a close evolutionary relationship between Basmati varieties and
117                                    The close evolutionary relationship between canines and humans may
118                            By clarifying the evolutionary relationship between centra and arches, and
119  issue of Developmental Cell, to analyze the evolutionary relationship between cilia and various sign
120 sh (Danio rerio), additionally examining the evolutionary relationship between drug transporters in z
121  Based on these results, there is an ancient evolutionary relationship between epsilon-like retroviru
122 study we report novel findings regarding the evolutionary relationship between gene duplication and a
123 odel system for the investigation of general evolutionary relationship between genome attributes such
124 tegrated into a perturbation analysis of the evolutionary relationship between genotype and phenotype
125                                    Given the evolutionary relationship between group II and nuclear i
126  immunity in vertebrates, suggesting a close evolutionary relationship between innate and adaptive im
127                          We demonstrated the evolutionary relationship between Magnaporthe species an
128 and biochemical analysis revealed a possible evolutionary relationship between miRNA precursors and s
129 umans first appeared and (2) the genetic and evolutionary relationship between modern humans and earl
130 tance measure can accurately reconstruct the evolutionary relationship between multiple cancer types.
131 ession of the cancer markers and reconstruct evolutionary relationship between multiple types of canc
132 tro than mammalian TET1, supporting a closer evolutionary relationship between NgTET1 and the base J-
133                                       The co-evolutionary relationship between pathogen and host has
134 mprove our ability to effectively define the evolutionary relationship between photosymbiosis and ree
135                          Here we examine the evolutionary relationship between primary tumor, lymph n
136  studies that examine various aspects of the evolutionary relationship between protein dynamics and t
137 rity, and amino acid conservation demands an evolutionary relationship between proteins is shown to s
138                      This study outlines the evolutionary relationship between ribose- and inositol-b
139 ely reflects high information content and an evolutionary relationship between RNA domain structure a
140 understand the substrate specificity and the evolutionary relationship between the acyltransferase (A
141   Additionally, our work suggests a possible evolutionary relationship between the chitin and Nod fac
142 sible experimental evidence in vitro for the evolutionary relationship between the cupredoxin protein
143 ionary nups and soluble NTRs and suggests an evolutionary relationship between the NPC and the solubl
144                                          The evolutionary relationship between the two proteins has a
145 tive splicing are negatively correlated, the evolutionary relationship between the two remains unclea
146                 There is no consensus on the evolutionary relationship between the two taxa.
147                                The purported evolutionary relationship between the two-domain MCOs an
148 res of ICOSL and B7 isoforms suggest a close evolutionary relationship between these costimulatory li
149                                          The evolutionary relationship between these genes is of inte
150 three-dimensional structure evidence for the evolutionary relationship between troponin I and troponi
151 e different pathogenicity phenotypes and the evolutionary relationship between type A and type B stra
152 be allergens may actually lie in the long co-evolutionary relationship between worms and their verteb
153 oach to examine the pattern of diversity and evolutionary relationships between 45 BKV strains isolat
154  revisit the origins of VACV and propose new evolutionary relationships between ancient and extant VA
155 sis for this diversity, we have examined the evolutionary relationships between Antirrhinum species a
156 se results raise further questions about the evolutionary relationships between arsenite oxidases (Ao
157              Phylogenetic analysis indicated evolutionary relationships between Avl9p and regulators
158 ond, we sought to shed light on the possible evolutionary relationships between biomineralization in
159  rex proteins and used them to establish the evolutionary relationships between birds and dinosaurs.
160                   They also suggest possible evolutionary relationships between Darmbrand strains and
161 ich may denote changes in the functional and evolutionary relationships between different brain regio
162 ony and likelihood techniques to analyze the evolutionary relationships between duplication blocks.
163  genetic studies have shed some light on the evolutionary relationships between European aurochs and
164                     In FUM gene genealogies, evolutionary relationships between fusaria with differen
165 mparative phylogenomic analysis to study the evolutionary relationships between GC content, CpG-dinuc
166 ent free, distance measure that reflects the evolutionary relationships between genomic sequences.
167           This study underscores the complex evolutionary relationships between HSV and its host.
168 lso use this isopeptidase as a tool to study evolutionary relationships between lasso peptide gene cl
169 amental source of data for understanding the evolutionary relationships between major arthropod group
170 data provides new insights to understand the evolutionary relationships between MULE, hAT and Transib
171 currently the accepted paradigm to represent evolutionary relationships between organisms, species or
172 how DNA sequence differences allow inferring evolutionary relationships between organisms, we and oth
173        However, knowledge of the genetic and evolutionary relationships between phage types is very l
174                                              Evolutionary relationships between protein kinases are o
175 t is an important tool for understanding the evolutionary relationships between proteins.
176 ic analyses can be integrated to investigate evolutionary relationships between recently diverged tax
177                                Understanding evolutionary relationships between species can shed new
178 phylogenetic framework that accounts for the evolutionary relationships between species, allows for m
179 r treatment to phylogenetics for identifying evolutionary relationships between species.
180 dies and can be used to successfully resolve evolutionary relationships between taxa at scales from t
181 n structure, changes in population size, and evolutionary relationships between taxa, at a much great
182                                          The evolutionary relationships between the earliest branches
183                            The molecular and evolutionary relationships between the forming nervous s
184 ry of an ancient protein complex reveals the evolutionary relationships between the proteins that hel
185 he HFD phylogeny closely recapitulated known evolutionary relationships between the species, supporti
186 ed in combination, even after accounting for evolutionary relationships between the species.
187 ved motifs provided further insight into the evolutionary relationships between these genes.
188   However, uncertainty remains regarding the evolutionary relationships between two ancient animal li
189                       To study the potential evolutionary relationships between VCBPs and vertebrate
190 re, to obtain a comprehensive picture of the evolutionary relationships between viruses, network anal
191 ten quite different, sometimes despite close evolutionary relationships between viruses.
192 annotating genetic sequences and determining evolutionary relationships both in terms of accuracy and
193 significant among proteins that have a clear evolutionary relationship, but that there is a significa
194 iology is to infer functional, structural or evolutionary relationships by querying a database using
195                          We demonstrate that evolutionary relationships can be measured with phylogen
196      The PANTHER (protein annotation through evolutionary relationship) classification system is a co
197        The PANTHER (Protein ANalysis THrough Evolutionary Relationships) classification system was us
198                       It also showed that co-evolutionary relationships existed between cognate partn
199 traditional approach only vaguely represents evolutionary relationships, fails to denote major events
200  Phylogenetic analysis revealed conservative evolutionary relationships for most NRs, which were cons
201          It enables researchers to study the evolutionary relationships for specific groups of protei
202 ty within the overall response parallels the evolutionary relationships, >50% of the best scoring put
203                                   Deep avian evolutionary relationships have been difficult to resolv
204 p to 1 meter in diameter), yet their precise evolutionary relationships have been elusive, hindering
205 tions in that it groups domains primarily by evolutionary relationships (homology), rather than topol
206 e show that SOIPPA is able to detect distant evolutionary relationships in cases where both a global
207 phic boundaries suggests a stronger role for evolutionary relationships in shaping plant interactions
208 nally, our study provides novel insight into evolutionary relationships in this large and diverse fam
209     Previous molecular analyses of mammalian evolutionary relationships involving a wide range of pla
210      Understanding the consequences of these evolutionary relationships is important for the both the
211 th are insects and thus, understanding their evolutionary relationships is key to understanding the e
212 Comparative neuroscience research, framed by evolutionary relationships, is key to interpreting conne
213 ults from Chlamydomonas, the data suggest an evolutionary relationship may exist between the repeat s
214                                 Further, the evolutionary relationship observed between 1982 H14 and
215    Analysis of the sequence conservation and evolutionary relationship of ACMSD-related proteins sugg
216 These studies have provided insight into the evolutionary relationship of fungal terpene synthases to
217                              Furthermore, an evolutionary relationship of group II introns to eukaryo
218 hal genome advances our understanding of the evolutionary relationship of Homo sapiens and Homo neand
219 lity of a Neanderthal genome sequence is the evolutionary relationship of humans and Neanderthals.
220  of RNA encapsidation not only delineate the evolutionary relationship of negative-strand RNA viruses
221 the full coding potential of 64; and (v) the evolutionary relationship of patterns in stop codons to
222 en illustrated in some previous studies, the evolutionary relationship of plant PDATs has not been st
223 rmation of the PurLSQ complex as well as the evolutionary relationship of PurLs from different organi
224             Finally, our tool determines the evolutionary relationship of query sequences to the data
225     This study provides new insight into the evolutionary relationship of ROK glucokinases and non-RO
226 ate selenocysteine, thereby establishing the evolutionary relationship of SMT and homocysteine methyl
227                            Insights into the evolutionary relationship of the duplicated alpha-gliadi
228           In this study, we investigated the evolutionary relationship of the PDAT gene family across
229                                    The exact evolutionary relationship of these species to the other
230 ere used to assess the genetic diversity and evolutionary relationships of 67 Fusarium strains from v
231 nnotated RTnS reads can be used to infer the evolutionary relationships of A. thaliana.
232 ts raise interesting questions regarding the evolutionary relationships of class II membrane fusogens
233 tid genotyping enables a reassessment of the evolutionary relationships of cytoplasms in cultivated m
234 s archaeal primosome complex broadly impacts evolutionary relationships of DNA replication.
235 acterized the virulence gene content and the evolutionary relationships of Escherichia coli isolates
236                                          The evolutionary relationships of extinct species are ascert
237                We assessed the taxonomic and evolutionary relationships of five Brucella species-Bruc
238 zation, transcriptional status, phylogenetic/evolutionary relationships of GLTP genes.
239  While great progress toward discovering the evolutionary relationships of major animal groups has be
240                                 However, the evolutionary relationships of many groups remain unclear
241         Phylogenetics, or reconstructing the evolutionary relationships of organisms, is critical for
242 fied Pi-ta protein variants demonstrated the evolutionary relationships of Pi-ta haplotypes between O
243 only used to assess the functional roles and evolutionary relationships of proteins and protein famil
244  to characterize the structure, function and evolutionary relationships of proteins.
245 hropod apyrases were used to reconstruct the evolutionary relationships of salivary-expressed apyrase
246 ormation on the population structure and the evolutionary relationships of the pathogen is crucial.
247  of life projects aimed at understanding the evolutionary relationships of the planet's largest clade
248 of these groups does not conform to expected evolutionary relationships of the species, and our analy
249                                          The evolutionary relationships of the thiamine pyrophosphate
250 tases of one melanoma patient to exhibit the evolutionary relationships of their subpopulations.
251 ion, the controversial generic placement and evolutionary relationships of these two species are disc
252        Five genes were used to determine the evolutionary relationships of these worms within Cirratu
253 oding regions, which were used to assess the evolutionary relationships of these Y. pestis strains.
254 cular approaches to bear on the identity and evolutionary relationships of ungulate malaria parasites
255 is a suite of tools for analyzing reticulate evolutionary relationships, or evolutionary networks, wh
256                     Protein Analysis THrough Evolutionary Relationships (PANTHER) is a comprehensive
257 vestigated their intracellular localization, evolutionary relationships, patterns of expression and t
258 ) molecules is important for revealing their evolutionary relationships, predicting their functions a
259  dinosaur bone may validate hypotheses about evolutionary relationships, rates, and patterns of molec
260 lection pressure due to protein folding, and evolutionary relationship reflected by global sequence a
261 he best-studied groups of animals, yet their evolutionary relationships remain poorly resolved.
262 etazoans, but the knowledge we have of their evolutionary relationships remains unclear.
263 r understanding host-endosymbiont/parasitoid evolutionary relationships, resolving species complexes
264 he Statistical Inference of Function Through Evolutionary Relationships (SIFTER) framework uses a sta
265                  Attempts to reconstruct the evolutionary relationships suffered from questionable re
266 vides an independent and powerful measure of evolutionary relationships that does not rely on potenti
267                                 Based on its evolutionary relationship to activation-induced deaminas
268 tor of Ctr1 activity, but its functional and evolutionary relationship to Ctr1 is unclear.
269                     Despite TAHRE's apparent evolutionary relationship to HeT-A, we find TAHRE Gag ca
270 sis and vaccine development due to its close evolutionary relationship to human CMV (HCMV).
271 stand the potential origins of DCs and their evolutionary relationship to lymphocytes.
272  eukaryotic mRNA decapping but also bears an evolutionary relationship to the eukaryotic decapping en
273  we discuss likely causes for TFs' different evolutionary relationship to the physical interaction ne
274 e of these results in relation to a possible evolutionary relationship to viroids is discussed.
275 e absence of HV but also suggests a possible evolutionary relationship to viroids that replicate in t
276 ons of uncharacterized genes, based on their evolutionary relationships to genes with functions known
277 ed phylogenetic distribution have left their evolutionary relationship unresolved.
278 genomes for sequencing on the basis of their evolutionary relationships, we have sequenced and analys
279 derstand the underlying mechanisms and their evolutionary relationships, we must define each mode and
280 een recently developed to analyze reticulate evolutionary relationships, which include SplitsTree4, L
281 the most widely used method to detect remote evolutionary relationships, which relies upon the accumu
282 reum (LGV) clinical isolates demonstrated an evolutionary relationship with disease phenotype, with L
283 Recently, it has been suggested that a close evolutionary relationship with humans could result in si
284 erent perspective, elucidating aspects of an evolutionary relationship with mammals that extends acro
285  Myoviridae and Siphoviridae phages, have an evolutionary relationship with other cellular biological
286 human genes is complicated by the very close evolutionary relationship with our nearest extant primat
287  MDA5 helicase-insert domain demonstrates an evolutionary relationship with the archaeal Hef helicase
288 s phylogenetic analysis, YSLV6 shows a close evolutionary relationship with YSLV1 to -4, whereas YSLV
289 hown to exist, they would share no necessary evolutionary relationships with events during early mole
290 hortage of derived characters obscures their evolutionary relationships with extant phyla (Onychophor
291 erns of transmission, disease mechanisms and evolutionary relationships with their hosts.
292  soybean Rpg1b and Rpg1r genes share a close evolutionary relationship, with Rpg1b containing a recom
293 nd K(a) clocks may be used to explore deeper evolutionary relationships within and across poliovirus
294 ogical neural characters have helped clarify evolutionary relationships within Arthropoda, particular
295 2 are also recognized, a complete picture of evolutionary relationships within the C2 domain superfam
296 domains are found only in GH43 proteins, the evolutionary relationships within the GH43 family were i
297  myriapods and to attempt to reconstruct the evolutionary relationships within the Myriapoda and Arth
298 ong these elements and highlight the tangled evolutionary relationships within the phageome.
299 bilaterian clade Spiralia, but to date, deep evolutionary relationships within this group have been s
300 ile characters, and their use for polarizing evolutionary relationships, without reference to gene an

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