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1 eristic and power over interval mapping with expectation maximization.
2 f Bayesian inference, effectively performing expectation maximization.
3 onstructed using pixel-based ordered-subsets expectation maximization.
4 ce for Q.Clear, compared with ordered-subset expectation maximization.
5 mation technique termed variational Bayesian expectation maximization.
6 tral amino acid composition that is based on expectation-maximization.
7 d with either 2D or fully 3D ordered-subsets expectation maximization (2 iterations and 8 subsets; 2D
8 version 1.5-the 3-dimensional ordered-subset expectation maximization (3DOSEM) and the 3-dimensional
10 were reconstructed using an ordered-subsets expectation maximization algorithm and were corrected fo
11 econstructed by using the maximum likelihood-expectation maximization algorithm and were corrected fo
13 onstruction, an iterative maximum likelihood-expectation maximization algorithm is used that models t
15 rved variants to increase sensitivity and an expectation maximization algorithm that iteratively reca
18 method that uses Hidden Markov Models and an Expectation Maximization algorithm to detect such module
19 n with robust variance and a bootstrap-based expectation maximization algorithm to handle extensive m
25 n and model selection and can be fit with an expectation maximization algorithm, we call Cox-assisted
31 and reconstructed with a maximum-likelihood expectation maximization algorithm; the system model inc
33 roblem is set in a likelihood framework, the expectation-maximization algorithm allows the incomplete
35 plotype frequencies were generated using the expectation-maximization algorithm and compared between
36 imating the frequency of haplotypes with the expectation-maximization algorithm and comparing haploty
37 mple, iterative procedure that relies on the expectation-maximization algorithm and that uses standar
38 plotype frequencies were generated using the expectation-maximization algorithm and were compared bet
39 three groups using k-means clustering or the expectation-maximization algorithm applied to a Gaussian
41 ion of methods of moments procedures and the expectation-maximization algorithm are used to estimate
42 using the Associate program to implement the expectation-maximization algorithm based on the gene-cou
43 pirical parameters, Bisulfighter can use the expectation-maximization algorithm for HMMs to adjust pa
44 model for stochastic networks and develop an expectation-maximization algorithm for identifying stoch
46 transcription factors and have developed an Expectation-Maximization algorithm for statistical infer
48 e present a finite mixture framework with an expectation-maximization algorithm that considers two mo
50 which we call SeqEM, applies the well-known Expectation-Maximization algorithm to an appropriate lik
52 for motif discovery, EXTREME uses the online expectation-maximization algorithm to discover motifs.
53 l to represent the consensus map and use the expectation-Maximization algorithm to drive the refineme
55 by cases with missing subtype, by using the expectation-maximization algorithm to estimate risk para
56 marker interval, we describe how to use the expectation-maximization algorithm to examine the probab
57 st one crossover, we describe how to use the expectation-maximization algorithm to examine the probab
59 ation, inverse probability weighting, or the expectation-maximization algorithm to impute missing dat
60 , we use an iterative process similar to the expectation-maximization algorithm to infer missing SNPs
61 maximum-likelihood approach together with an expectation-maximization algorithm to jointly estimate a
63 nd predicted ratings can be inferred with an expectation-maximization algorithm whose running time sc
64 ion, we estimated fusion abundance using the Expectation-Maximization algorithm with sparse optimizat
65 e mixture model could be estimated using the expectation-maximization algorithm with the observed dis
66 We propose cnvCSEM (CNV-guided ChIP-Seq by expectation-maximization algorithm), a flexible framewor
68 rence methods such as Clark's algorithm, the expectation-maximization algorithm, and a coalescence-ba
70 stimated haplotypes were generated using the expectation-maximization algorithm, and frequencies of t
71 ies compared to the standard HMM based on an expectation-maximization algorithm, leading to more accu
72 can all be optimized automatically using the expectation-maximization algorithm, taking the number of
73 ian mixture models, l1 minimization, and the expectation-maximization algorithm, we prove that spectr
74 nery of probabilistic mixture models and the expectation-maximization algorithm, we show that it is p
75 he baseline line-of-response ordered-subsets expectation-maximization algorithm, with the baseline al
76 hen the haplotype phase is unobserved is the expectation-maximization algorithm, with the likelihood
90 haplotypes inferred from genotypes using an expectation-maximization algorithm; and (3). as unphased
93 structed using 2-dimensional ordered-subsets expectation maximization and 3-dimensional maximum a pos
94 re reconstructed using 3D maximum-likelihood expectation maximization and analyzed with software.
96 were reconstructed using both ordered-subset expectation maximization and Q.Clear (block-sequential r
97 , and haplotype frequencies were obtained by expectation-maximization and maximum-likelihood estimati
98 pplied a modified SSD method, as well as the expectation-maximization and partition-ligation algorith
99 onte Carlo -based posterior inference and an expectation maximization-based algorithm for posterior a
100 a top-down approach, utilizing the powerful expectation maximization classification algorithm to exa
102 serving that it is essentially a form of the expectation maximization (EM) algorithm applied to the c
103 ed on haplotype data with a variation of the expectation maximization (EM) algorithm for haplotype in
105 es an effective bias removal with a weighted expectation maximization (EM) algorithm to distribute re
106 Bayesian statistical model and a variational expectation maximization (EM) algorithm to estimate non-
107 To test the hypothesis, we used an iterative expectation maximization (EM) algorithm to quantify tran
113 able optimization problem and rely either on expectation maximization (EM) or on local heuristic sear
115 ompare the Fisher scoring algorithm with the expectation maximization (EM)-based ML method, we also d
117 de maximum likelihood estimation (MLE) using expectation maximization (EM); the set cover approach ma
118 es and heritabilities using a combination of expectation-maximization (EM) algorithm and average info
119 ate liabilities as missing values so that an expectation-maximization (EM) algorithm can be applied h
121 ed region using an empirical approach and an expectation-maximization (EM) algorithm developed for es
124 such statistical methods typically apply the expectation-maximization (EM) algorithm for inference.
125 oform reconstruction problem, and provide an expectation-maximization (EM) algorithm for its maximum
128 eater accuracy than the implementation of an Expectation-Maximization (EM) algorithm incorporated in
129 ave been developed for motif-finding use the expectation-maximization (EM) algorithm iteratively.
131 and Waterman proposed one such model and an expectation-maximization (EM) algorithm to estimate sequ
135 and many other popular motif finders use the expectation-maximization (EM) algorithm to optimize thei
136 a sample of individuals that make use of the expectation-maximization (EM) algorithm to overcome the
140 es of model parameters are obtained using an expectation-maximization (EM) algorithm, and pseudogenes
143 such essential domains, we have developed an Expectation-Maximization (EM) algorithm-based Essential
144 on a case-parent trio family design, we use expectation-maximization (EM) algorithm-derived haplotyp
147 alization procedure that, when combined with expectation-maximization (EM) algorithms for parameter e
149 s, based on penalized likelihood methods and expectation-maximization (EM) algorithms, are studied an
152 proach combining a greedy algorithm with the Expectation-Maximization (EM) method for haplotype infer
153 hod utilizing a sequential Monte Carlo-based expectation-maximization (EM) optimization to improve pe
155 ruction with at least 120 maximum likelihood expectation maximization equivalent iterations, includin
158 Hidden Markov Models (HMMs) were used with Expectation/Maximization for denoising and for associati
161 um (LD) statistics (Haploview) as well as by expectation-maximization haplotype phase inference (HAP)
162 tistical algorithms (both Gibbs sampling and expectation-maximization) in reconstructing haplotype ph
163 nd reconstructed by use of ordered-subset(s) expectation maximization, incorporating corrections for
164 econstructed by 2-dimensional ordered-subset expectation maximization into single-frame images and dy
166 state-of-the-art methods, including K-means, expectation maximization, latent Dirichlet allocation-ba
171 ring accuracy can be achieved using the soft expectation maximization method, whereby each sequence i
174 jection (IFBP) and the maximum likelihood by expectation maximization (ML-EM) reconstruction algorith
175 on (FBP) and an iterative maximum-likelihood expectation maximization (MLEM) algorithm incorporating
177 s, we developed a clustering method based on expectation maximization of a Gaussian mixture that acco
179 unctions for estimating model parameters, by expectation maximization or related approaches; however,
180 computational haplotype construction with an expectation-maximization or Bayesian statistical algorit
181 asurements indicated that the ordered-subset expectation maximization (OSEM) algorithm may produce le
182 ction was performed using an ordered-subsets expectation maximization (OSEM) algorithm with compensat
183 nstruction, such as with the ordered-subsets expectation maximization (OSEM) algorithm, improves diag
185 riance characteristics of the ordered-subset expectation maximization (OSEM) and rescaled block-itera
187 on and also with standardized ordered-subset expectation maximization (OSEM) known to fulfill EANM ha
188 ratio for a range of BPL and ordered-subset expectation maximization (OSEM) reconstructions on a PET
189 ratio for a range of BPL and ordered-subset expectation maximization (OSEM) reconstructions on a PET
190 nal reconstruction method of ordered-subsets expectation maximization (OSEM) with 28 subsets and with
191 iltered backprojection (FBP); ordered-subset expectation maximization (OSEM) with attenuation correct
192 onstruction package including ordered-subset expectation maximization (OSEM) with depth-dependent 3-d
193 red backprojection (FBP) and ordered-subsets expectation maximization (OSEM) without any scatter or a
194 anner and reconstructed using ordered-subset expectation maximization (OSEM), OSEM with point-spread
196 image reconstruction via the ordered-subsets expectation-maximization (OSEM) and attenuation-weighted
197 T attenuation correction and ordered-subsets expectation maximization [OSEM] reconstruction) were ret
198 the computational efficiency of LLR, a novel expectation-maximization-path (EM-path) algorithm has be
199 tion methodology, which we call perturbation expectation-maximization (pEM), that simultaneously anal
200 ctions of a single tumor, and we describe an expectation-maximization procedure for estimating the cl
202 modeling in ordinary Poisson ordered-subset expectation maximization reconstruction on quantitative
203 acquisition per bed position; ordered-subset expectation maximization reconstruction with at least 12
204 ed (18)F-FDG PET/CT studies (ordered-subsets expectation maximization reconstruction, CT attenuation
205 in list-mode time-of-flight ordered-subsets expectation maximization reconstruction, similar to the
206 earning mechanism, based around such spiking expectation maximization (SEM) networks whose combined o
209 to fit the proposed models by incorporating Expectation-Maximization steps into the extremely fast c
210 ore sequencer using M13 genomic DNA and used expectation maximization to obtain robust maximum-likeli
211 o deconvolute different effects, and employs expectation-maximization to iteratively estimate sgRNA k
214 e and multivariable analysis measured by the expectation maximization, weighted intensity, a priori i
215 0 frames, 3-6 s/frame, using ordered-subsets expectation maximization with 4 iterations and 32 subset
217 using a list-mode unrelaxed ordered-subsets expectation maximization with chronologically ordered su
218 those reconstructed using maximum-likelihood expectation maximization with nonuniform attenuation cor
219 the model parameters may be estimated using expectation maximization with only a very limited amount
220 on and Q.Clear (block-sequential regularized expectation maximization with point-spread function mode
221 del reduction, we created bursty Monte Carlo expectation-maximization with modified cross-entropy met
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